Apaloderma vittatum (bar-tailed trogon): 104267778
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Entry
104267778 CDS
T08559
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104267778 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
avit03041
]
104267778 (DDX5)
03009 Ribosome biogenesis [BR:
avit03009
]
104267778 (DDX5)
Enzymes [BR:
avit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104267778 (DDX5)
Spliceosome [BR:
avit03041
]
Complex A
U1 snRNP components
U1 related factors
104267778 (DDX5)
Complex B
104267778 (DDX5)
Ribosome biogenesis [BR:
avit03009
]
Eukaryotic type
Pre-60S particles
Helicases
104267778 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
104267778
NCBI-ProteinID:
XP_009872276
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
FGVPRFGGSRGGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPDVVRRTVQEVEQ
YRSSKEITVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMV
GVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYSRACR
LKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLD
MGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQ
IVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDK
SQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARS
TKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGSGRSRGDRRDRYSAGK
RGGFSSFRERENFERNYGALGKRDFGAKTQNGAYSAQSFSNGTPFGNGFAAAGMQAGFRA
GNPAGAYQNGYEQQYGSNIANMHNGMNQQQYAYPATGAAPMIGYPMPTSYSQ
NT seq
1780 nt
NT seq
+upstream
nt +downstream
nt
gtttggagttccccgttttggaggaagcagaggtggacctctgtctgggaagaaatttgg
aaaccctggggaaaaacttacaaaaaagaaatggaatttagatgagctgcccaaatttga
gaagaacttctaccaagaacatcctgatgtagtcagacgtactgtgcaagaagttgaaca
gtacagatcaagcaaagaaatcacagttaggggccataactgtccaaaacccattataaa
cttctatgaagctaactttcctgcaaatgttatggaagtaattcagagacagaacttcac
tgaaccaactgctattcaagcgcagggttggcctgttgcattgagtggattggatatggt
tggagtggcacaaactggatcagggaaaacactgtcttacttgttgcccgctattgtgca
tataaatcatcagccattcctggagcgaggagatggacctatttgtcttgtgctggcacc
gactcgtgaactggctcagcaagtgcagcaggtagctgccgaatatagcagagcgtgccg
tttgaagtctacatgtatttatggaggtgctccaaaggggccacaaattcgtgacttgga
gagaggtgtggaaatctgcattgcaacacctggaagacttatagacttcttggaagcagg
aaagaccaatctcaggaggtgtacttaccttgtccttgatgaagctgacaggatgcttga
catgggatttgaacctcagatcagaaaaattgtggatcagataagacctgacaggcaaac
tctgatgtggagtgccacctggccaaaggaagtaaggcagctggctgaagactttttgaa
agaatacgtacacataaacattggtgctttagagctaagtgcaaaccacaacattcttca
aattgtggatgtgtgtcatgatgtagagaaagatgacaagcttattcgtttgatggaaga
aataatgagtgagaaggagaataaaacaattgtttttgtggaaaccaaaagacggtgcga
tgatcttaccaggaaaatgaggagggatgggtggccagcaatgggtatccatggtgataa
aagtcagcaggagagggactgggttttaaatgaattcaaacacggaaaagcaccaatcct
gattgctacagatgttgcatccagaggtctagatgtggaagatgtgaaatttgtcatcaa
ttatgactaccctaactcctcagaggactatatccaccgaattggacgaactgcccgcag
taccaaaacaggcacagcatacacattctttactcctaacaatattaagcaagtaaatga
cctcatctctgtgcttcgtgaggctaatcaagccatcaaccccaaattgcttcagttgat
tgaagacagaggttcaggtcgttcccgaggtgatcgccgtgaccgatattctgcgggcaa
aaggggtggatttagtagttttagagagagggagaactttgagagaaactatggtgcgct
aggaaagagagacttcggagcgaaaactcagaacggggcctacagtgcccagagtttcag
taatggaactccttttgggaatggctttgcagctgcaggcatgcaggctggcttcagggc
tggtaaccctgcgggagcttaccagaacggctacgagcagcagtacggcagtaacatcgc
caatatgcacaatggcatgaaccagcagcagtacgcgtaccctgccactggtgctgctcc
tatgataggttacccaatgccgacaagttactctcaataa
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