Apaloderma vittatum (bar-tailed trogon): 104269600
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Entry
104269600 CDS
T08559
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104269600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avit03019
]
104269600
Messenger RNA biogenesis [BR:
avit03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104269600
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
104269600
NCBI-ProteinID:
XP_009869684
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
DTTGKQEDGPISGHTESSHPLQDAPQENRPVSNEDREMSQHALPSGEDEEDDSDSDSDDD
DVKVTIGNIKTGAPSYMGTPMNLNLKTGRGYGASASAKLQPKGIDLDAAGNINGLPVIEV
DLDSFEDKPWRKPGADLSDYFNYGFNEETWKAYCEKQRRLQLGLDPAPPISTENKITVQQ
GRTGNAEKEVENNIIKTEFKTDFLALVGGRMKAGPPPNRKLGGTIDVIGGQAGTIRRVEG
RRRDKHASEENPIQVLGDHGSKPQPPQQPQQPSQPQQPPQQQPFAPPAGPPPPPLAGPPP
PHFLHPPPPVTSVPPPLHPPGLPPPGPIPGLFPPPLAPPPALLIPTLDGQPASYNNRQPP
PFGYNSADSGFISYPPISTSHTPWVTTVDKGTSSSSSSHWEYSGSRRERERERERERERE
RDRDRTPTTSEYNNDDERYRYYSRERSYDFERDYRRSRDRSREREDRHRERRHRDKEESS
KHKSSRR
NT seq
1466 nt
NT seq
+upstream
nt +downstream
nt
atgacaccactggtaagcaagaagatggaccaatttctgggcacacagaatcttctcatc
ctttgcaagatgctcctcaggagaaccggcctgtcagcaatgaagaccgagaaatgtcgc
aacacgcccttccaagtggtgaagatgaagaagacgacagcgacagtgacagcgatgacg
atgacgtgaaagttactattggcaacattaaaacgggagcgccgtcgtacatgggaactc
ctatgaatctaaacttaaaaacgggtagaggctatggagcatctgcttcagccaagttgc
agcccaaaggtattgacttagatgccgcagggaatataaatggattgccagttatagaag
tggatttagattcatttgaagacaaaccgtggaggaaaccaggtgctgatctttccgatt
actttaactatggattcaatgaagaaacatggaaagcttattgtgagaagcagcgacggc
tccagcttggactggatcctgctcctcccatcagcacagagaataagatcacggttcagc
aaggacgaacaggaaatgccgaaaaagaagtggaaaacaacatcatcaaaacagaattca
aaaccgacttcttggctctggtgggaggacgcatgaaggctgggcctcctcctaatagga
agctgggtgggacaattgatgtgatcggtggccaggcaggcacgattaggagagtagagg
gaagacgacgtgataagcatgcctctgaggaaaacccaattcaggtccttggagaccacg
gcagtaagccacaacccccacagcagccccagcagccgtcacagccccagcagccacccc
agcagcagccgttcgcaccaccagcaggcccaccgccgcccccgctcgctgggccacctc
cgccacacttcctccaccctcctccaccagttacttctgttccacctcctctgcatcctc
caggtcttccgccgcctggccccattccagggttgttcccgcctcctctggcaccgccac
cagctctcctcattccaaccttggatgggcagccagccagctacaacaacaggcagcctc
ctccctttggctacaattctgcagattcaggtttcatcagctacccccccatttccacgt
cccacacgccctgggtgaccacggtggacaaaggcacaagcagttccagcagcagccatt
gggagtactcaggctccaggcgtgagagggagcgggaacgggagcgggaacgggaacggg
agagagaccgagaccgcactcccaccacgagcgaatacaacaatgatgatgaacgatacc
gctactacagccgggagcgcagctacgactttgagcgcgactaccgccggagtcgagatc
gcagcagggagcgagaggatcgtcaccgggagcgcaggcacagggacaaagaggagagca
gcaagcataaatcttcgagacggtaa
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integrated database retrieval system
