Apaloderma vittatum (bar-tailed trogon): 104267143
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Entry
104267143 CDS
T08559
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104267143 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avit03021
]
104267143 (POLR1B)
Enzymes [BR:
avit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104267143 (POLR1B)
Transcription machinery [BR:
avit03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
104267143 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
PBP_GOBP
Motif
Other DBs
NCBI-GeneID:
104267143
NCBI-ProteinID:
XP_009874100
LinkDB
All DBs
Position
Unknown
AA seq
1011 aa
AA seq
DB search
MPQGTIKQPLGYIPIMVKSKLCNLYNLSLQELVVHHEEEEEMGGYFIINGLEKVIRMLIM
PRRNFPLAMTRHKWKNRGPGFTEYGVVMHCVKDEHTAINMNLHYLENGCVMLNFIFQKEL
FFLPLGFALKALVNFPDYQIFEELVKEKEGDTFYVNCVTEMMRAVVDAGCLTQQNVLEYL
GKSFRVKLNLPEWYSNEQAADFILNKCICIHLTNRTEKFYLLCMMTRKLYTFAKGECMED
NPDSLMNQEVLTPGQLFLMFLKERLESWLQSVKFVLEKRTEKVDINLNADSLVKAFSLAT
DVTKPFEYLLATGNLRSKTGLGMLQDSGLCVVGDKLNFIRYLSHFRCIHRGGAFSQMRTT
TVRKLLPESWGFLCPVDTPDGEPCGLMNHMTAVCEIVTEMVPTTDIPLLLCSLGVTPVDA
TPSKPYAECYKVVLDGSVVGWVEQELAPEIAETLRRFKITQEKRFPARAEVVLIPMTGKP
SLYPGLFIFTTPCRMVRPVRNLFYGRNEWIGTLEQIFMNVASLESEVVPGKTTHQELFPH
SILSVVANLIPFSDHNQSPRNMYQCQMGKQTMGFPVYNYKDRSDNKLYHLHTPQSPLVRP
SMYDYYGMDSYPVGTNSIVAVISYSGYDMEDAMIVNKSSWQRGFAYGSVIKMESIDLSLK
ASRSGDNLVFGVKPGDPNVTGKLDADGLPFVGSILQPGDPFYSFMNLSTGETFTVYYPNK
EVGIVDNIRLCSNDRGTGKFKKVCITVRVPRNPTVGDKFASRHGQKGILSQLWPIEDMPF
TENGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGISYDATPFTFTEKNSALKYFGE
TLVSAGYNFFGTEKMYSGISGLELEAEIFVGVVYYQRLRHMVSDKFQVRTTGPRDTLTNQ
PIKGRNVEGGIRFGEMERDALLAHGTSFLLQDRLFNCSDGSVAYVCTSCGSMTSPVLEKP
AHSSSVTSNRRYSCSVCNEVDAIEIVPVPHVFRYFVAELAAMNIKTKLNVE
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagggactattaaacagcccttggggtatattccaatcatggtgaagtccaag
ttgtgcaacctctataatctttctctacaagaactcgtagtgcaccatgaggaggaagag
gaaatgggaggctactttataattaatggcttagaaaaagttattaggatgctgattatg
cccaggcgaaatttccctcttgcaatgacaagacacaagtggaaaaacagaggccctggt
ttcacggagtacggagtagtgatgcactgcgttaaggatgagcacactgcgataaatatg
aaccttcactacttggaaaatggttgcgtcatgttgaatttcattttccagaaagagttg
ttcttccttcccttggggtttgctctgaaagcactagttaatttcccagactaccagata
tttgaagagttggtcaaagaaaaggaaggtgacaccttctacgtgaactgcgttactgag
atgatgagagcggtagtggatgcaggctgtcttacacagcagaacgtcctcgaatacctg
ggaaagagcttcagagtaaaacttaaccttcctgagtggtacagcaatgaacaggctgca
gatttcattttgaacaagtgtatctgcatacacttgacaaacagaaccgagaagttttac
ctgctctgtatgatgacacgaaagctgtacacttttgccaaaggggagtgcatggaggat
aatccagacagtctgatgaatcaagaagtgcttaccccaggacagcttttccttatgttc
ttaaaggagaggcttgaaagctggttgcaatctgttaagttcgttttggaaaaaagaaca
gagaaggtagatatcaacctaaatgcagacagcttggtgaaggcattcagcctggcaaca
gacgttaccaaaccgtttgagtatcttcttgcaactggtaacctgcgatctaaaaccggc
ctgggcatgctacaggacagcggtctgtgtgtggtgggagacaagctgaacttcattcgc
tacctttcccacttccgctgcatacacagaggaggagcgttttcccagatgagaactaca
actgtccgcaagctgctgcccgaatcctgggggttcctgtgccctgtggataccccagat
ggagaaccctgcggcctgatgaaccacatgacagctgtgtgtgaaatagtgacggagatg
gtgcccacaacagacattccgcttttgttatgctccctgggtgtcacccccgttgatgcg
actccaagcaagccttatgcagagtgttacaaagtagtgttggatggctctgtggtgggc
tgggtagagcaggagctggctcctgagatagcagaaaccctccgccgtttcaagataaca
caagagaagagatttcctgcacgggcagaagtggtccttatcccaatgacgggaaaaccc
agtctgtatcccggcttgttcatttttactaccccttgccggatggtgcggcctgtcaga
aacctgttctatggaaggaatgaatggatcggtactctggaacagatcttcatgaacgtg
gcctcgctggagtcagaggtggtgcctggaaaaaccactcatcaggagctcttccctcac
agcatcctgagcgtggtggccaacctcatccccttctctgaccacaaccaaagtccacga
aacatgtaccagtgccagatgggaaagcaaaccatggggtttccagtttataactacaag
gaccgctcagataacaagctgtaccaccttcacacgccccagagccctctggtgcggccc
agcatgtatgactactatgggatggacagctacccagtcggcaccaattctattgtggct
gtcatctcctacagcggctatgacatggaagatgcaatgattgtgaacaaatcttcctgg
cagagagggtttgcctatggaagcgttatcaagatggagagcattgacctttcccttaaa
gccagcaggtcaggtgataatttagtgtttggtgtcaagcctggtgatccgaacgttacg
gggaagttggatgccgatggactgccttttgttggctctatcctgcagcctggggacccc
ttctacagcttcatgaacctcagcacaggggagactttcactgtgtactatccgaataag
gaagttggcattgtggacaacatcaggttgtgcagtaatgaccgtggcactgggaaattc
aagaaagtttgcatcacagtgagggttcctcgaaatccaactgtcggagacaaatttgcc
agccgtcatggacagaagggtatcctgagccagctctggccgattgaggatatgccgttc
acggagaacgggatggttccagacatcctcttcaaccctcacggctttccctcccgtatg
accatcgggatgttaatcgagagcatggctgggaagtcggcagcgctgcacggcatctcc
tacgacgccactcccttcaccttcacggaaaagaactccgctttgaaatacttcggcgag
actttagtgagcgcgggttataacttctttgggacggaaaagatgtacagcggcatcagc
ggcctggagctggaggcagagatctttgtgggagtggtgtactaccagcgcctgcgccac
atggtctcagacaagttccaggtgagaacaacagggccccgagacactcttaccaaccag
cccatcaaggggaggaacgtggaaggtgggattcgcttcggcgagatggagcgtgacgct
ctgctggctcacggcacgtctttcttgctgcaagaccgcctgttcaactgctccgatggc
tccgtagcctatgtctgcacaagctgcggcagcatgacctcccctgtgctggagaaacca
gcacactcctcctctgtgacgagcaacaggaggtactcctgctctgtctgcaacgaggtg
gatgccatcgagattgtccctgtgccccatgtcttccgttactttgtggccgagttggca
gccatgaacataaaaacaaaactcaacgtggagtag
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integrated database retrieval system
