Allorhizobium ampelinum: Avi_7042
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Entry
Avi_7042 CDS
T00851
Symbol
hupT
Name
(GenBank) HNS-type DNA binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
avi
Allorhizobium ampelinum
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avi03032
]
Avi_7042 (hupT)
03036 Chromosome and associated proteins [BR:
avi03036
]
Avi_7042 (hupT)
03400 DNA repair and recombination proteins [BR:
avi03400
]
Avi_7042 (hupT)
DNA replication proteins [BR:
avi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Avi_7042 (hupT)
Chromosome and associated proteins [BR:
avi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Avi_7042 (hupT)
DNA repair and recombination proteins [BR:
avi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Avi_7042 (hupT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
ACM39777
UniProt:
B9K4H9
LinkDB
All DBs
Position
pAtS4e:complement(40213..40491)
Genome browser
AA seq
92 aa
AA seq
DB search
MTTTNEIADKIAANNGLTKVQAKGIVESVFKAIADAAGSDAETSIPGFGKFKVKTSPERE
GRNPATGEKMTVAASKKLTFAPAKALKDALNK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaccaatgaaatcgccgacaagatcgccgccaacaacggcctgacaaaggtt
caggccaagggcatcgtcgaatccgtgttcaaggccatcgccgacgccgcaggctccgac
gcggaaacgtcaatccccggtttcggcaaatttaaggtgaaaacatcacctgagcgcgag
ggtcgcaatcccgcgaccggagaaaaaatgactgttgcagcttcgaagaagctgactttc
gcgcctgccaaggccctcaaggatgcactgaacaagtga
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