Apaloderma vittatum (bar-tailed trogon): 104267776
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Entry
104267776 CDS
T08559
Name
(RefSeq) putative RNA exonuclease NEF-sp
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104267776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
avit03009
]
104267776
Ribosome biogenesis [BR:
avit03009
]
Eukaryotic type
Pre-60S particles
RNases
104267776
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RNase_T
Motif
Other DBs
NCBI-GeneID:
104267776
NCBI-ProteinID:
XP_009868549
LinkDB
All DBs
Position
Unknown
AA seq
674 aa
AA seq
DB search
MSQLHFYKFYLQFKHLRKVFRHRFTLTPSATFPDSLYGDGANRKSQTTAQGLTSTSSECV
PKSSDLQCDPIIRKYGEKKGGLTSYTLTLEEQKKNYYPIKGSPGCKGYIDTECDQQRTDS
SPLFGLDCEMCLTAKGNEVTRVSLVDAQGQCLLNELVKPESTVVNYRTRFSGITKKMLLP
VKTRLSDIQTRLKKMLPHDAVLVGHSLNADLQALEMIHPSVIDTSLLFARNEGRRFKLKF
LAKAVLGKEIQCEQKLGHDPAEDARAALELAQFFIEQGPAKVAELNLEMLLTTEKLAEVS
QNKAVLKPQGCRAQKKLSEPPHLSRPCFLDCLQVTGLKPLLLGRQELDSSGLCQSNLSAS
NKQVLHRALEDVPLSTFSIIQFTLGPDYIGAHCLAGLCEKVRSKLTDMLTIYAGPFEENF
CLKSVKKEFGRCGPIQSLTVVTETYQPYVCIQYEVLEAAQLAVESLNGAEIAGSCIKVQR
PVTAATLDCEVLIKELELDVENEGVIYVAGLKKTLTEMDLEEEFRQLKDLETLFLPTDLQ
NGKHRNCCFLKFQKSESAADALGVINGWTMKGSKLRSRNALASGHLWRWIQQMNHSNGKQ
GGNILHEKTEQQSDLEQELKKKVKKLDHHIKKLYRSLQNNTLCVVLFPGVNSVHGSQSGL
GLMEIKDDGGRSAC
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgagccaactccatttctacaaattctatttgcagttcaaacacctcagaaaagtgttc
cggcataggttcacattaacaccgtccgctaccttcccagacagcctgtacggagacggg
gcaaaccggaaatctcaaaccactgcacaaggtttgacttccactagcagtgaatgtgtt
cctaaaagctcagacttgcaatgtgatcccatcattcggaaatacggagaaaaaaaaggt
ggccttactagctatactttgactttagaagagcagaaaaaaaactactatcccataaaa
ggctcccctggatgtaagggctatatagatacggagtgtgatcagcagaggacggacagc
agccccctcttcggtctggattgtgaaatgtgcctgacagcgaaagggaatgaagtcact
cgtgtctctttggtggatgctcagggtcaatgcctcttgaatgaactagtcaaacccgaa
agcacagtagtgaactaccgcaccagattctcaggaatcacaaagaaaatgcttcttcca
gtgaaaacacgactgtcggacatccaaactagattaaaaaagatgcttccccatgatgca
gtattggtgggtcattctctaaatgccgatcttcaggctttggaaatgatccaccccagc
gttattgatacttcattgctttttgccagaaatgaaggtcgaagatttaagctaaaattc
ctagccaaagctgttttagggaaggagattcagtgtgagcagaagcttgggcatgatcct
gcagaagatgctagagctgcattggaattggctcagttctttattgagcaaggaccagca
aaggtagcagaactaaacttggagatgcttttgacaactgaaaaactggctgaggtctcg
cagaacaaagccgtgctaaagccacaaggatgcagggcccagaaaaagttgagtgagcct
ccacatttatccaggccatgttttttagactgcttgcaggtgactggcctaaagcccctc
cttctgggcaggcaggaactagactcttctggcctgtgtcagagtaacctgagcgcctca
aacaaacaggttcttcatagagcgttagaagacgttcccctgtccacattcagtatcatt
cagttcactttgggtccagactacattggagctcactgtcttgctggactttgtgaaaag
gtgagaagcaagctgactgacatgctgacaatttatgcaggtccttttgaagaaaacttt
tgcctgaagtctgtgaaaaaagaatttgggaggtgtggaccaatccagtctcttacagtg
gtaactgaaacgtaccagccctatgtctgtatccaatatgaagtgctggaagctgcccag
ctcgcggtcgagagcctaaatggagctgagatagcaggatcctgcattaaggtccagaga
cccgtcactgcagcaacgctggactgtgaggttttgataaaggaactagaactagatgta
gagaacgaaggtgtgatctacgtggcgggtctaaagaagacattaaccgagatggacttg
gaagaagaattcaggcagctgaaagacctggaaacactgttcctgccaacagatctccag
aatggaaagcacaggaactgctgtttcctcaaattccagaaatcagagagtgctgcggat
gcccttggagttataaatggatggaccatgaagggcagcaaactaagaagtagaaacgct
cttgcttcaggtcacctctggagatggattcagcaaatgaatcacagcaacgggaagcaa
ggaggaaatatcttgcatgagaaaacggagcagcagtctgacttggagcaggagctaaag
aaaaaggtgaagaagttagaccaccatatcaaaaagctttacagaagtctgcagaataac
actctgtgcgtcgttctctttcctggagtgaacagcgtgcatggatcacaatctggcctt
ggtctgatggaaataaaagatgacggagggaggagtgcttgttaa
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