Apaloderma vittatum (bar-tailed trogon): 104267475
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Entry
104267475 CDS
T08559
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
avit04812
]
104267475 (KATNB1)
Cytoskeleton proteins [BR:
avit04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
104267475 (KATNB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Katanin_con80
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
WD40_RFWD3
RMC1_N
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
104267475
NCBI-ProteinID:
XP_009863394
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
GHTEAVRCLRFSPDGKWLASAADDHTVKLWDLAAGKIMFEFTGHTGPVNVVEFHPNEYLL
ASGSSDRTVRFWDLEKFQVVSCIEEETTPVRCMLFNPDGCCLYSGFQDSLHVYGWEPERC
FDVVLVNWGQVADLSICNSQLIGVSSAQSTVSSFVVDLGRVTKSDSVPHGLIRDDKPLVP
PTATGSSLRRIYDRPSTTCSKPQSRVKHNSESERRSPSSEDDRDEKESKAEIQNPEDYKE
IFQPKNAICRTPPRNNEPFPAPPEDEAVAAKEAAKPSQAADVQSALPKQELPDPVQRPPI
AASTPLARTEPSVIPAARNEPIGLRASDFLPAVKNQSQTELVDEEAMSQIRKGHETMCVV
LTSRHKNLDTVRAVWSTGDIKNSVDSAVAINDLSVVVDLLNIVNQKASLWKLDLCTIVLP
QIEKLLQSKYESYVQTGCTSLKLILQKFLPLITDILPQIPDILAAPPSIGVDITREERLH
KCKLCYKQLKNISNIVKNK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
ggtcacacggaagcagttcggtgtctccgctttagtcccgatggcaagtggttagcctct
gctgctgatgatcacaccgtgaagctgtgggatctggctgctgggaagatcatgtttgag
tttacggggcatactggcccagtaaacgtcgttgaattccaccccaacgagtaccttctg
gcttctggcagctccgacaggactgttcgattctgggacctggagaagtttcaggttgtg
agctgtattgaagaggagactactcccgtcaggtgcatgctcttcaacccagacggctgc
tgcttgtacagcggcttccaggactcgctgcacgtgtacggctgggagccagagcgctgt
ttcgacgtcgtcttggtgaactggggccaagtagccgacttatctatatgcaacagccag
ctgataggagtttcctctgcgcaaagcacagtctcttccttcgttgtggatctcggcaga
gtcacaaagtcggattctgttcctcacgggctgatcagggacgacaagcctctcgtaccg
ccaacagccacggggtcctcccttcgccgcatctacgacaggccctccactacctgcagc
aagccccaaagcagagtgaagcacaactcggagagcgagaggcgcagtcccagcagtgaa
gacgaccgggatgagaaggaatcaaaggctgagatccagaacccagaggattacaaagag
atcttccagcccaagaacgccatctgtcgaactcctcctcgaaacaacgagcccttccca
gcccctcctgaggacgaggctgtcgctgcgaaggaagcggccaagcccagccaagctgct
gatgtccagagcgcgttgccaaagcaggaactgcctgatccggttcagaggccaccgatt
gctgcctcgacccctttggccagaacggagccgtcggtgattcctgcagccaggaatgag
cccattggcctgagggcctctgactttctgccagctgtgaaaaaccaaagccaaaccgag
ctcgtggacgaggaagccatgtcccagatcaggaaaggccacgagaccatgtgtgtagtg
ctcaccagccgccacaagaacctggacaccgtgcgagccgtctggagcaccggcgacatc
aagaactctgtggactctgcggtggccatcaacgatctctccgttgtcgtggacctcttg
aacattgtcaaccaaaaagcgtctctctggaagctggatttgtgtactatagtcctgccg
cagattgaaaaactgctccagagtaaatatgaaagttacgtgcagactggctgcacctcc
ctgaaactcattctccagaaattcctgccactgatcactgacatcctgccacagatccct
gacatcctcgcggcgccgccttccatcggagtggacatcaccagagaagagaggctacac
aaatgcaagctgtgctacaagcagctgaagaacatcagcaacatcgtcaagaacaaa
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