Apaloderma vittatum (bar-tailed trogon): 104267081
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Entry
104267081 CDS
T08559
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
104267081 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
avit04121
]
104267081 (RAG1)
Enzymes [BR:
avit01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104267081 (RAG1)
Ubiquitin system [BR:
avit04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104267081 (RAG1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1_imp_bd
RAG1_ZnH2
RAG1_RNase_H
RAG1_C
RAG1_pre-RNase_H
RAG1_ZnC2
RAG1
RAG1_DNA-bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
TasA_anchor
Motif
Other DBs
NCBI-GeneID:
104267081
NCBI-ProteinID:
XP_009873118
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MSVTSQMDVPEEIQHPYTKFSEWKFKLFKVRPSEKTPSDDGQPINKDQAEEVTSSNTEII
LRNDEAVPGGEKMDLMGNRQALEKDASDVRAQDNEAHQNNLKQLCRICGVSFKTDCCKRT
HPVHGPVDEETLWLLRKKEKTATSWPDLIAKVFKIDVRGDIDTIHPTRFCHNCWSIIHRK
FNNTPCEVYFPRNSTMAWQPHSPNCDVCHTTGRAVKRKSQAPGVQHAKRVKTVAESARIN
RGLKNQAQINNKNLMKEVVSCKNIHLSTKLLAVDYPVDFIKSISCQICEHILADPVETTC
RHLFCRTCILKCLKVMGSYCPCCWYPCFPTDLVTPVKSFLNILDSLGIRCPVKECDEEVS
YGKYGQHLSSHKEMKDRECYSHINKGGRPRQHLLSLTRRAQKHRLRELKRQVKAFAEKEE
GGDIKAVCMTLFLLALRAKNEHRQADELEAIMQGRGSGLHPAVCLAIRVNTFLSCSQYHK
MYRTVKAVTGKQIFQPLHALRTAEKALLPGYHPFEWKPPLKNVSTNTEVGIIDGLSGLPL
SIDEYPVDTIAKRFRYDAALVCALKDMEEEILEGLKAKNLDDYLNGPFTVVIKESCDGMG
DVSEKHGSGPAVPEKAVRFSFTVMNIAVAHGNESKRIFEEVKPNSELCCKPLCLMLADES
DHETLTAVLSPLIEEREAMKNSELLLDVGGILRTFKFIFRGTGYDEKLVREVEGLEASGS
TYICTLCDATRLEASQNLVFHSITRSHAENLERYEIWRSNPYHESVDELRDRVKGVSAKP
FIETVPSIDALHCDIGNATEFYRIFQMEIGEVYKNPDASKEERKRWQLTLDKHLRKKINL
KPMMRMSGNFARKLMSKETVEAVCELIKCEERHEALKELMDLYLKMKPVWRSSCPAKECP
ELLCQYSYNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASEGNES
GNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHKTLKSQGLTIDPEDSSG
DPVPLEILESNDSAEP
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtaacatcacaaatggacgtgcctgaagaaattcagcatccatacaccaaattt
tctgaatggaaattcaagctgtttaaagtgcgaccatctgaaaaaacaccttctgatgat
ggccagcccataaacaaagatcaggcagaagaggtcacttcttcaaacacagaaatcatc
ctgcgtaacgatgaagcagtgccagggggagaaaagatggacttgatgggcaacaggcag
gcacttgagaaagatgccagtgacgtgagagcacaagacaatgaggctcatcagaacaat
ttgaagcaactttgccgcatctgtggagtttcatttaaaaccgattgctgcaagagaact
catccagtgcatgggccagtggatgaggaaactctgtggcttctgagaaagaaagagaaa
acagcaacctcttggccagatcttatcgctaaagtttttaagatcgatgtgcgaggggac
attgataccatccatcctactcgattttgtcacaactgctggagtattatccatagaaaa
ttcaataatactccgtgcgaagtgtattttcctaggaacagcacgatggcgtggcaaccc
cattccccaaactgcgacgtgtgccacacgactggtcgcgcagtcaagaggaaaagccag
gcacccggcgtacagcatgccaaacgcgtaaagactgttgcggaatctgctcgaataaat
agaggcctaaagaaccaagcacagataaacaacaagaacttgatgaaagaggttgtcagc
tgcaagaatatacatctcagcaccaagctgcttgcagttgattacccagtagatttcatt
aaatccatctcttgccagatctgtgagcatattttggcagatccagtggaaacaacatgc
agacacttgttttgcagaacctgcatcctgaaatgtctcaaggttatgggcagctattgc
ccctgctgctggtatccctgctttcctacagatctggtaaccccagtgaaatccttcctg
aacattctcgatagcctggggataagatgtcctgtcaaggaatgtgatgaagaagtctcg
tatggaaaatatggccaacacctttccagccacaaggagatgaaagatagagagtgctac
agccacataaataaaggtggccgaccaaggcagcacctcctctctttgaccaggagagct
cagaaacaccgtctgagggaactgaagcgtcaggtcaaggcttttgctgaaaaagaggag
ggtggcgatataaaggctgtatgcatgacattgttcctgctcgctttaagagcgaaaaat
gagcacagacaagcagatgaactggaggctataatgcaagggaggggatccgggcttcac
cctgctgtctgcctggcgatacgagtcaacacgttcctcagctgcagccaatatcataaa
atgtacagaacggtaaaagctgtcaccgggaagcagatcttccagcctttgcatgctctt
cgcactgctgagaaagccctcctgccaggttatcacccattcgaatggaaacctcctttg
aaaaatgtatccactaacacagaagtgggaattatagatgggctatcaggattaccgctc
tcaattgacgaatacccggtggacacgattgcgaagagatttcgatacgacgcagccttg
gtttgtgccttaaaggacatggaggaggagatcttggaaggcctgaaagcgaaaaacctg
gatgactatttgaacggtcccttcactgtggtaataaaagagtcttgtgatggaatggga
gatgtcagcgagaagcacggaagcgggcctgcggtcccagagaaggctgtccgcttttcc
ttcacagtcatgaacattgctgtagcacatgggaacgagagcaagaggatctttgaagaa
gtcaaacccaactcagagttgtgttgcaagcccttgtgccttatgctggctgacgaatcg
gatcacgaaactctgacggcagtcctgagccccctcatagaagaaagggaggctatgaaa
aacagtgagctgctgcttgatgtgggaggcatcctgagaacattcaaattcatctttagg
ggtacagggtatgatgagaaactggtgcgggaagtcgaagggcttgaggcctcaggttcc
acttacatttgcaccctgtgcgacgcaacccgtctagaggcgtcccagaatttggtcttc
cactccataaccaggagccacgctgaaaatctggagcgatatgaaatatggaggtccaac
ccgtatcacgaatctgtcgacgagctccgtgacagagtgaagggtgtttcagccaaacct
ttcattgagactgttccctccatagatgcgttgcactgcgacatcggcaacgcaaccgaa
ttctaccgcattttccagatggagatcggtgaagtttacaagaatcccgatgcgtctaaa
gaagagaggaagaggtggcagttgactcttgacaaacacctcaggaagaagatcaacttg
aagcctatgatgaggatgagtgggaattttgctagaaagctcatgtccaaagagacagtg
gaggcagtgtgtgaattaataaagtgtgaggaaaggcacgaagccctgaaagaactaatg
gacctctacctgaagatgaagccagtgtggcgatcctcatgccctgccaaggagtgtcca
gaattgctgtgccagtacagctacaattcgcagcgttttgctgagctcctatctacaaag
ttcaagtacagatatgagggaaagattacaaattatttccacaagaccctcgctcatgtt
ccggaaatcattgaaagagacgggtccatcggggcctgggcaagtgaaggaaatgagtct
ggaaacaaactgtttaggaggttccgaaaaatgaatgccaggcagtccaaatgctacgag
atggaggatgtcttgaagcatcactggctatatacctctaagtacctccagaagttcatg
aatgctcacaaaacattaaaaagccagggcctgaccattgatccagaggatagttcgggt
gaccccgtgccactagagatcttggaaagcaacgattcggcagaaccctga
DBGET
integrated database retrieval system
