Apaloderma vittatum (bar-tailed trogon): 104268556
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Entry
104268556 CDS
T08559
Symbol
DHX15
Name
(RefSeq) LOW QUALITY PROTEIN: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104268556 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
avit03041
]
104268556 (DHX15)
03009 Ribosome biogenesis [BR:
avit03009
]
104268556 (DHX15)
Enzymes [BR:
avit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104268556 (DHX15)
Spliceosome [BR:
avit03041
]
Complex A
U2 snRNP components
U2 related factors
104268556 (DHX15)
Complex B
104268556 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
104268556 (DHX15)
Ribosome biogenesis [BR:
avit03009
]
Eukaryotic type
90S particles
Helicases
104268556 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Flavi_DEAD
AAA_25
AAA_29
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
104268556
NCBI-ProteinID:
XP_009864598
LinkDB
All DBs
Position
Unknown
AA seq
759 aa
AA seq
DB search
LRIXVSYFLLCLLTHFRKDRDRDRDRDDRSKDRDRDRDRDRDRDRERDKEKDLRPTSNSG
YYASAGLASIKPAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDILIRHQSF
VLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQE
VGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVL
KEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAI
RTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPPQQ
QQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESL
LVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKK
LGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI
ASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQ
NHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTG
YFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPE
WLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
ttaagaatttaagtatcttattttctgctgtgtctcttaactcattttaggaaagatcgt
gaccgggacagggatcgtgatgaccgttctaaagatcgtgacagggatcgtgacagagat
agagatcgtgacagagaaagggacaaggaaaaagatttgcgacctacatctaactctggc
tattacgcatctgctgggttagcaagtataaaaccagcaatgattccacacagtattaac
cctttcacaaatctcccccatacaccacgatattatgacatcctgaaaaaaaggctgcaa
cttcctgtctgggaatacaaagaaagatttacggatattttgattaggcatcagtcgttt
gtgctggttggagagactgggtctggtaaaacgacacagattcctcaatggtgtgttgac
tacatgcgctcattacctggaccaaagaggggagtagcatgtacccagcctaggagagta
gctgcaatgagtgtggcgcagcgggttgctgatgagatggatgtcatgctgggccaggag
gttggttactccattcgatttgaagactgcagtagtgcaaaaaccatcttgaagtacatg
actgatggtatgttacttcgtgaagcaatgaatgatcctttgctggagcgctatggtgtt
ataattcttgatgaggcccatgaaagaacactggctactgatattttgatgggagttttg
aaggaagttgtaagacaaagatctgatttgaaggttatagttatgagtgccactttagat
gccggcaagtttcagatctattttgataactgtccacttctaactatcccgggtcgcacc
catcctgtggagatattctatactccagaaccagaaagggactacctagaggctgccatt
cgaacagtgatccaaattcacatgtgtgaagaagaggaaggagatcttttactctttctt
actggacaggaggagattgatgaagcctgcaagaggataaaacgtgaaattgatgattta
ggccctgaagttggtgacataaaaatcattccattgtattccacccttcctccgcagcag
cagcaaaggatttttgaacctcccccacctaaaaaacaaaatggagcaataggaagaaag
gttgttgtgtccactaacattgctgagacatcattaacaatagatggtgttgtgtttgta
attgatcctggttttgcaaaacagaaggtgtacaatcctcgtatcagagtggagtctctc
ttggtgactgcgatcagcaaagcttctgctcagcagcgagctggccgtgctggtcgtact
agaccggggaagtgtttcaggctttatacagagaaggcttacaaaacagaaatgcaggac
aacacataccctgaaattttgagatctaacttaggatctgtagtattgcagctcaagaag
cttggtatagatgatttggtgcactttgattttatggatcctccagctcctgaaactctg
atgagagccctagagcttttgaactatctggctgctttaaatgatgatggagacttgact
gagttgggatccatgatggctgaatttccactggacccacaactggctaaaatggttatt
gcaagttgtgactacaactgctctaatgaggtcctatctattactgccatgttgtcagtc
ccacagtgttttgttcgccccacggaagcaaagaaagcagcagatgaagccaagatgaga
tttgcccacatagatggagatcatttgacgttgctgaatgtctaccatgctttcaaacaa
aatcatgagtcggttcagtggtgttatgacaacttcattaactacaggtccctgatgtct
gcagacaatgtacgccaacagctgtcacgaatcatggatagatttaatttgcctcgtaga
agcacagattttaccagccgagactattacatcaacataagaaaggcattagttaccggg
tatttcatgcaggtggcacatttggaacgaacagggcattacttaacagtaaaggataac
caagtggtgcagttgcatccctccactgttcttgatcataaaccagaatgggtgctctat
aatgagtttgtccttacaacaaagaattacatccggacatgtacagacatcaagccagaa
tggctggtgaaaattgcccctcaatattatgacatgagcaattttccacagtgcgaagca
aagagacagttggatcgcatcattgccaaacttcagtccaaggaatactcacagtactga
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integrated database retrieval system
