Apaloderma vittatum (bar-tailed trogon): 104268005
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Entry
104268005 CDS
T08559
Symbol
DDX17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
avit03041
]
104268005 (DDX17)
Enzymes [BR:
avit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104268005 (DDX17)
Spliceosome [BR:
avit03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104268005 (DDX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104268005
NCBI-ProteinID:
XP_009863069
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
FGASRGGPLPPKKFGNPGERLRKKKWDLNELPKFEKNFYVEHPEVARLTPYEVEELRRKK
EITIRGMEGCPKPVFAFHQCSFPQYVMDALMDQNFTEPTPIQCQGFPLALSGRDMVGIAQ
TGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKST
CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFE
PQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINVGNLELSANHNILQIVDV
CMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPE
RDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKG
TAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGGGGGGGRSRYRTSSSVNN
PNLMYQEECDRRLRGVKEGRRDSGGFRDRERGDSYANGANKTYGSAYGSPNSAFGAAQSQ
YGYAQGSYGA
NT seq
1651 nt
NT seq
+upstream
nt +downstream
nt
gtttggagcaagtcgtggaggtcctcttcctccaaagaaatttggtaatccaggggaacg
tttacgtaagaaaaaatgggatttaaatgaactgcccaagtttgagaagaatttttatgt
ggaacatccggaagtggccagacttactccgtacgaagttgaagagttgcgaagaaagaa
agagataacaattcgaggaatggagggctgccctaagcctgtgtttgccttccaccagtg
tagctttccgcagtatgtgatggatgccttgatggaccagaacttcacagaacccactcc
aattcagtgccaaggctttccgctagccctcagtggtcgtgatatggtgggcattgcgca
gactggctctgggaagacactagcgtacttgttgcctgcgattgttcacatcaaccacca
gccgtacttggagagaggggatggcccaatttgtctggttctagcacctacgagagagtt
ggcccagcaggtgcagcaggtggctgatgattatggcaaatgttcaagactgaagagtac
ctgcatatatggaggagcacccaaaggtccacaaatcagagatctagaaagaggtgtgga
gatctgcattgctacaccaggtcgcttgattgacttccttgaggcaggaaagaccaacct
tcgtcggtgtacgtacctggtgctcgatgaagcagacaggatgttggacatgggatttga
accccaaatccgtaaaattgttgaccagataaggcctgacagacagactctgatgtggag
tgccacatggccaaaagaagtgcgccagcttgccgaggacttcctgcaggactatgttca
gatcaacgtgggaaacctggagctgagtgccaaccacaatatcctgcagatagtggatgt
gtgcatggagagtgagaaagaccataaactgatacaactgatggaagaaatcatggcaga
gaaggaaaacaagactatcatctttgtggagacaaagaggcgatgtgatgatctcactcg
aaggatgcgcagagatggttggccagctatgtgtatccatggagacaagagtcagccaga
aagagattgggtgcttaatgagtttcgttctggaaaggctcctatcctcattgctaccga
cgttgcatctcgtgggctagacgtggaagacgttaaatttgtgataaactacgactatcc
gaacagctctgaagattacgtgcaccgcattggccgtactgcgcgtagtaccaacaaagg
tactgcctacaccttctttacaccaggaaacctgaaacaagccagggagcttatcaaagt
gctggaagaggccaatcaagccatcaatccaaagctgatgcagcttgtggaccacagagg
aggaggaggtggtggtggaggaggtcgctctcgttaccgaacgagcagttcagtaaacaa
ccctaacctgatgtaccaggaagagtgtgacaggaggctccggggagtgaaagagggccg
gagagactcaggtggcttcagagaccgtgagcgtggtgacagttatgccaacggagccaa
caagacctatggcagtgcctacgggagcccaaattccgctttcggggcggcacagagcca
gtatggttacgctcaggggagctatggagca
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