Allorhizobium ampelinum: Avi_8027
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Entry
Avi_8027 CDS
T00851
Name
(GenBank) HNS-type DNA binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
avi
Allorhizobium ampelinum
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avi03032
]
Avi_8027
03036 Chromosome and associated proteins [BR:
avi03036
]
Avi_8027
03400 DNA repair and recombination proteins [BR:
avi03400
]
Avi_8027
DNA replication proteins [BR:
avi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Avi_8027
Chromosome and associated proteins [BR:
avi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Avi_8027
DNA repair and recombination proteins [BR:
avi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Avi_8027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Glycos_trans_3N
Integrase_Zn
Motif
Other DBs
NCBI-ProteinID:
ACM39563
UniProt:
B9K4B3
LinkDB
All DBs
Position
pTiS4:complement(27093..27371)
Genome browser
AA seq
92 aa
AA seq
DB search
MTTTNEIADKIASEQSLTRAQAKTIVESVFKHITDAALACAETSIPSFGKFKIKDTPERQ
GRNPATGATIKIAASKKLTFTPGKAVKDALNA
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccacaaacgaaattgctgacaagatcgcatccgagcagagcctaacaagggcg
caggccaagaccattgtcgaaagcgtctttaaacatatcactgatgctgctcttgcctgc
gcggaaacgtcgattccgtcgttcggcaaattcaaaatcaaggacactccggaacgccaa
ggccgcaatccggccacgggcgcaacgatcaagatcgccgcatcgaagaagctgaccttt
acacccggcaaggccgtcaaggatgcgctgaacgcatga
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integrated database retrieval system
