Apaloderma vittatum (bar-tailed trogon): 104269549
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Entry
104269549 CDS
T08559
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
104269549 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avit03019
]
104269549 (MYO5C)
04131 Membrane trafficking [BR:
avit04131
]
104269549 (MYO5C)
03029 Mitochondrial biogenesis [BR:
avit03029
]
104269549 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
avit04812
]
104269549 (MYO5C)
Messenger RNA biogenesis [BR:
avit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
104269549 (MYO5C)
mRNA cycle factors
P-body specific factors
104269549 (MYO5C)
Membrane trafficking [BR:
avit04131
]
Others
Actin-binding proteins
Myosins
104269549 (MYO5C)
Mitochondrial biogenesis [BR:
avit03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
104269549 (MYO5C)
Cytoskeleton proteins [BR:
avit04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
104269549 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
104269549
NCBI-ProteinID:
XP_009869352
LinkDB
All DBs
Position
Unknown
AA seq
1709 aa
AA seq
DB search
YNRVWIPDNDEVWQSAEITKNYKAGDRFLHVQLEDGTELNYPVDPAALPPLRNPDILVGE
NDLTALSYLHEPAVLHNLKVRFMESKLIYTYSGIILVAINPYKQLPIYGDAIIHAYSGQN
MGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYTMRYFATVSKSSSNAH
VEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDRSYQIIGANMRTYLLEKSRVVF
QSENERNYHIFYQLCASAMQPEFKHLKLGSAEEFNYTRMGGSPVIEGVDDRANMVETQKT
FALLGLKGDFQMDVFKMLAAILHLGNVEITAVGDERSSISLEDKHLNIFCELLDLKRDKM
AQWLCHRKIVTTSETVIKPMTRAQAVNARDALAKKIYSHLFDFIVERINQALQFPGKQHT
FIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDIPWTLIDFYD
NQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNTLFEKPRMSNMSFIIQ
HFADKVEYKSEGFLEKNRDTVHEVLIEILKESKFHLCANFFQDNPVSVSPFSSTINIKSA
RPVLKPPNKHLRMTVGSKFRSSLSLLMVTLNATTPHYVRCIKPNDEKLPFEFDSRRVVQQ
LRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQQELSINDKKQICKTVLQRLIQDHN
QYQFGRTKIFFRAGQVAYLEKLRSDKLRYACITIQKSIRGWLQRKKFLRIKQAAVIIQQY
FRGQRTVRQAITARTLKQTWAAIIIQKYCRGYLVRRLCQLIHVAAVTIQAYTRGFLARKK
YRKMLEEHKAVILQKYARAWLARRRFQNIRRFVLNIQLSYRVQQLQKKIEEQSRENHGLL
ERLTSLASTHVNDMEIIQKLELDLEKATAQKRTYEEKGKKYKEDSEQKILKLENENKELQ
QQKETLEIKLQEKTEEMKEKMDDLTRQLFSDVQKEENQRMILEKNFQNQKQDYEKEIEML
KGEIKILKEEKTRLQHQIQQEIVIQDSLKMEVGQLTKQAQKIPELQKEIELLQTQKLDIE
KQAQSQKRELREKMSEVTKQLLESYDFEDVRSRLSTEDLEHLNEDGELWFAYEGLKKATR
VLESHFQSQKEIYENEIEGLNLKVEHLSQEINHLQKLFREENDIKDGIRLEVSRLTSENL
VIPDLKQQVSELENQKLDLENRLQEQTVKLKGKVTNDVDIKEKERLKVTTQEIKGLSNGL
MQDETQDEVQSKMKQETTRLTVENMDLEEKLDMKDRIIKKLEDQIKTLTKTIEKGNEAHM
PPLSREYIGMMEYKKEDEERIIQNLILDLKPRGVVVNMIPGLPAHILFMCVRYADYLNDA
DMLKSFMNVTIDGIKQVVKEHSEDFEMLSFWLSNTFYFLNCLKQYSGEEEFMKCNTPRQN
KNCLKHFDLSEYRQILSDLAIHIYHQFITVMENNIQPMIVPGMLEYESLQGISGLKPTGF
RKRSSSIDDTDTYTMTSILQQLSYFYSTMCQNGLDSELLKQTVKQLFFLIGAVTLNSLFL
RKDMCSCRKGMQIRCNISYLEEWLKDKNLQSSNAKETLEPLSQAAWLLQVKKITDEDAKE
ICEHCTSLSAVQIVKILNSYTPIDDFEKRVTPSFVRKVQAMLNNREDVPQLMLDTKYVFQ
VTFPFTPSPHALEMIQVPSSFKLGFLTRI
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
tacaatagggtttggatccctgataatgatgaagtttggcagtctgcggaaatcacgaaa
aactacaaggctggagaccgttttctccatgtgcaattagaagatggaactgaactgaat
taccctgttgatccagctgccttgccacccctacgaaatcctgacatactcgttggcgaa
aatgatctcaccgcgcttagttatctccatgaaccagctgttctacacaatcttaaagtt
cgttttatggaatctaagcttatctacacctatagtggaataattttggttgcaataaac
ccctataaacagttgccgatatatggagatgctattatccatgcatatagtgggcaaaac
atgggggacatggatccacatatatttgctgtggcggaagaagcatacaagcaaatggca
agaaataacaaaaatcagtctattatagtcagtggagaatcaggagctggaaagactgtg
tctgcaagatacactatgaggtactttgccactgtgagtaagtcaagcagcaatgcacat
gtggaggataaagtgttggcatccaatccaataactgaggctgtcggcaacgcaaaaacc
acacggaatgataatagcagtcgatttggaaaatacactgagatcagttttgatcggagt
taccaaatcattggagctaatatgagaacatacctgcttgaaaaatccagagttgtcttt
cagtcagagaatgagagaaactatcatatattttatcagttgtgtgcatctgctatgcaa
cctgaatttaagcatcttaaattaggaagtgcagaagaatttaactacacaagaatgggt
ggcagcccagtaatagaaggagttgatgacagagcaaatatggtggagactcagaagaca
tttgccttgctgggtctgaagggggattttcagatggatgttttcaaaatgctggcagca
atcttacacttgggcaatgtggaaataacagctgttggagatgaaagatcatccatcagt
ctggaagataaacatctcaatatattctgtgaactcctggatttaaaacgtgacaaaatg
gcacagtggttgtgccaccgaaagattgtcactacctccgagactgtaataaagccaatg
acaagagctcaggctgttaatgcaagggatgccctggcgaagaagatctattcacattta
tttgacttcattgtggaaagaattaaccaagctttgcagttccctggcaaacaacatact
ttcattggtgttttggacatttatggctttgaaacatttgatgtgaacagttttgaacag
ttttgcatcaattatgccaatgaaaagctgcagcagcagttcaacctgcatgtctttaaa
cttgaacaagaggaatacatgaaggaagatatcccatggactttaatagacttttatgac
aaccagcctgtcattgaccttattgaagctaaaatgggaattttagaacttctggatgaa
gagtgcttgttacctcatggaacagatgaaaactggcttcagaagctctataataatttt
gtgaataaaaacacactctttgaaaagccgaggatgtcgaacatgtctttcatcattcaa
cactttgctgataaggtggaatataaaagtgaaggatttctggaaaaaaacagagataca
gtacatgaagtattgattgaaatcttgaaggagagcaagtttcatctgtgtgcaaatttt
tttcaagacaatccagtgtccgtttcacctttcagttcaactataaacatcaaatctgca
agacctgttctcaagccacccaacaaacacctccggatgacagttggcagtaagttccgg
agctctttgtctttgcttatggtgactcttaatgcaacaacccctcactacgtacgatgc
ataaagccgaatgatgagaagttgccttttgagtttgattcgagaagagttgttcagcaa
ctgcgagcgtgtggtgttctggaaactattcgaattagtgcacagagctacccatccagg
tggacttacattgagtttttcagccgttacagcattcttatgacacagcaggagctctcc
ataaatgataagaagcagatttgcaagactgttttgcagcggctaatccaggatcataac
cagtatcagtttgggagaacaaaaattttcttccgagcagggcaggttgcttacttagaa
aaactgcgatcagacaaactgagatacgcatgcatcacgatccaaaagagcattcgaggc
tggctgcagcggaagaaatttcttcgcataaaacaagcagctgttataatccagcagtat
ttccgagggcagcggactgtgcggcaagctataactgcaagaactctgaagcaaacgtgg
gcagctataattattcagaaatactgtcgaggttacttggtccgtagactttgccagctc
atccatgtggctgctgtaacaattcaagcttatacaagaggatttctagcaagaaaaaaa
taccggaagatgcttgaagaacacaaggctgtgatcctccagaaatacgcccgtgcatgg
cttgccaggcgcagatttcagaatattcgtcggtttgtattgaatatccagctttcatac
agagttcagcagctgcagaagaagatagaagagcagagtagagaaaatcatggtttgctg
gaacgattgaccagcctggcttcgactcacgtgaatgacatggaaataatacagaaactc
gaattagatcttgaaaaggcaactgctcaaaagagaacgtatgaagagaaagggaaaaaa
tataaagaggacagtgaacagaaaatcctaaaactcgagaatgagaataaagaattacaa
caacagaaagagaccttggaaataaagctccaagagaaaactgaggaaatgaaagagaaa
atggatgatctcacaaggcaactgttcagtgatgtacaaaaagaagaaaaccagagaatg
atacttgagaaaaatttccaaaatcagaagcaggactatgaaaaggaaatcgaaatgctc
aagggagaaattaaaattctgaaagaagaaaaaactcggctacaacatcaaattcagcaa
gaaattgtcattcaggacagcttgaaaatggaagtaggacaacttacaaaacaagcacag
aaaatacctgagttgcaaaaggaaattgaactgctgcagacacaaaaattggatattgaa
aagcaggcccagtcacagaagcgagaactgagggaaaagatgtcagaagttacaaaacag
cttcttgaaagttatgattttgaagatgtaagaagcagactctccacagaggatttggaa
cacttaaatgaggatggggaactgtggtttgcttatgagggcttgaaaaaagctacaaga
gtattggaaagtcattttcagtctcagaaagaaatatatgaaaatgagatcgaaggcttg
aacttaaaagttgaacatcttagccaagaaattaatcatctacagaagttatttcgagag
gaaaatgacataaaggatggcattcgattggaagttagcaggctaacttcagaaaacctg
gtgatcccagatcttaagcagcaagtttctgaacttgaaaatcaaaaattagatcttgaa
aaccgtcttcaagagcaaactgtaaagttgaaaggtaaagtaacaaatgatgtagatata
aaagaaaaagagagactgaaagtcacaacccaagaaattaaggggctgagcaatggtcta
atgcaagatgaaacccaggatgaagtacaaagcaagatgaagcaagagacaactcgactt
actgtggaaaacatggatcttgaagaaaaactagacatgaaagacagaataataaaaaaa
ttggaggatcaaatcaaaactcttaccaagactattgaaaaaggaaatgaagctcatatg
ccacctttgtccagagagtacattggaatgatggagtacaaaaaagaggatgaagaaagg
atcatccaaaatctgatcctcgatttaaagccacgtggagttgtagttaatatgatacct
ggccttccagctcacatcctcttcatgtgtgtgaggtatgcagattatctgaacgatgct
gacatgctgaaatctttcatgaatgtaaccattgatggtatcaaacaagttgttaaggaa
cattcagaagactttgagatgttgtccttttggctttccaatacattttattttcttaac
tgtttgaagcagtacagtggggaagaggaatttatgaagtgtaacacgccacgtcagaat
aagaactgtttgaagcattttgatctctcagaatacagacaaattcttagtgatttggcc
attcatatctatcaccagttcattactgtaatggagaacaacattcagcccatgatcgta
ccaggcatgctggaatatgaaagtcttcagggaatttctggcttgaaacctacagggttc
cgtaaacggtcttctagcatagatgacacggacacctatacaatgacctctatcctgcaa
cagctcagctatttttatagcaccatgtgccagaatggcttggactctgagctgctgaag
cagacagtgaagcagcttttctttctgattggagctgtcaccctcaatagcctcttcctc
cgcaaggacatgtgctcatgtagaaaaggaatgcagataagatgtaatatcagctacttg
gaggaatggcttaaggacaagaatcttcaaagtagtaatgccaaagaaactttggagccg
ctatctcaagcagcctggcttctgcaggtcaaaaagatcacagatgaggatgccaaggaa
atatgtgaacactgcacgtctctttctgctgtgcagatagttaagatcctcaactcgtac
actccaatagacgattttgagaaaagagtgactccatcgtttgttcgtaaagtccaggct
atgctaaacaatcgtgaggatgttccacagctgatgcttgataccaaatatgtctttcaa
gtgacgtttcctttcaccccctctccacatgccttggaaatgatacaagtccccagcagc
ttcaaacttggctttctcacaaggatttaa
DBGET
integrated database retrieval system
