Apaloderma vittatum (bar-tailed trogon): 104268014
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Entry
104268014 CDS
T08559
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03420
Nucleotide excision repair
avit03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104268014 (ERCC4)
03460 Fanconi anemia pathway
104268014 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avit03032
]
104268014 (ERCC4)
03400 DNA repair and recombination proteins [BR:
avit03400
]
104268014 (ERCC4)
DNA replication proteins [BR:
avit03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
104268014 (ERCC4)
DNA repair and recombination proteins [BR:
avit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
104268014 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
HHH_5
RVT_1
DUF4110
Motif
Other DBs
NCBI-GeneID:
104268014
NCBI-ProteinID:
XP_009866309
LinkDB
All DBs
Position
Unknown
AA seq
906 aa
AA seq
DB search
SGLDEHRICWMKHRLDGWAPWVVVGGVKCSWWPVTSGVVQGSVLGPLLFKVFIDELDKDI
ECIEYFIDQLRSDGVVHLPRRVTNEIANNTRYEFYTQGGVIFATSRILVVDFLTDRIPAN
LITGILVYKAHRIIESCQEAFILRLYRQKNKQGFIKAFTDNAVAFNTGFCHVEIVMRNLF
VRKLYLWPRFHIAVNSFLEKHKPEVVEIHVSMTPAMRAIQTSVLDILNACLRELKRYNPA
LEVEDLSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLLYLTQYDCVTF
LNLLESLKASEKAFGENSGWLFLDSSTSMFVNARARVYRIADEKLNQKGKVSEKVKKENE
LKRELVLESNPKWEALREVLKEIENENKNSEDLGGPGQVLICASDDRACAQLREYIIAGA
EAFLTRLYNKSFGKDEKAGEVWINDRKPVKSKGNARPDTGPQTKKPKFTASSKHNKHKKQ
QDRTIIQMIGKTEEGKREELEVEDNKELNSSQDSSIEETIPEDFDVNLPSDCYYGIFKNP
LTIIHPLQGCNDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYKASRPGKPLRVYFLIY
GGSTEEQRYLTALRKEKEAFEKLIREKASMVIPEEREGRDETNLDLVRDATPASFSADTR
KAGGQEQKSVQQTIIVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTPDTCVERKSIS
DLIGSLNNGRLYAQCISMSRYYKRPILLIEFDPNKSFSLIPRGSLHQEISSNDVTSKLTL
LTLHFPKLRILWCPSPHATAELFEELKQNHPQPDAETAMAVTADSEILPESDKYNPGPQD
FLLKMPGVNAKNCRALMNHVKSIAELVTLSKDELSKILGNAANATQLFDFIHLTYGEAIS
KGKSKR
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
agtggcttggatgagcacaggatctgctggatgaagcaccggctggatggatgggcccca
tgggtggtggtcggtggagttaaatgcagctggtggccggtcacaagtggtgttgttcag
ggctcggtgttgggaccgcttctgtttaaagtctttattgatgagcttgataaggacata
gagtgtatcgagtattttatcgatcagctgaggtcagatggagttgttcatcttcctcgg
cgtgttaccaatgaaattgcgaataacactcgttatgaattttacacacaaggaggagtc
atctttgcaacaagtcgaatccttgtggtagattttcttactgacagaattcctgcaaac
ctcattactggcattttggtatacaaagcacacagaatcattgaatcttgtcaggaagca
tttatcttgagactttatcgccagaagaacaagcaaggctttattaaagcttttacagat
aatgcagttgcttttaatactggtttttgccacgtggaaatagtgatgagaaatcttttt
gtcaggaagctttatctgtggccaagatttcatatagcggtgaactcatttttagagaag
cataaacctgaagtggtggaaatacatgtgtcaatgacccctgccatgcgtgctatccag
acttcagtcctggacattttgaatgcgtgtctgagagaactcaaacgttataatccagct
cttgaagtagaagatctatctttagaaaatgctattggtaaaccttttgacaagacaata
cgtcactatttagatcctctctggcatcagcttggagctaagactaaatctttggtccag
gatttgaagatactacgtactttgctcctgtatctaactcagtatgattgtgtcactttc
cttaatcttctggagtcactgaaagcaagtgaaaaagcttttggtgagaattcaggttgg
ctgtttcttgactccagtacttcaatgtttgtaaatgctcgagctagagtttatcgcatt
gcagatgagaaactgaatcagaaaggcaaagtctctgaaaaagtaaagaaggaaaatgag
ctgaaaagggagttggttctagaaagtaatcccaaatgggaagctttgagagaagtattg
aaagagattgaaaatgagaataagaacagtgaagaccttggtggtccagggcaagtgctg
atttgtgccagcgatgaccgagcttgtgcacagctcagggagtacattattgctggagca
gaagcttttttaacaagactgtataacaaaagctttggaaaggatgagaaagctggagaa
gtgtggattaatgacagaaaaccagtcaagtccaaaggaaatgccagaccagacacaggg
cctcaaaccaaaaaacccaaattcacggcttcttcaaaacataataaacacaagaagcag
caagaccggactataatccaaatgataggaaaaactgaagagggcaagagagaggagcta
gaggtggaagataacaaggaattaaacagtagccaagacagcagtattgaagagaccatt
cctgaagatttcgacgtgaacttaccctcagattgttactacggtattttcaagaacccg
ctcacaattattcatccattgcaggggtgcaatgatccctatgcgctcactcgggtactg
catgaagtagaaccaagatacgttgtattatatgatgcagaattaacttttgttcgacag
ctggaaatctacaaggcaagcaggcctgggaagcctttgagggtttattttctcatctat
ggaggctcaacagaagaacagcgctatctcacagctctgaggaaagagaaggaggccttt
gaaaaactcattcgagagaaggcaagcatggttattcctgaagaaagagaaggaagagat
gaaacaaacttagacctagtaagagatgctacacctgcctccttttctgctgacacacgc
aaagcaggtggacaggaacagaagagcgttcagcaaactataatagtggatatgcgggag
tttcgtagtgagcttccatcactgattcatcgtcgtggtattgacattgagcctgttact
ttggaagttggagattacattttaactcctgatacctgtgtagagcggaaaagtatcagt
gatctgatcggttccttaaataacggaaggctgtatgcacaatgcatttctatgtcccgt
tactataagcgaccaattctcctgattgagtttgatcctaacaaatctttctccttgatt
ccacgaggctctcttcatcaggaaatatccagtaatgatgttacttctaaattaaccctt
cttacgctccatttcccaaagttacgtatcctgtggtgtccctctccccatgctacagct
gaactgtttgaagagttaaaacaaaaccatccccaacctgacgcagaaacagcaatggct
gtcacagcagattctgaaattcttcctgagtcagacaagtataaccccggtcctcaggac
tttctattaaaaatgccaggtgttaatgcgaagaactgtcgtgccttaatgaaccacgtt
aaaagcattgcagagctagtgacactctcaaaggacgaactctccaaaattttgggtaat
gctgccaatgccacgcaactctttgactttattcacctgacctacggagaggcaatatct
aaaggaaaaagcaaaagatga
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