Apaloderma vittatum (bar-tailed trogon): 104268226
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Entry
104268226 CDS
T08559
Symbol
SYNE3
Name
(RefSeq) LOW QUALITY PROTEIN: nesprin-3
KO
K21761
nesprin-3
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104268226 (SYNE3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
avit03036
]
104268226 (SYNE3)
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
104268226 (SYNE3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin_SYNE1_2
SYNE3
Spectrin
Spectrin_SYNE1
CCDC39
TM-like_Thioredoxin-like_C
Prominin
Motif
Other DBs
NCBI-GeneID:
104268226
NCBI-ProteinID:
XP_009867891
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MTQQLQDEFDSSVENAEAWMKAIQERLRINDNTKGPRSALEARLRETEKIRALEPEGSLK
MDMVLVKADAALRSISEDKKHEVLSKLKDIKALWEETAIYITHCHSRIEWVWLHWSEYLK
AQDEFYAWIHNMRVTLEPDIELQLGLKEKQWQLSHAQVLLNDVLNQSVLLERLLEEAASL
FIRIGDPSVDEDVQKKMRVEYEGIKQEAQSRVKLLEKITKEHEQYSTNVNEFQSWLDGVT
ERLSCCIGEATKSSTEEKLKALKGIAKNIRSGGKKWKHLENQCTEVIQNTSPLGAERMKD
ELEELRKALEKLKLLSSEEEERLLKIQQSERAYESQARQLEADVQELRKDLQRLENDLDP
GEGEKTEDEFVTLWRKCNATRGALAAEESKVERLKTQLKELLRFSQDVQPHAESVVSAIQ
QYQSVRGKTSKMSNDTETQLRRFFQNPLQDFRHWKLSVQMLLETPEPALSHIEAALAESS
QFKEKLMTLQLKKDLLNNVLGEEKSKSFLQEVAEASKDREILHKSLLQSKSKLQNLISQH
KDFDAGFTSLQKKLSAIKAKLDLEKEPQPDLLGKKTQLQRFQMIQDDLAELAIQMEEVEK
LIQSNTTHRHEMSQLSSDSQALKRSLEMMIQESEEHVQKHWAYNDKLSDLQQWITVTREK
IDSFQDADGEQNTEGKVADLERWIAEFPDKEIQLHLVEAHGQLVMENSSPEETAHVQAEL
DQLKESWRSLKEMATGLLKKWQLNRPVAGKKKIAFVDSRWMFGPAFHTLDVDPKHKQESI
GEGQNMSSHLKLLQNFEEWLQGENAKLTEIPTVTSSSAKEIKERQSKLEELQSRVPDGQR
LFEDLLHLHPVIGSSEDLEDLRYRWMLYKSKLKESMSSLSPGSLEEPDRLRKEXSGRIHA
YVHRQCFPRPIYSS
NT seq
2743 nt
NT seq
+upstream
nt +downstream
nt
atgactcagcagctacaggatgaatttgacagtagtgtggagaatgcagaagcttggatg
aaggccatccaagagaggctgaggatcaatgacaacaccaagggacctcgatcagcccta
gaagccaggctaagagagaccgagaaaatacgtgcactggaaccagaaggcagcttgaaa
atggacatggttcttgtgaaggctgatgctgctcttcgcagcatcagtgaggataagaag
catgaggtactgtctaaactgaaagacattaaggccttgtgggaagagacagccatatac
attactcactgtcacagccgtattgagtgggtctggctgcactggagtgagtacctgaaa
gcccaagatgagttttatgcatggattcacaacatgagggtgaccttggagcctgacatc
gagttgcagcttggcttaaaggagaagcagtggcagctgagccatgctcaggttctgctt
aacgatgtcttaaatcagtcagtcctgctggaaaggctgctagaggaagctgcttccttg
ttcatcaggataggtgaccccagcgttgatgaggatgttcagaagaaaatgagggtggaa
tatgaaggaatcaagcaagaagctcagagcagagtgaaactgcttgaaaagataaccaag
gaacatgagcagtacagcactaacgtcaacgagtttcaatcgtggctggacggtgtgaca
gaaagattaagctgctgcattggagaagcaacaaagtcttcaacagaggaaaagttaaag
gcgctgaagggaattgccaaaaacattaggagtggtggaaagaaatggaagcacctagaa
aatcagtgtacagaggtgattcagaatacctcccctcttggagccgagagaatgaaggac
gaacttgaagagctaagaaaagctttggagaagttgaaactgctgagtagtgaggaggag
gagagattgctcaagatccaacagtcagaaagggcctatgagtcccaagccagacaatta
gaagcagatgtccaggagttgagaaaagatctacagagactagaaaatgacctggaccct
ggggaaggggaaaagactgaagatgagtttgtaactctgtggagaaaatgcaatgcaaca
agaggagctctggctgcagaagagtccaaggttgagaggctgaagactcaacttaaggaa
ctgctacggttttcccaggatgtgcagccacatgctgagagtgttgtctctgcaatacag
cagtatcaaagtgttagaggcaagacatctaaaatgagcaatgacacagaaacgcaactg
agaagatttttccaaaatcccctgcaagattttcgacactggaagctatcggtccagatg
ctcctggagactccagagccagcgctgtctcacattgaggctgctctagctgaaagctcc
cagttcaaagagaagttgatgacactacagctgaagaaagatttgctaaacaatgtcctc
ggtgaggaaaaatcaaagtctttcctgcaagaagtagccgaagcttcaaaggacagagaa
attctacacaaaagtctgctgcaaagcaagagcaaactccagaatttgatatcacaacat
aaggactttgatgctggtttcacatccttgcagaagaaattatctgccatcaaagccaaa
ttagatctagagaaggaaccacagcctgacctgttgggtaaaaagacacagctccagaga
ttccagatgatccaagatgacttggcagagcttgcgattcaaatggaggaggtagagaag
cttattcagtcaaataccacacacaggcatgaaatgagccaactttcatctgactcccag
gccctgaagagatcattggagatgatgatacaggagagtgaagagcatgttcagaagcat
tgggcatataatgacaaactctctgacctacagcagtggatcacagtaaccagggagaag
attgattccttccaggacgctgatggagagcagaacaccgagggcaaggtggcagacctc
gagagatggatagctgagtttccagataaggagatccagttacaccttgtggaagctcat
ggccagctggtcatggagaattcttccccagaggagactgcccatgtccaggcagagctg
gatcagctgaaggagtcatggagatcactgaaggagatggcaactggtctcctcaagaag
tggcagttaaatagaccagtggctggtaagaagaaaatagcatttgtggacagcagatgg
atgtttggacctgctttccatactttagacgtagatcccaagcataagcaggagagcata
ggagaagggcaaaatatgagcagccacttgaagcttctacaaaactttgaagagtggtta
caaggagaaaatgccaaactgactgaaattcctacagtaacttcgtcttctgcaaaggaa
attaaggaacgccagagcaaactggaggagctgcagtctcgtgtgcctgatggtcagcgt
ctctttgaggaccttcttcatcttcatcctgtcattggaagctctgaagatctggaggac
ctgcgttaccgatggatgctctacaaatctaagctgaaagagtccatgagttcactgagt
cctggatctttggaagaaccagacagattgagaaaggaatgaagtggtagaattcatgcc
tatgtacataggcagtgctttccaaggcccatctattcttcct
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