Apaloderma vittatum (bar-tailed trogon): 104269040
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Entry
104269040 CDS
T08559
Symbol
TBPL1
Name
(RefSeq) TATA box-binding protein-like protein 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104269040 (TBPL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avit03000
]
104269040 (TBPL1)
03021 Transcription machinery [BR:
avit03021
]
104269040 (TBPL1)
Transcription factors [BR:
avit03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
104269040 (TBPL1)
Transcription machinery [BR:
avit03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104269040 (TBPL1)
RNA polymerase III system
TFIIIB
104269040 (TBPL1)
RNA polymerase I system
SL1/TIF-1B
104269040 (TBPL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-GeneID:
104269040
NCBI-ProteinID:
XP_009870460
LinkDB
All DBs
Position
Unknown
AA seq
183 aa
AA seq
DB search
MEADSDVALDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATI
WSSGKVICTGATSEEEAKLGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEF
TKNNRPHASYEPELHPAVCYRIRTLRATLQIFSTGSITVTGPNVKAVASAVEQIYPFVFE
SRK
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagacagtgatgttgcattggacattttaatcacaaatgtagtgtgtgttttt
agaacaagatgtcatttaaatttgcggaagatcgcattagagggagcaaatgtgatatac
aagcgtgatgttgggaaagtattaatgaagcttagaaaacctaggattacggccaccatt
tggtcctcaggaaaagttatttgcacaggagccacaagtgaagaagaagctaaacttggt
gccagacgattagctcgtagtctacagaaactaggttttcaggtaattttcacagatttt
aaagttgtgaatgttttagcagtgtgcaacatgccctttgagatcagattgccagaattt
acgaagaataacagacctcatgcaagttatgaaccagaacttcatcctgccgtgtgttac
agaataagaactctcagagctaccttacagattttttccacaggcagtatcacagttaca
gggccaaatgtaaaggctgttgccagtgctgtggaacagatttacccatttgtatttgaa
agcaggaagtaa
DBGET
integrated database retrieval system
