KEGG   Apaloderma vittatum (bar-tailed trogon): 104267771
Entry
104267771         CDS       T08559                                 
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
  KO
K10631  E3 ubiquitin-protein ligase Topors [EC:2.3.2.27]
Organism
avit  Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:avit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:avit04121]
    104267771 (TOPORS)
   03036 Chromosome and associated proteins [BR:avit03036]
    104267771 (TOPORS)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:avit03037]
    104267771 (TOPORS)
Enzymes [BR:avit01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104267771 (TOPORS)
Ubiquitin system [BR:avit04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104267771 (TOPORS)
  UBL E3 ligases
   104267771 (TOPORS)
Chromosome and associated proteins [BR:avit03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    104267771 (TOPORS)
Cilium and associated proteins [BR:avit03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   104267771 (TOPORS)
SSDB
Motif
Pfam: zf-C3HC4 zf-RING_2 zf-C3HC4_2 zf-C3HC4_3 zf-RING_UBOX zf-rbx1 zf-RING_5 zf-C3HC4_4 zf-ANAPC11 RING_XB3-XBAT31 Rad50_zn_hook zf-RING_4
Other DBs
NCBI-GeneID: 104267771
NCBI-ProteinID: XP_009875795
LinkDB
Position
Unknown
AA seq 520 aa
MTSTVKDFPEDSNLSPKASTSKLPTDASPDSKCPICLDKFDNVAYLDRCLHRFCFRCVQE
WSKNKAECPLCKQPFFSIFHTIRAEDDFKEYVLSPTEESSFASPNGQRFRYRTTLTGERR
AGSSPSRRMLSPLPSRRIMSPPDNGILFEGLSSEPVRQRDGEIQQMIRRLASRRQASAEG
RSLRQIQEEDMINFRRALYRTGVRIRSIQDGGRYRDISAEFFRRNPACLHRLVPWLKREL
TVLFGAHGSLINFVQHIIMSNVTRYDLESQDFADDLKPFLLNRTEHFLHEFISFARCPFN
LEAYDQHANYDCPAPSYDEGSRSDSSIITISPDTAYSQGPDNSLSMTGLSQAPWDDETPG
PSYFFSDSVPAGIDTPLEASESSDEDSATKSQRTKLQTELQANAPSNKSDSSSDSCIIVG
YVKPLAERTPEVVELSSDSEESIREEKKEDAKNQQPVQSRSWSDTEPSRSFSPRSPTHKE
DVGSYRNCLSPAVEKMEPKDSEKNKCKVKDLSPQDLSWSP
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgacttcaactgttaaggactttccagaagacagcaacctttcgccaaaagccagcact
agcaaactgccaacagatgcatctcctgactctaaatgccccatctgcttggacaaattt
gacaatgttgcctatcttgatcgctgcttgcataggttttgtttccgctgtgtccaggag
tggtcaaaaaacaaagcagaatgccctctctgcaagcaaccctttttttccatttttcat
acaattcgcgctgaagatgactttaaggagtatgtactcagccctacagaagagagctct
tttgccagccctaatggccagagatttcgttaccgtaccaccttaacaggggaacgccgt
gctggcagttccccttcccgaaggatgctgtctcctctgccttcccgaaggataatgtct
cctccagataacgggatattgtttgaagggctgtcaagtgaaccggtgcggcagagggac
ggagagattcagcagatgataaggaggctggcctccaggaggcaggccagtgcagagggc
agatctctgcggcagattcaggaggaagacatgatcaacttccgcagagctttgtaccgt
actggtgtgcgtattcgtagtattcaggatggtggccgttaccgagacatttctgcagag
tttttccgccgcaaccctgcttgccttcaccggctggttccttggctgaagcgagaactt
acagtcctgttcggtgctcatggatctttgataaattttgtgcagcacattatcatgagt
aatgtgactaggtatgatctggaaagtcaggacttcgctgacgatttaaagccatttttg
ctgaatcggactgaacacttcttacatgaattcatcagttttgcccgttgtccttttaac
ttagaagcatatgatcagcatgccaattatgactgtcctgcaccatcatacgatgaagga
agccgctcagactcgtcaattattaccatatctccagatacggcatattctcaagggcca
gataacagtttgtctatgactggtcttagtcaggccccctgggatgatgaaactccaggg
ccttcctatttcttttcagattcggttcctgcaggcatagatactcctctggaggcatca
gaaagctctgatgaggactctgctacaaagagtcaaagaaccaagctgcaaactgagtta
caggctaatgctccctcaaacaagagtgactcttcctcggacagttgcattattgttggg
tatgttaagccgttagctgagaggacgccagaagtggttgagctgtcctcagactctgag
gagtccatcagggaagagaaaaaggaagatgcgaaaaatcagcagccagtacagtctcgc
agctggagtgatactgaaccaagcaggagtttctcgccacgttctcccacacataaggag
gatgtaggtagttatagaaactgcttatctcccgcagttgagaagatggagccaaaagac
agtgagaagaacaaatgtaaagtaaaagacctgtctccacaggacttgagctggagtccc

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