Apaloderma vittatum (bar-tailed trogon): 104267716
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Entry
104267716 CDS
T08559
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
avit03009
]
104267716 (DDX55)
Enzymes [BR:
avit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104267716 (DDX55)
Ribosome biogenesis [BR:
avit03009
]
Eukaryotic type
Pre-60S particles
Helicases
104267716 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
MuF_C
SHOCT
AAA_22
SurA_N_3
Motif
Other DBs
NCBI-GeneID:
104267716
NCBI-ProteinID:
XP_009868470
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MNNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKMQVGAVIITPTRELAIQIDEVLS
HFTKHFPTFSQILLIGGRNPMEDVEKFKEQGGNIIVATPGRLEDLFRRKADGLDLATCVK
SLDVLVLDEADRLLDMGFEASLNTILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRI
SVKEKGVAASNTQKTPTRLENYYMICKADEKFNQLVHFLKQHKQEKHLVFFSTCACVEYY
GKALESLIKQVKIMSIHGKMKHKRNKIFTEFRKLPGGILACTDVMARGIDIPEVHWVLQY
DPPSSASAFVHRCGRTARIGNVGSALVFLLPMEESYVNFLSINQKCPMQEMKPQTNVLDL
LPKLKSMALADRAVFEKGMKAFVSYVQAYAKHECNLIFRIKDLDFASLAKGFALLKMPKM
PELRGKCFPDFTPVTVNTDSISFKDKNREKQRQKQLEQQRKEREENGGKKKFIKNKAWSK
QKAKREKKKKITAKRKREEGSDIEDEDMEELLNDTRLLKRLKKGKISEEEFEKRLTGSQK
RLNVETVADLESEG
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaaagatgttgctgcggaagccgtaacaggcagcggcaaaaccttagcgttt
gtgattcccatactggaaattcttctcaggcgtgaagaaaaattaaagaaaatgcaggtt
ggagctgtaattatcacaccaacgagagaattggctattcaaattgacgaggtgctgtca
catttcacaaaacacttccccacatttagtcagattcttttaattggtgggaggaatccc
atggaagatgttgaaaaatttaaagagcagggcgggaacatcattgtcgcgacaccgggc
cgcctggaggatctgttcagaagaaaagcagatgggctggatctggcgacctgtgtgaag
tctcttgatgtgttggtgttggatgaagcagacagacttctagatatgggctttgaggcc
agtttgaacaccattctggacttcttgcccaagcagaggcgtacaggtctgttctcagca
actcaaactcaagaggtggagaacctggtgagagcaggtctccgtaatcctgtccgtatc
tcggtgaaagagaagggagtggcagcgagcaacacacagaaaactccaacacgcctggag
aactattacatgatctgcaaagcagatgaaaaatttaatcagttggtgcattttcttaaa
cagcacaaacaggagaaacatctagtctttttcagcacgtgcgcctgcgtggaatactat
ggcaaggctttggaatccttaattaaacaagtgaagataatgagcatccacgggaaaatg
aaacacaagcgcaacaagatttttaccgagtttcggaagctcccaggtggcattttagct
tgcactgatgtgatggcccgtggcatagacatcccagaagtgcactgggttctgcagtac
gacccacccagcagtgcaagtgcctttgtgcatcggtgcggtcgaacagcacggatcggc
aatgtgggcagcgcgcttgtatttttgcttcccatggaagaatcttacgttaattttctc
tcaatcaaccagaagtgtcccatgcaggaaatgaaaccacagacaaacgtgttggatctt
cttcccaaactgaagtctatggccctggctgacagggcagtgtttgagaaagggatgaaa
gcgtttgtgtcttacgtccaggcttacgccaaacacgaatgtaatctgatcttccgaata
aaagatctggattttgctagcctcgccaaaggttttgcattattaaaaatgccaaagatg
cctgaactaagaggaaaatgttttcctgactttaccccagtcactgttaatacagactcc
atttcctttaaggataaaaatagagaaaaacagagacaaaagcaattagaacaacaaaga
aaagaaagagaggaaaacggagggaaaaagaaattcataaagaacaaagcctggtcaaag
cagaaagccaagagggagaagaaaaagaaaataacagctaaaaggaagcgtgaagagggc
tctgatattgaagatgaggatatggaagagctgctgaatgacacgagactcttgaaaaga
ctaaaaaaggggaaaattagtgaagaagagtttgagaagagactaacaggcagccagaag
agacttaatgtagaaactgttgccgacttagagtctgaaggctga
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