Apaloderma vittatum (bar-tailed trogon): 104268018
Help
Entry
104268018 CDS
T08559
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104268018 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
avit04990
]
104268018 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
avit04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
104268018 (PDLIM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
Motif
Other DBs
NCBI-GeneID:
104268018
NCBI-ProteinID:
XP_009870396
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
LNDGGKAAQAHVGIGDVVLTIDGISTDGMTHLEAQNKIKACTGNLNMTLQRVASVTKPDL
IHVPKGEPTEVVKPVPIASAVAPKVTATASVAYNKTPRPFGAVTSSKVTSIPSPSSAFTP
AQAAAVAPAPFAAPGLHVNAKPNAEQRSPAPSAAKPAVNVPRQPDPSPSAGDGAQDLAEG
PRRGFRENQGESKQQNGPPRKHIVDTYTEFYHTPTHSDASKKRLIEDTEDWHPRTGTTQS
RSFRILAQITGTDHMKEPEHEAGKKTNDSLEATQPAAFTATSARSMPACPENADLRPAPT
ITASAPALKPTGPSGAAKYSGWQPANQAAPASGWTSNSIKPPGTTPPSEKSATAPQLNEQ
DTLVQRAEHIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKASMAYIGFVEE
KGALYCEVCYEKFFAPECSKCQRKILGEVINALKQTWHVSCFVCVACHNPIRNNVFHLED
GDPYCETDYYALFGTMCHGCEFPIEAGDRFLEALGHTWHDTCFVCSVCSDSLEGQTFFSK
KDKPLCKKHAHSINI
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
cttaacgacggtggcaaggcagcccaagcacatgtggggataggcgatgtggttctcacc
attgatgggataagcacggatgggatgactcatctagaagcacaaaacaagatcaaggca
tgtacaggcaatttgaacatgactctgcaaagagtggcttctgtaacaaaacccgatctt
attcatgtaccaaagggagaacctacagaagtagttaagcctgtgcccattgcctctgct
gttgcacccaaagtcactgccacggcaagcgtggcttacaataaaacaccgaggccattt
ggagccgtaacctcctccaaagtcacctccatcccgtcaccgtcctccgccttcacccca
gcccaggcggcggctgtcgccccagccccgtttgctgctcccggactgcatgttaacgcc
aagcctaacgctgagcagcggtcgcctgcgcccagcgctgctaaacctgcagttaatgtc
ccacggcagcccgacccgagcccctctgccggcgacggcgcccaggatctagccgagggg
ccgcgacgaggattcagagaaaaccagggggagagtaaacagcaaaatggccccccacgg
aagcacattgtggatacctatacagagttttaccacacacccacccacagcgatgccagc
aagaagcggctgattgaggacactgaagactggcacccccggacaggcaccacccagtcc
cgctccttccgcatccttgcccagatcacgggcactgatcatatgaaggaaccagaacat
gaagctggaaagaagactaatgattccctggaggctacccagcctgctgcttttacggcc
acctcagccaggagcatgcccgcctgcccagaaaacgcagacctaagacctgctcccacc
atcaccgcgtctgctccagccctcaagccaacgggaccctctggcgctgccaagtactcg
ggctggcagcctgcaaaccaagcagctcctgccagtggatggacatcaaacagtattaaa
ccacctggaacaactcctccgagtgaaaaatctgcaacagcacctcagctaaatgagcaa
gacacgttggttcagagggcagagcacattccagcaggaaagcgtactcccatgtgtgcg
cactgtaatcaagtcattagaggacccttcttggtggctttggggaagtcgtggcatcca
gaggagtttaactgtgctcattgcaaagcttccatggcttacattggatttgtggaagag
aaaggggcgctgtattgtgaggtctgctatgagaagttctttgcccctgagtgttcaaag
tgccagaggaaaatccttggggaagtaataaatgctttgaaacaaacttggcacgtttcc
tgcttcgtgtgtgtggcctgtcataaccccatccgcaataatgtcttccacttagaagat
ggggatccctactgtgagacggattactatgccctctttggtacaatgtgccacggctgt
gaattccccattgaagctggagacaggtttcttgaagctctgggccacacttggcacgac
acttgctttgtatgctcagtatgtagtgacagtttggagggtcagactttcttctccaag
aaggacaagccactgtgcaagaaacatgctcactctatcaacatctga
DBGET
integrated database retrieval system