Apaloderma vittatum (bar-tailed trogon): 104268808
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Entry
104268808 CDS
T08559
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
104268808 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avit03019
]
104268808 (DDX3X)
03041 Spliceosome [BR:
avit03041
]
104268808 (DDX3X)
03036 Chromosome and associated proteins [BR:
avit03036
]
104268808 (DDX3X)
Enzymes [BR:
avit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104268808 (DDX3X)
Messenger RNA biogenesis [BR:
avit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104268808 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
104268808 (DDX3X)
Spliceosome [BR:
avit03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104268808 (DDX3X)
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
104268808 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104268808
NCBI-ProteinID:
XP_009870857
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
FSGLDLNSSDSQSEGSSSSKGRYIPPHLRNREASKQGFDSGGWSSSRDKDAYSSFGARSD
RGAKSSFFDRGNGSRGGRYEERGRGGDYDRSGFGRFDRGGNSRWSDKSDEDDWSKPLPPS
ERLEQELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFSDVDMGEIIMGNIELTRYTRP
TPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGDALRAMKENGRYGRR
KQYPISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVAT
PGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSA
TFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEPDKRSFLLDLLNATGKDSL
TLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAAR
GLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEA
KQEVPSWLENMAYEQHHKGGGSRGRSKSSRFSGGFGARDYRTSSGSGSSSFSSSRSTSSR
SGGSGSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWGN
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
ttttctggtctagacttgaattcttcagactctcagagtgaaggaagctcttcaagcaaa
ggccgatacattcctcctcatttgcggaacagggaagcttcgaaacagggttttgatagt
ggtggctggagttctagcagagacaaggatgcatacagcagctttggtgcacgatctgac
cgtggagcaaaatccagcttctttgaccgtggaaatggatcaagaggaggaagatatgaa
gagcgtggaagaggtggtgactatgataggagtggctttggtagatttgaccgtggtggg
aacagccgctggtctgataaatcagatgaagatgactggtcaaagcctcttcccccgagt
gaacgcctggaacaagagctcttttcaggaagcaatactggcattaactttgagaaatat
gatgacattcctgttgaagcaacaggcagcaactgtcctccacatattgaaagtttcagt
gatgttgacatgggagaaattattatgggaaacattgagctcacgcgctacacccgtcct
actccagtccagaaacatgcaatacctattattaaagaaaagagagacttgatggcctgt
gctcagacagggtctgggaaaacagctgcatttcttctaccaatattgagccagatctat
gcagatggccctggtgatgccttgagagctatgaaggagaatggaagatatggccgccgt
aagcagtatccaatctcgctggtcttggctcccactagagaactggctgtgcagatctat
gaggaagccagaaagtttgcataccgctccagagttcgtccctgtgttgtatatggtggt
gcagatattggtcagcagatacgtgacttggaacgtggatgtcacttgcttgtagcaact
ccaggacgactggttgatatgatggagaggggaaagattgggctggatttctgcaagtac
ctagtgcttgatgaagctgacagaatgcttgatatgggatttgaacctcaaattcgtcga
attgttgaacaagatactatgccaccaaaaggagttcgtcatactatgatgttcagtgct
actttccccaaggaaatccagatgctagctcgtgacttccttgatgagtatatcttcctg
gctgttggcagagtaggttctacatctgagaatatcacgcagaaagtagtctgggtggaa
gagccagacaaacgatcttttctgcttgacctgctaaatgccacaggcaaggattctctg
actctggtgtttgtggaaactaaaaagggtgcagatgctcttgaggacttcttgtaccat
gaaggatatgcctgcacaagtatacatggagatcgctcccagagagacagagaggaagca
ctgcaccagttccgctcgggcaagagcccaattcttgttgcgacagcagtagcagcaaga
ggactggatatctcaaatgtaaagcatgtcataaactttgacttgccaagcgacattgaa
gagtatgtacatcgtattggtcgtacaggccgtgtcggaaacctaggtcttgccacctca
ttcttcaatgagaggaacataaacatcaccaaggacttgcttgatcttcttgttgaggct
aagcaagaagtaccatcttggctggaaaacatggcttatgaacagcatcacaaaggaggt
ggcagccgtggacgatctaagagcagtagattcagtggaggatttggtgccagagactat
cggacaagtagcggttctggtagcagtagctttagtagcagtcgatcaaccagcagccgc
agtggtggaagtggcagcagaggatttggaggtggtggttatggaggcttctacaacagt
gatggatacggaggaaactataactcccagggggttgactggtggggcaactga
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integrated database retrieval system
