Apaloderma vittatum (bar-tailed trogon): 104267635
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Entry
104267635 CDS
T08559
Symbol
TSC1
Name
(RefSeq) hamartin isoform X1
KO
K07206
tuberous sclerosis 1
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04140
Autophagy - animal
avit04150
mTOR signaling pathway
avit04218
Cellular senescence
avit04910
Insulin signaling pathway
avit05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
104267635 (TSC1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104267635 (TSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hamartin
Motif
Other DBs
NCBI-GeneID:
104267635
NCBI-ProteinID:
XP_009863061
LinkDB
All DBs
Position
Unknown
AA seq
1157 aa
AA seq
DB search
MAQQGNVGELLSMLDSPILRVLEDVTTVFKDNLICDRGPMLVNSLVDYYLETNSQQALHI
LSTLQEPHDKHLLDKINEYMGKAATRLPTLSLLGHVIRRQPSWKHKLSQAPLLLSLLKCL
KTDTDVVVLTTGVLVLITMLPMIPQSGKQYLHDFFGIFGRLSAWCLQNPGHVAEIYLVHL
HASVYALFHRLYGMYPCNFVSFLRSHYSMKENLETFEEVVKPMMEHVRIHPELVTGSKDH
ELDPRRWKRLETHDVVIECAKISLDPAEASYEDGYYSVSRKLCTSLKHHQTDPSASYYID
TQSSYGTSTPYSTPRLTLSQIPGQLPQILSPQSIRLSTEPQQVTIWSPSAVCGMTTPPTS
PGIVPSDSSQSASQPYSKAFGTSAGGKGTPLGTPATSPPPCTSDDFVHVSLPSAAATPPK
KEDKPDPGRPLLYRQQNVINSDKSLDTPGSKSSVTLSDLPEFLGGLSFEDSAEKDREEDA
ISKEISEITTDAEHMVPRGGFDSPFYRTNESLPGSQKKTHSVVSSVQGHSQTSEPLTSSL
DKPGPESARETPKQTFTPIDKPFGGSAESPAGNREGTSGETSILTPSPCKVPAQRRAVFG
SGQPPLYEHLFEVALPKTAYLFVGKKTEELLKKAKGTQDDDCMSSTSPVEVLDRLIQQGA
DAHTKELNKLSLPSKSADWTHFGGSPPSDEIHTLRNQLLLLHNQLLYERFKRQQHALRNR
RLLRKVIKATALEEHNAAMKDQLKLQEKEIQALKVSLQKEQARYHQFQEEHENIVAQLHS
QIRQLQHDREEFYNQSQELQTKLEDCRNMIADLRLELKKANNKVCHNELLLSQVSQKLSN
SESVQQQMEFLNRQLLVLGEVNELYLEQLQHKHTDTTKEVEMLHAAFRKELEKAKLCVQQ
QSQRLDASQKRIAELESQLAKKDHLFLEQKKYLEDVKIQARGQLQAVESRYKAQKRITQA
FELEILDLFGRLEKSSLLKKLEDDKTEAAEAAEERLDGGNEDTVAGYSEETIGRNGETKP
PSTRGSSSSKGGSSSSELSTPEKPQNQRFSSRWEASVLLEPSTTVPLTVGSLPSSKSFLG
MKARELFRNKSESQCDEEGVTVNRLSDALKTELCKDPSMETKAPLSPDNLSLSPKIQESS
VGQLHIMDYNETHHDHS
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcaaggaaacgttggtgagctcctctcaatgctggattctccaattctgcgt
gtcctggaagatgtaacaacggtgttcaaagataatctcatttgtgaccgtggacctatg
cttgttaacagcctggtggactattacttggaaaccaattctcagcaggcactgcatata
ctgtccacgctgcaagagcctcatgacaagcatctactggacaaaattaatgaatatatg
ggcaaagctgctacccgtttacccactctctctctgctgggacacgtgataagacgacaa
ccatcttggaagcataagctctctcaagcacctctcctgctttcattacttaaatgtctc
aagactgacacagatgtagtagtactcaccacaggtgtcctagtgctaataaccatgttg
ccaatgattcctcagtctggcaaacagtaccttcatgatttctttggtatctttgggcgt
ctctcagcctggtgcttgcagaatccaggtcacgtggcagagatttatcttgtccatctt
catgccagcgtttatgctctctttcatcgtctttatggaatgtatccttgcaattttgtc
tcctttctgcgttctcactacagtatgaaggaaaacttggagacctttgaagaggtagtc
aagccaatgatggaacatgtgcgaattcatccagaattagtgactggatctaaggaccat
gaactggacccacgaaggtggaaaagactagaaactcatgatgttgtgatagaatgtgcc
aaaatctccctggaccctgcagaagcctcatatgaagatggctattactctgtgtctcgg
aaactctgcacaagcttaaaacatcatcaaactgaccccagtgccagctattacattgac
acacagagcagctatgggacttctaccccatattccactcctcggctaacactatcacaa
ataccagggcagctacctcagattctgagcccgcagtcgatacggctgtcaactgagcca
cagcaggttaccatctggagtccttctgcagtttgtgggatgaccactccgccaacctcc
cctggaattgtcccatcggattcatcccagtctgcatcacaaccttacagcaaagctttt
ggcacatctgcaggggggaaaggaacacctttgggaacaccagccacgtctcctccaccc
tgcacttcagatgacttcgtgcatgtttcactcccttctgctgctgccacacctcctaaa
aaggaggacaaaccagatcctgggaggcctttactgtaccgacagcaaaatgtcataaac
agcgataaatcattggacacacccggtagtaaaagttcagtaaccttaagtgatcttcca
gagtttttaggtggtttgtcttttgaagatagtgctgaaaaggacagagaggaagatgca
atatctaaagagatctccgagatcacaaccgatgctgaacacatggtgcctagaggagga
tttgactctccgttttaccgcacaaatgaaagtctgccaggctctcaaaagaagacccat
tcggtagtctctagtgttcagggacacagtcagacctctgagcctttaacatcttctctg
gacaagcctgggcctgagagtgcgcgggaaacacccaaacaaacatttactcccatagac
aagccctttggaggctctgctgaaagccctgctggtaacagggaaggaacctctggggag
acgagtattctcactcccagcccttgcaaagtaccagcgcaaagaagagcggtgttcggg
agtgggcagcctcccctgtacgagcacctttttgaggtcgcgttaccaaagactgcctac
ctctttgttggcaagaagactgaagagctgctaaagaaagccaagggaactcaggatgat
gactgcatgtcctcgacttctcccgtggaagtactggacaggctgatacagcaaggagcg
gatgcacacactaaggagctgaacaaattgtctctgccaagcaaatctgctgactggact
cactttggaggttctcccccttcagatgagattcacacgctgcgtaaccaattgcttttg
ctgcacaaccagttactgtatgaacgcttcaaaagacagcaacatgcccttcggaaccgg
cgactgttgcgaaaagtgattaaagccacagctctggaggagcataatgctgccatgaaa
gatcagctgaaactacaggagaaagaaatccaggccttgaaagtaagtctgcagaaagaa
caggcaaggtaccaccagtttcaggaggaacatgaaaatatagtggctcagcttcacagc
cagatcagacagctgcagcatgaccgggaggaattctacaaccagagccaggaattgcag
accaagctggaagactgccggaatatgattgcagatctgaggttagaattaaagaaggct
aacaacaaggtgtgtcacaatgaattgcttcttagccaagtttctcaaaagctttccaac
agcgagtctgtgcaacagcagatggagttcttgaacaggcagctcctggttcttggagag
gtcaacgagttgtacctggagcagctgcagcacaagcacacagacactacaaaggaggtt
gaaatgttgcacgctgcttttcggaaagaactggagaaagcaaaattgtgtgttcaacag
caaagccaaaggcttgatgcttcccagaaacggatagctgaactggaatctcagcttgct
aaaaaggaccacctcttcctggagcaaaagaaatacctggaagatgtcaaaatccaagca
cgaggtcagctacaagcggtagaaagtaggtacaaggcccagaaaagaatcacacaggca
tttgagctggagatcttggatctgtttggccggctggagaagagcagcctactgaaaaaa
cttgaagatgataaaacagaagcagctgaagcagcagaagagaggctggacggtggtaat
gaagatactgtggcgggatacagtgaagaaacaattggtagaaatggagagaccaaacct
cccagcacacgaggtagtagtagcagtaagggtggcagcagcagcagtgagctctccacc
ccagaaaaaccccagaaccagagattcagcagtcgttgggaggcatctgtgttgctggag
ccctcgactactgtcccactgactgtaggttcactccccagctccaagagcttccttgga
atgaaggcgcgagaattatttcgcaacaagagtgagagccagtgtgatgaggagggtgta
accgtcaacaggctctctgatgctctaaagactgaactgtgtaaagatccaagcatggag
acaaaggcccctctgagccccgataaccttagcctctcgcctaagatccaggaaagcagt
gttggacagcttcatatcatggactacaacgaaactcatcatgaccacagttaa
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