Apaloderma vittatum (bar-tailed trogon): 104267752
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Entry
104267752 CDS
T08559
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104267752 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
avit01009
]
104267752 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
avit04131
]
104267752 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
avit03029
]
104267752 (RB1CC1)
Protein phosphatases and associated proteins [BR:
avit01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104267752 (RB1CC1)
Membrane trafficking [BR:
avit04131
]
Autophagy
Autophagosome formation proteins
ULK complex
104267752 (RB1CC1)
Mitochondrial biogenesis [BR:
avit03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
104267752 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
104267752
NCBI-ProteinID:
XP_009872016
LinkDB
All DBs
Position
Unknown
AA seq
1571 aa
AA seq
DB search
VADLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVCSYSAGTDTNPIFLFNKEMILCERP
PAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQLAVEMYEVAKKLCSFCEGLVHDEH
LQHQGWAAIMANLEDCTYSYQKLLFKFENVYSSYLQSIDDIKLKLTHLGSAVSIMAKIPL
LECLTRHSYRECLGRLDSSAEHGGTESEETEDGKSAELVLYSDISKVNNKSMLASFCKSV
EHSALEGTDPENIKDDKESGQNATVQDNETSVELKDDDQPSFSVSLLDWINVQDRPNDVE
SLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQNMKAIKGLEDRLYALDQMIASCSRL
VNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHANQLMIMLTNHRKLLDIKQKCTTAKQ
ELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTELLERVKVVEALSTVPQMYCLAVVE
VVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESFGKLFRKSFLRNRLFRGLDSWPPSF
CTRKPRRFDSELPDISLNDLQFLQSFCPSEVQPLLRVPILCDFEPLHQHVRALHNLVKAA
QSLDEMSQTITDLLNEQKASNSQASPQSATTPRMESTTGTTIATSSRTPPSLSLQGPLCP
PVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALKQGSLDLDSLAESPESDFMSAVNEF
VIEENPVSPNVISDPQSPEMMVESLYSSVINAIDSRRMQDTNTCVKDISVENAPLNVCME
KCRVIAQDSKVHLRGIKEDLCHFRTLVQREQCDFSNSLKCTSLEIVNTIEKVKLSLEKTL
KDKHQNELESLKSEYETKINKLLEDSEENKKKIKKLKGDLLGLEEVLQNKNDEFAMVKNE
KEAVVCLQNEKDQKLLELECQMETQNSEIKELRQSREVVLEDLKKLHVENNEKLQLLRAE
LESLEQSHLKELENKLQARHLQEIEKALTEHKDCLEKLKKENEHRLEQMQESHSVVVQEK
QQQVEELQLKVSDLSDLRCKLEVELALKEAETDEMKLLLEESRNQQQETLKSHIDKETES
LKKEIDELNNKIQINSEEYQVGLSELRTLMTIEKDQCISELVDRYEEESNLLRTELNKVT
LLHQKTSEAEKRLSEQVTELQSKLELETNALEKEKTEKQSLCEQQEKYQAIIHKLKEEKE
LLVSNQEKDRQLLIQKLNCEKEDAVQTACKEFELQREAAEKGLLEKIQQLEMQVNQSPPV
ESSAESNLIAELQEKLQEEKIKFLEQLEEQEKRKNEEMQNIRTSLTAEQQTNFNTVLARE
KMKKESIINELSEKLKMLTQQQEKDKDLIETLSEDRARLLEEKKKLEEEVNKLRSSNFSP
STYSAAASEVCGACAADIPIDPDKLVSDIAGEGRMDSTMETSMMAVHENVHMSEEKQRIM
LLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVL
FTVSPTLYFLHSESLAALDLKPVSGASRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFY
RVKAVPWNKKV
NT seq
4717 nt
NT seq
+upstream
nt +downstream
nt
tgtggctgatctgaaacatgcgattcaaacgaagtataagattgccattcagcaccaagt
actcgttgtcaatggaggagagtgcatggcaccagatagaagagtatgcagttacagtgc
tggaacagataccaacccaatttttttattcaacaaagaaatgatattgtgtgaacgtcc
accagctatccccaaaaccacattttcagcagagaatgagatggaattgaaagtagaaga
atctctcatgatgcctgcagtgtttcatacggtagcatcacggacacaacttgctgtgga
aatgtatgaggttgccaagaaactttgctccttttgtgaaggtcttgtacatgatgaaca
ccttcagcatcaaggctgggctgccataatggccaacttagaagattgtacatactctta
ccaaaagctgcttttcaagtttgaaaatgtttattccagctatttgcagtccatagatga
tatcaaattgaaacttacacacttgggctctgctgtttctatcatggccaagataccact
gctggagtgcctaacaagacatagttacagagagtgtttaggaagactggattcttcagc
tgagcatggagggacagaaagtgaagaaactgaggatgggaaatctgctgaattggtgct
ttattctgatatatctaaagtgaacaataaatcaatgttagcctcattttgcaagtcagt
tgaacattcggctttggaaggcacagatcctgaaaatataaaagatgataaggaatctgg
tcaaaatgctactgtccaggacaatgaaacatcagtagaactgaaagatgatgatcagcc
ttccttcagtgtgtctttgttagactggataaatgttcaagatagacctaatgatgttga
atcactggtcagaaaatgttttgattctatgagcaggcttgatccaaggatcatccaacc
ctttctggcagaatgtcgccaaactatcgccaaactagataatcagaacatgaaggctat
taaaggccttgaagataggctctatgcattggaccagatgatagcaagctgcagcagact
tgtgaatgaacaaaaagaacttgctcagggatttttggctaatcagaagagagctgagaa
cttgaaagatccttctgtgctgcctgacttatgtttgagtcatgcaaatcagctgatgat
tatgttaactaatcacagaaaactgttagatattaaacagaaatgtaccactgccaaaca
ggagcttgcaaataatctacaagtcaggttgaagtggtgttgttttgtaatgcttcatgc
tgaccaagatggagagaagctacaagcattgcttcgtctcgtaacagagctcctagaaag
ggtcaaggttgtagaggctctcagtactgttcctcaaatgtactgtctagctgttgttga
ggttgtgaggagaaaaatgttcataaaacactacagagagtgggcgggtgctttgataaa
agatgggaaacacctatatgaagctgaaaaggcaaaaagggaatcttttggtaaactgtt
caggaagtcttttctaaggaatcgtttgtttagaggacttgactcctggcctccatcctt
ttgtacacgaaaacctcgcagatttgacagtgagcttccagatatctcgttaaatgactt
gcagtttttgcagtcgttttgtccttcagaagtacagccgttactcagggttcccatact
ttgtgactttgaacctcttcaccagcatgtacgtgctctacataacctggtaaaggcagc
acagagtttggatgaaatgtcacaaaccattacagacctgctgaatgaacaaaaggcctc
caatagtcaagcatcaccacaatctgctaccacgccaaggatggaaagtacaacaggaac
cacaattgctacctcttcaagaactcctccatcactcagtcttcagggtcccctgtgtcc
tcctgtgtgtcccccagctccattagaagaattgtctccagacagcatcgatgctcatac
atttgattttgagactattgcccatccgaacctggagcaagctcttaagcaaggatcatt
agacttggattcattagcagaaagtccagaatctgacttcatgtcagcagtaaatgaatt
tgtaatagaagaaaatccagtatctcctaatgtaataagtgatccacaaagtccagaaat
gatggtggaatctctttattcttcagttatcaatgcaatagacagtagacgtatgcaaga
tacaaatacttgtgtaaaggacatttcagtagaaaatgcacctctcaatgtttgcatgga
gaagtgtagggttattgcccaagactccaaggtacatttaagaggtataaaagaagatct
ttgccactttagaacacttgtacaaagagaacagtgtgacttttctaattctttaaaatg
cacttcattagaaatagtaaatactattgagaaggtaaaactttcacttgaaaaaacact
aaaagataaacatcaaaatgaattagagtctttgaaaagtgaatatgaaactaaaattaa
taaattattggaggatagtgaagaaaataaaaagaagataaaaaagttaaaaggtgacct
attaggccttgaggaagttcttcagaataagaatgatgaatttgcgatggtgaaaaatga
gaaagaagctgtagtttgccttcagaatgagaaagaccagaaattacttgaattggaatg
ccaaatggagacacaaaattctgaaattaaggaactgagacagtcacgtgaggtagtact
tgaagacttgaaaaaacttcatgttgaaaataacgaaaaactgcaactcctgagagcaga
acttgagagtttagagcaaagccatttaaaagaactggaaaataaactacaagccaggca
tttacaggaaattgagaaggcactaactgagcacaaggactgtttagagaagttaaaaaa
agaaaacgagcatagacttgaacaaatgcaggaatctcattcggtagttgtgcaagagaa
acaacaacaagtagaagagttacaactcaaagtttcagatttgtcggatttgaggtgcaa
attagaagttgaacttgccctgaaagaggcagaaactgatgaaatgaagcttcttttgga
agaaagcagaaaccagcagcaagagaccttgaaatctcatattgataaagaaactgaaag
cttaaaaaaggagatagatgaattaaacaataaaatacaaattaacagtgaggaatatca
agtgggcttatcagaattaaggactctgatgacaattgagaaagatcagtgtatttctga
gctagtagacagatacgaagaagaatcaaatttgcttagaactgaactaaataaagtaac
acttcttcatcaaaaaacttctgaggcagaaaaaagactttcagagcaagtaacagaact
acaaagtaagttagagttggaaacgaatgccctagaaaaggaaaaaacagaaaaacagtc
tctttgtgagcagcaggagaagtatcaagctattatccataagcttaaggaagagaaaga
actgttagtatctaaccaagaaaaagacaggcagttgctcattcagaagctcaattgtga
aaaagaggatgcagtgcaaactgcttgtaaagagtttgaattacagagggaagctgctga
aaaagggcttttggaaaaaatacaacaacttgagatgcaagtaaatcagagtcctcccgt
tgaatcatctgctgaatcaaacttgatcgctgaacttcaagagaaacttcaggaagaaaa
aatcaagttcttagagcaacttgaagaacaagagaaaagaaagaatgaagaaatgcagaa
catcagaacatcgctcacagcagaacaacagaccaactttaacactgttctggcaagaga
gaaaatgaaaaaagagagcataattaatgaactcagtgagaaattgaaaatgcttacaca
acagcaagagaaagataaggatttgattgaaacactttctgaagatagagctcgcttact
tgaagagaagaaaaagcttgaagaggaagttaataaactgagaagtagtaatttttctcc
atcaacctactcagcagcagcttcagaagtttgtggagcctgtgcagccgatattcccat
tgacccagacaaattagtttctgacattgcaggtgaagggagaatggactccacgatgga
aactagtatgatggctgtgcatgaaaatgtccatatgtctgaagagaaacagaggataat
gttgttagaaaggactttgcagttgaaagaagaagaaaataagagattaaatcaaagatt
gatgtcccagagcatgtcgtcagtatcctcaagacattctgaaaaaatagcaattagaga
ttttcaggttggcgatttggttcttattatcttggatgaaaggcatgacaactatgtgtt
gtttactgttagtccaaccttgtatttcttgcactcagaatcacttgctgccctggatct
caaaccagtttcaggtgcatctaggagaccttgggtgctgggaaaagtgatggaaaagga
atattgccaagcaaaaaaggcacaaaacagatttaaagttcctttgggtacaaaattcta
cagagtgaaagcagtaccatggaacaagaaagtataa
DBGET
integrated database retrieval system
