Apaloderma vittatum (bar-tailed trogon): 104267169
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Entry
104267169 CDS
T08559
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104267169 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
avit03036
]
104267169 (ERCC6)
03400 DNA repair and recombination proteins [BR:
avit03400
]
104267169 (ERCC6)
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104267169 (ERCC6)
DNA repair and recombination proteins [BR:
avit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
104267169 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
TFIIF_beta
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
104267169
NCBI-ProteinID:
XP_009876532
LinkDB
All DBs
Position
Unknown
AA seq
1034 aa
AA seq
DB search
KWQKERMKDKEHQTSEELSEESDTEFEEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAG
GILGDEMGLGKTIQIIAFLAGLSYSKLRTRGSNYRYQGLGPTVIVCPTTVMHQWVKEFHT
WWPPFRVAVLHETGSYTNRKVKLIDEIASCHGILITSYSYIRLMQDNIHSYDWHYVILDE
GHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQF
SVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKADVKMSLSLPDKNEQVLFCR
LTDEQRQVYQNFINSKEVYQILNGDMQIFSGLVTLRKICNHPDLFSGGPKILKGVPDADI
EEADQFGYWKRSGKMIVVESLLKIWHKQGHRVLFFTQSRQMLQILEVFVKDRNYSYLRMD
GTTSIASRQPLITRYNEDKSIFIFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARE
RAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFT
LSSPDVSQKTETSAIFAGTGSEVQVPKRHLKQKLEKQPDNDTSKGDLHLTESSSPKYSRS
SNSYTTTHMTNCSSKAIETSEEVQGSLEAFENSYAKENTEAATTINSLNKSKEESLEEDK
SMSLPLPGDAGSSENAKCLSAEVAEVHGAANANVEGDFSLTCGAAGSWEKQVAKAEDGQL
DNTHYKCTSKTKHRVDMLSHESHKDKSKKKHHKDAKFEGERIPHLVKQKRYRRENSEEKE
EDSKKTDDYVLEKLFKKSGVHSVMKHDAIMEASSADHVLVEAEANRVAQDALRALKVSRQ
RCLGAASGVPTWTGTTGFSGAPSGIKSRFGQKRNPMLLSSRSTCASPVKKCKDADTVKKE
KVKKSNSDGHFDGKSGESSSSALDSSSLLAKMRARNHLLLPQQRVNEGDENHQQPPTPAP
GSTEYDELLVDMRNFIAFQARVDGEASTRELLNEFESKLPVAQSCVFRELLRNLCTFHRN
PNGEGVWKLKPEFR
NT seq
3106 nt
NT seq
+upstream
nt +downstream
nt
gaagtggcaaaaagaacgtatgaaagacaaagaacatcaaacatctgaggaactttcgga
agaaagtgacactgaatttgaagagggtttcaaagtaccaggatttctcttcaaaaagct
ttttaagtaccagcagacaggtgttaggtggctctgggaattgcactgccagcaggcagg
aggaattctgggagatgagatgggattgggcaagaccatccagataattgccttcttggc
aggtctgagctacagcaagctcaggactcgtggttcaaattacaggtaccagggattggg
tccaacagttatagtttgtccaactactgtcatgcatcagtgggtaaaagagttccacac
ttggtggcctccatttagggtcgctgttcttcatgaaactggttcttacaccaacaggaa
ggtgaaactaattgatgagattgcttcatgccatggaattttaattacatcttattcata
cattcgactgatgcaggataacatccacagctatgactggcattatgtgattctggatga
gggtcacaaaattcgaaatccaaacgctgcagtcacacttgcatgcaagcagttccgcac
accccatcgaatcatcttgtctggctctcctatgcaaaataacctaaaggagctctggtc
cctctttgactttgtattcccagggaagctgggaacattgcctgtgttcatggagcaatt
ttctgttccgataaccatgggaggatattccaatgcctctcctgtccaggtaaaaactgc
atacaaatgtgcctgtgtgttacgggacaccataaacccctatttgctgcgcagaatgaa
ggctgatgtaaaaatgagcctttcacttccagataagaatgaacaggtcctcttttgccg
tttgacagatgaacagcgtcaagtctatcaaaatttcatcaactctaaagaagtttacca
gattctcaacggagacatgcagattttctcaggactagtaactttaagaaagatttgcaa
ccaccctgacctcttttctggtggtcccaagattttgaagggtgtaccagatgctgacat
agaggaagcagatcagtttggatactggaaacgttctggaaaaatgatagtggtagaatc
cttgctgaaaatatggcacaagcaaggtcacagagtgctgtttttcactcagtcaaggca
gatgctgcagatacttgaagtctttgtgaaagacagaaattattcctacctcaggatgga
tggcaccacatctatagcttccaggcagccccttataacaagatacaatgaggacaaatc
catatttatttttcttctaacaactcgtgttggtggcattggagttaacttgactggtgc
tgaccgggttattatttatgatcctgactggaatcccagtacagacacacaggctcggga
acgtgcttggagaataggccaaaagaaacaggtgactgtgtacaggcttctcacggcagg
tactattgaagagaagatataccacaggcaaatcttcaaacagtttttaacgaacagagt
gctgaaagaccctaagcagaggcgctttttcaaatccaatgacctgtatgaactttttac
tctgagcagcccagatgtgtctcagaaaactgaaacaagtgcaatttttgcaggtactgg
ttcagaagttcaagttccaaaacgccatttgaaacagaaacttgaaaagcaacctgataa
tgacacttctaaaggtgatctccatcttacagaaagcagctcaccaaagtacagcagatc
atccaattcctacacaaccacccacatgacaaattgttcttctaaagcaatagagaccag
tgaggaagtccaaggaagtttggaagcctttgaaaatagctatgcaaaagaaaatacaga
agctgctactactataaattcattgaataaaagcaaggaggaaagcttggaagaagacaa
atctatgtccctgccattgccaggtgatgcagggtcttcagagaatgccaaatgtctgag
tgctgaggtggctgaagtacatggagcagctaatgcaaatgtcgagggagattttagcct
tacatgtggtgcagctggctcttgggaaaagcaggtggctaaagctgaagatgggcaatt
agataatactcattataaatgtacttcaaaaacaaagcacagggtggatatgctgtcaca
tgagagtcacaaagataaatctaagaagaaacatcacaaagatgccaaatttgaaggaga
gcgcattcctcatctagtgaaacaaaagcgatacagaagggagaatagtgaagagaagga
ggaagactcaaagaaaactgatgattatgtcttggaaaaacttttcaaaaagtcaggggt
acacagtgttatgaagcatgatgccattatggaagcttctagtgcagatcatgtgctggt
ggaagcagaagcaaacagagtggcacaggatgccttaagagccttaaaagtctctcgaca
gcgctgtttaggagctgcttctggtgtgccaacctggacaggcacaactggtttttcagg
tgcaccatcaggaataaagagtcgatttggtcaaaaaagaaaccccatgctgctttcatc
acgttccacttgcgcatcacctgtgaagaagtgcaaggatgcagatacagtaaagaaaga
aaaggtaaagaagtctaattccgatgggcactttgacggaaaatcaggagaatcatcatc
cagtgcactagactcatcatctttacttgctaagatgagggcaagaaaccaccttctttt
accacaacagagagtgaatgagggagatgaaaatcatcagcaaccacccaccccagcccc
aggttcaacagaatatgatgaactgctcgtggatatgcgtaacttcatagcgttccaggc
ccgtgtggatggcgaggccagtactcgggaactactgaacgagtttgagtccaaactgcc
agtagcacagtcctgcgtctttagagaacttctccgcaatctctgcaccttccacaggaa
cccgaatggtgaaggtgtctggaagctaaagccagaattccgctga
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