Apaloderma vittatum (bar-tailed trogon): 104269584
Help
Entry
104269584 CDS
T08559
Symbol
CNGA1
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
104269584 (CNGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
avit04040
]
104269584 (CNGA1)
Ion channels [BR:
avit04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
104269584 (CNGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Ion_trans_2
Tim54
RNA_pol_Rpc4
Connexin
Menin
Zip
CDC45
SlyX
CIS_TMP
DUF913
Sec62
DUF2828
Motif
Other DBs
NCBI-GeneID:
104269584
NCBI-ProteinID:
XP_009875686
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MKVGVIETHHSHVTVPSVVVQDTSEDPGPMVKWGNRYHITVILLFPRQWYLPGALARYNI
NNNSNKDEEKKKKKEKKSKSEKNKDGGTQKKEKKEKTKNKDKSKKKENKEEKKKDIFIID
PAGNVYYNWLFCITMPVMYNWTMIIARACFDELQHDYLVAWFIIDYISDAIYVADMFVRT
RTGYLEQGLLVKEEQKLQEKYKASFQFKLDFLSIIPTDLLYFKLGLNYPELRINRLLRVA
RMFEFFQRTETRTNYPNIFRISNLVMYIVIIIHWNACVYYSISKAIGFGADTWVYPNISD
PEFARLTRKYVYSLYWSTLTLTTIGETPPPVRDSEYFFVVIDFLVGVLIFATIVGNVGSM
ISNMNAARAEFQARIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKAVDEREVLKYLPD
KLRAEIAINVHLETLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICRKGDIGREMYII
KEGKLAVVADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLFCLSKD
DLMEALTEYPDAKAMLEEKGKQILMKDGLLDIEIANLGSDPKDLEEKVTYMERAMDRLQT
KFARLLAEYEAAQQKLKKRLTQIEKILKPVIEQEFTDLGEADPSTDKPGVSKPE
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaggagtgattgagacccatcactctcatgtgactgttcccagtgtggtagtg
caagatacaagtgaggaccctgggccaatggtcaaatggggaaacaggtatcatataact
gttattttgctgttccctaggcaatggtatctacctggtgcacttgcacgctacaacatt
aacaacaatagtaataaagatgaagagaagaaaaagaaaaaagaaaagaagagcaagtca
gaaaaaaataaggatggaggaacacaaaagaaggaaaaaaaggagaaaaccaaaaataaa
gataagtccaagaagaaagaaaataaagaggagaagaagaaagatattttcattatagat
ccagcaggaaatgtgtattacaactggttgttctgcatcacaatgcctgtcatgtacaac
tggaccatgattattgctagagcctgttttgatgagcttcagcacgactatttagtggca
tggtttattattgattacatttctgatgccatctatgttgctgacatgtttgtacggaca
agaacaggttacctggagcaaggtcttctggtgaaagaagaacaaaagcttcaagagaaa
tataaggcatctttccaattcaaattagattttctgtcaatcataccaactgatctctta
tactttaagttaggactgaattacccagaattaagaataaacagactactgagagtagct
cggatgtttgaattcttccagcgaacagaaacaaggacaaactacccaaatatcttcaga
atctctaaccttgtcatgtacattgtgattattatccactggaacgcctgcgtgtactac
tcaatctcaaaagccattggatttggggctgacacatgggtctaccccaacatctccgat
cctgaatttgcccgtctgactagaaagtatgtctacagtctctactggtcaacattgacg
ctaactactatcggggaaacacctcctcctgtaagagattctgagtatttcttcgtggta
attgacttcttggttggagtattgatttttgctaccatcgttggtaacgtgggctctatg
atctccaacatgaatgctgccagggcagagtttcaagcaaggattgatgctatcaagcag
tatatgcactttcggaacgtgagtaaagacatggaaaaaagagttataaagtggtttgac
tacctgtggacaaataaaaaggctgtggatgaaagggaagtcttgaagtatctgccagat
aaactaagagcagagattgcaatcaatgttcacctggaaacactaaaaaaagttcgaatt
tttgcagactgtgaagctggtctgttggttgaactggttttgaagctccagcctcaagta
tacagtcccggagattatatttgcagaaaaggagatattgggcgagagatgtacattatc
aaagaaggcaagctggcagtagtcgctgatgatggaattacccagtttgtggtccttagt
gatggcagctattttggagaaatcagcattcttaatatcaaaggtagcaaagctggcaat
cgaagaacagccaatattagaagtattggatactcggacttgttttgtctgtcgaaagat
gatctcatggaggctttaacagagtatccagatgcaaaggctatgctggaagaaaaaggc
aagcaaatcctaatgaaagatgggttgctcgacattgaaattgcaaatttaggaagtgat
cctaaagatctggaagagaaggtcacctacatggaaagagcaatggacagattgcaaaca
aagtttgccaggttgttggctgagtatgaagctgcacaacagaaactgaaaaaaaggctt
acacaaattgagaaaatattgaagccagttatagagcaagaattcacagacttaggagaa
gcagatccatccacagataaacctggagtgtcaaaaccagaataa
DBGET
integrated database retrieval system
