KEGG   Apaloderma vittatum (bar-tailed trogon): 104268002
Entry
104268002         CDS       T08559                                 
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
  KO
K15542  polyadenylation factor subunit 2
Organism
avit  Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:avit00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    104268002 (WDR33)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:avit03019]
    104268002 (WDR33)
Messenger RNA biogenesis [BR:avit03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     104268002 (WDR33)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 EIF3I Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_IFT122_1st eIF2A WD40_RFWD3 Collagen Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR11_2nd Beta-prop_WDR41 Ge1_WD40 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 104268002
NCBI-ProteinID: XP_009873053
LinkDB
Position
Unknown
AA seq 1324 aa
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYAPGDDLEPNSLAVIPGMGIPEQLKIAMEQEQMGKDESNDIEMTIPGLDWG
MEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPLPPPPEPLNDRKEDIKLEEKKKT
QAEIEQEMAALQYTNPQLLEQLKIERLAQKQAEQVQPPPPGGSLHGPQPFPGQGPMSQMP
QGFQQPLPPQQMPMNMPQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGAAGPQGFMGPQGP
PGPQGPPQGMPRPQDLHGHQGMQRHPGPHGPMGPPGPQGNTGPQGHLGPQGLPGSQTHLG
PQGPPGPQGHLGPQGPPGSQGMQGPPGPRGMQGPLPHGMQGAPGSQGMQGPISQGPLMGL
NPRGMQGPPGPRENQGPTPQGMMMGHPQEMRGPHMQSGLLGHGPQEMRGLQGPPPQGTML
GPPQELRGPPGPQGQQGPPQGSLVGPQGNMQGPQGQPNPSRGPHPSQGPLPFQQQKTPLL
GDGPRPPFNQDGQNPGPPPLIPGLGQQGGQGRLGPHNQGPGLNKGDSRGPPNHHMGPLSD
RRHDQNSGGPDHGPDRGLFRGGQEWGDGRDSRGMPDRRGPHPDFHDDFDRPDDFRDDFHP
DKRFGHRLREFEGRGGPPLQDEKWRRGGPGPPFPPDHREFEGGGSNRGPPGAWEGRRPSD
DRYPRDPEDARFRGRRDESFRRGGPSRHEGRGPRGRDGFPGPEDFGPDDTFDSPDDNSRG
RDHGVRGRGRGALRGGRKGLLPTPDELPRFEGGRKPESWDGNREPGPRSDHPPHDGHSPA
NRERSSSLQGMDMASLPPRKRPWHDGPGTSDHRDMDAPGGPPEERSKGRGNSGPSQRAPK
SGRSSSLDGDHHDAFHRDEAFGGGPAGGNNPSRGGRSGSNWGRGNNMNSGQSRRGASRGG
GRGR
NT seq 3975 nt   +upstreamnt  +downstreamnt
atggccacagaaattggctccccaccccgatttttccatatgccgaggttccagcaccag
gcgcctcggcagttgttctacaaaagacctgattttgcacagcagcaagcaatgcaacag
ctgacttttgatgggaaacgcatgagaaaagctgtgaaccgaaagaccatagactacaat
ccctctgtaattaaatatttggagaatagagtatggcagagagaccagcgagatatgcga
gcaatccagcccgatgcaggatattataatgacttggtccctcctataggaatgctgaac
aaccctatgaatgctgtaacaacaaagtttgttcggacatctactaataaagtaaaatgc
ccagtatttgttgtcaggtggactcctgaggggagacgcttggtcactggtgcatctagt
ggagagttcacattatggaatggactgactttcaattttgaaacaatattgcaggctcac
gacagccctgtaagggctatgacttggtcacacaatgatatgtggatgctgacagcagac
cacgggggatatgtgaaatactggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgacgacggcactgttagaatctgggactttctacgttgccatgaggagagaattctt
cgaggacatggagcagatgtgaaatgtgttgactggcatccaacaaaaggattagttgta
tcaggaagcaaagatagccaacagcccatcaagttctgggatccaaaaactggtcagagc
ctggccacgctacatgctcataaaaacacagtgatggaggtgaaactgaatctgaatggc
aactggctgctaacagcttctcgtgaccacctctgtaagctctttgacattcgtaacctg
aaagaagaacttcaggtcttcaggggtcataagaaggaggccacagctgtggcctggcat
cctgttcacgaagggttgtttgccagtggaggatctgatggctctctgctgttctggcat
gtcggggttgagaaggaggttggtggaatggaaatggcccatgaaggaatgatctggagt
ctggcatggcatccccttggacacattctttgttcaggatcaaatgatcacaccagcaag
ttttggactagaaatcggcctggagataaaatgcgagatcgttacaacttgaatctattg
cctgggatgtcagaagacggtgtggaatatgctccaggagatgatctggaacccaacagc
ctagcagttattcctgggatgggaatacctgaacaattaaaaatagccatggagcaagag
cagatggggaaagatgagtccaatgacattgaaatgacaatcccaggactggactgggga
atggaggaagtaatgcaaaaggaccaaaagaaggtgccacagaaaaaagtcccctatgca
aaaccaataccagcacagtttcagcaggcatggatgcagaataaagttcctttgcctccc
ccacctgagccattgaatgacagaaaggaagatattaagctggaggagaaaaagaagaca
caagcggagatcgaacaggaaatggcagcacttcagtacacaaacccacaactcctggag
caactgaagattgagcgacttgcacaaaagcaagctgagcaagtgcagccgccacctcca
ggaggctcgcttcatggaccccagccttttccagggcaaggcccaatgtcacagatgcct
caaggatttcagcagccccttccacctcagcagatgccaatgaatatgcctcagatggga
cctcccggtccacaaggacagttcagacctccgggaccccaaggacaaatgggacctcag
ggtcctccgttacaccaaggagctgcaggtccacaagggttcatgggaccacaagggcct
ccaggcccccaggggcctccacaaggaatgccacggcctcaggatttacatggacatcaa
ggaatgcagagacatcctggtcctcacgggccgatggggcctccaggcccacagggtaac
actggccctcaaggccacctgggaccacagggtctacctgggtctcagactcatttagga
ccgcagggtccacctggcccacaaggtcacttgggtcctcaaggtccccctggtagtcaa
ggaatgcaagggccacctggtccccgaggaatgcaaggacctcttcctcatggcatgcaa
ggagctccaggatctcaagggatgcagggccctatatctcaagggccgttgatgggactt
aatccaagaggaatgcagggtccaccaggacctagagaaaaccagggacctactccacaa
gggatgatgatgggtcatccacaagaaatgagaggtccccatatgcaaagtggtttacta
ggacatggtccacaggagatgaggggcctccagggacccccgcctcaaggtacaatgtta
ggaccgccacaagaattgcgtgggccgccaggtccacaaggccagcagggacctccacaa
ggctctttagtagggcctcaaggaaacatgcaaggacctcagggacaaccgaacccttca
cgggggccacatccttcccagggccctctgcctttccagcagcagaaaacgcctctgttg
ggtgatgggcctcggcccccatttaatcaggacggacagaacccaggtcccccgccactg
ataccaggactggggcagcagggaggacaaggtcgtcttggccctcataaccaaggacct
ggtcttaataaaggtgactcccgtggtccaccaaaccatcacatgggccctctctcagat
agaaggcacgaccagaacagtggtggtcctgatcatgggcctgacagagggttgtttcga
ggtggccaggagtggggtgatggtagagacagcaggggcatgccagatagacgaggacct
cacccagatttccatgatgactttgatcgaccagatgacttccgtgacgacttccatcca
gacaagagatttggccatcgattacgggaatttgaggggagaggaggcccaccgttgcaa
gacgaaaaatggagacgaggtggacctgggcctccctttcctcctgatcacagggaattt
gaaggagggggttcaaaccgtgggcctcctggtgcttgggaaggacggcgaccttcagat
gatagatatccacgggatcctgaggatgcacggttccgaggaagacgagatgagagcttc
agaagaggaggaccctcgagacatgagggccggggacccagggggagagatggttttcct
ggccctgaagattttgggccagatgacacttttgactctccagatgataactcaagagga
agggaccatggtgttcgggggcgaggtcgtggtgctcttagaggaggccgcaagggttta
cttcctactcccgatgaactcccacgctttgaaggagggcggaaaccagaatcctgggat
ggaaacagagaaccaggtcctcgttcagatcaccctcctcatgacgggcattctccagct
aacagagaacgttcttcttcgctccagggcatggacatggcctcattgccaccacgtaaa
cgtccctggcatgatggaccagggacctctgaccatagagatatggatgctccaggtgga
cctccagaggagaggagcaaaggacgaggaaattcaggaccttcacaaagagctccaaag
tctgggaggtctagttctttagatggagaccatcacgacgcattccacagggatgaagct
ttcggtggaggccctgcaggaggcaataacccttcccgaggaggaaggagtggaagtaat
tggggaagaggaaataacatgaactctggtcaatcgagaagaggagcatctaggggtggt
ggaagaggccgatag

DBGET integrated database retrieval system