KEGG   Apaloderma vittatum (bar-tailed trogon): 104267776
Entry
104267776         CDS       T08559                                 
Name
(RefSeq) putative RNA exonuclease NEF-sp
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
avit  Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:avit00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    104267776
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:avit03009]
    104267776
Ribosome biogenesis [BR:avit03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    104267776
SSDB
Motif
Pfam: RRM_1 RNase_T
Other DBs
NCBI-GeneID: 104267776
NCBI-ProteinID: XP_009868549
LinkDB
Position
Unknown
AA seq 674 aa
MSQLHFYKFYLQFKHLRKVFRHRFTLTPSATFPDSLYGDGANRKSQTTAQGLTSTSSECV
PKSSDLQCDPIIRKYGEKKGGLTSYTLTLEEQKKNYYPIKGSPGCKGYIDTECDQQRTDS
SPLFGLDCEMCLTAKGNEVTRVSLVDAQGQCLLNELVKPESTVVNYRTRFSGITKKMLLP
VKTRLSDIQTRLKKMLPHDAVLVGHSLNADLQALEMIHPSVIDTSLLFARNEGRRFKLKF
LAKAVLGKEIQCEQKLGHDPAEDARAALELAQFFIEQGPAKVAELNLEMLLTTEKLAEVS
QNKAVLKPQGCRAQKKLSEPPHLSRPCFLDCLQVTGLKPLLLGRQELDSSGLCQSNLSAS
NKQVLHRALEDVPLSTFSIIQFTLGPDYIGAHCLAGLCEKVRSKLTDMLTIYAGPFEENF
CLKSVKKEFGRCGPIQSLTVVTETYQPYVCIQYEVLEAAQLAVESLNGAEIAGSCIKVQR
PVTAATLDCEVLIKELELDVENEGVIYVAGLKKTLTEMDLEEEFRQLKDLETLFLPTDLQ
NGKHRNCCFLKFQKSESAADALGVINGWTMKGSKLRSRNALASGHLWRWIQQMNHSNGKQ
GGNILHEKTEQQSDLEQELKKKVKKLDHHIKKLYRSLQNNTLCVVLFPGVNSVHGSQSGL
GLMEIKDDGGRSAC
NT seq 2025 nt   +upstreamnt  +downstreamnt
atgagccaactccatttctacaaattctatttgcagttcaaacacctcagaaaagtgttc
cggcataggttcacattaacaccgtccgctaccttcccagacagcctgtacggagacggg
gcaaaccggaaatctcaaaccactgcacaaggtttgacttccactagcagtgaatgtgtt
cctaaaagctcagacttgcaatgtgatcccatcattcggaaatacggagaaaaaaaaggt
ggccttactagctatactttgactttagaagagcagaaaaaaaactactatcccataaaa
ggctcccctggatgtaagggctatatagatacggagtgtgatcagcagaggacggacagc
agccccctcttcggtctggattgtgaaatgtgcctgacagcgaaagggaatgaagtcact
cgtgtctctttggtggatgctcagggtcaatgcctcttgaatgaactagtcaaacccgaa
agcacagtagtgaactaccgcaccagattctcaggaatcacaaagaaaatgcttcttcca
gtgaaaacacgactgtcggacatccaaactagattaaaaaagatgcttccccatgatgca
gtattggtgggtcattctctaaatgccgatcttcaggctttggaaatgatccaccccagc
gttattgatacttcattgctttttgccagaaatgaaggtcgaagatttaagctaaaattc
ctagccaaagctgttttagggaaggagattcagtgtgagcagaagcttgggcatgatcct
gcagaagatgctagagctgcattggaattggctcagttctttattgagcaaggaccagca
aaggtagcagaactaaacttggagatgcttttgacaactgaaaaactggctgaggtctcg
cagaacaaagccgtgctaaagccacaaggatgcagggcccagaaaaagttgagtgagcct
ccacatttatccaggccatgttttttagactgcttgcaggtgactggcctaaagcccctc
cttctgggcaggcaggaactagactcttctggcctgtgtcagagtaacctgagcgcctca
aacaaacaggttcttcatagagcgttagaagacgttcccctgtccacattcagtatcatt
cagttcactttgggtccagactacattggagctcactgtcttgctggactttgtgaaaag
gtgagaagcaagctgactgacatgctgacaatttatgcaggtccttttgaagaaaacttt
tgcctgaagtctgtgaaaaaagaatttgggaggtgtggaccaatccagtctcttacagtg
gtaactgaaacgtaccagccctatgtctgtatccaatatgaagtgctggaagctgcccag
ctcgcggtcgagagcctaaatggagctgagatagcaggatcctgcattaaggtccagaga
cccgtcactgcagcaacgctggactgtgaggttttgataaaggaactagaactagatgta
gagaacgaaggtgtgatctacgtggcgggtctaaagaagacattaaccgagatggacttg
gaagaagaattcaggcagctgaaagacctggaaacactgttcctgccaacagatctccag
aatggaaagcacaggaactgctgtttcctcaaattccagaaatcagagagtgctgcggat
gcccttggagttataaatggatggaccatgaagggcagcaaactaagaagtagaaacgct
cttgcttcaggtcacctctggagatggattcagcaaatgaatcacagcaacgggaagcaa
ggaggaaatatcttgcatgagaaaacggagcagcagtctgacttggagcaggagctaaag
aaaaaggtgaagaagttagaccaccatatcaaaaagctttacagaagtctgcagaataac
actctgtgcgtcgttctctttcctggagtgaacagcgtgcatggatcacaatctggcctt
ggtctgatggaaataaaagatgacggagggaggagtgcttgttaa

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