Allorhizobium ampelinum: Avi_6082
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Entry
Avi_6082 CDS
T00851
Name
(GenBank) transcriptional regulator GntR family
KO
K23466
GntR family transcriptional regulator, trigonelline degradation regulator
Organism
avi
Allorhizobium ampelinum
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avi03000
]
Avi_6082
Transcription factors [BR:
avi03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Avi_6082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_Crp_2
HTH_10
TrmB
Rrf2
HTH_24
HTH_IclR
HTH_27
HTH_5
MarR_2
HTH_11
HTH_CodY
EAP30
DUF6712
DUF5817_CT
TFIIE_alpha
MarR
HTH_41
Peptidase_M66
Motif
Other DBs
NCBI-ProteinID:
ACM39088
UniProt:
B9K2J0
LinkDB
All DBs
Position
2:1105129..1105821
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AA seq
230 aa
AA seq
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MTETIKVERPTKTLRELALEKVRDAIISGYFKPGDRLVERDLCAQLGVSRTVVREVLRHL
ESEGLVSNPQSKGPMVALLDVDEARQIYEIRAALEGMAARLCAERGDPAIVAGLSEALDA
IKGGYARQDMADVLKETTRFYETLFTRIDRQVAWGVVRQMTVRINHLRSMTIKTDGRATE
GPAQMQRIVEAIRNGDGPAAEQAAIDHVQRASSIAVAVLAQQARSAIEIE
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgacagagaccatcaaggtggaacgccccaccaagacgctgcgggaactggcgcttgag
aaagtccgcgatgcgatcatcagtggttatttcaagccgggcgaccggttggtcgagcgt
gacctgtgcgcgcagcttggggtcagccgaacggtggtgcgcgaagtgctgcggcatctg
gagtccgagggtctggtcagcaatccacagagcaaggggccgatggtggcgctactggat
gtggatgaagcccggcagatctatgaaatccgtgcggctttggaaggcatggcggcgcgg
ctttgtgcggagaggggtgatccggctattgtggctggcttgtcagaggcgctggacgcg
atcaagggtggctatgctcgccaggatatggctgatgtcttgaaggaaacgacgcgattt
tacgagaccttgtttacccggattgataggcaggtcgcctggggcgtggtgcggcaaatg
accgtgcggatcaaccatttgcgttctatgaccatcaagaccgatggccgggcgacggag
ggaccagcccagatgcaacggattgtcgaggcgatccgcaatggcgatggaccagccgcc
gaacaggcggcaattgatcacgttcagcgcgcctcctctatagccgtcgcggtgcttgcg
cagcaggcccgatccgccattgagatcgaatag
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