Apaloderma vittatum (bar-tailed trogon): 104269602
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Entry
104269602 CDS
T08559
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit00310
Lysine degradation
avit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104269602 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avit03000
]
104269602 (PRDM2)
03036 Chromosome and associated proteins [BR:
avit03036
]
104269602 (PRDM2)
Enzymes [BR:
avit01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
104269602 (PRDM2)
Transcription factors [BR:
avit03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104269602 (PRDM2)
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
104269602 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-H2C2_2
zf-C2H2_ZNF462_1st
zf-C2HE
zf-C2H2_11
PyrI_C
zf-MYST
Motif
Other DBs
NCBI-GeneID:
104269602
NCBI-ProteinID:
XP_009866267
LinkDB
All DBs
Position
Unknown
AA seq
1530 aa
AA seq
DB search
MARLSRISRIVFQVGSYQVEDPAGSSSHVGPFRNLMKKTQENKNKGKKAVDTNQKKADLD
STSADMRDSKESHKEEGEMPSVSAVLSLEQTAVIQEMVNQDVLPKLIIPSPASEPQVVSE
DKQGEAVNCASDDLDDDEEEEEDEEEDEEEIEDTSMPKESAEMPLICEEKLDSMEEHKST
SEESPESSPKKKLVVKIPKARGESNGDVQESFMFPCQHCERKFTTKQGLERHMHIHISTI
NHAFKCRYCGKAFGTQINRRRHERRHEAGPRRKPFLTLTSSHHLDNVAENQVIVEDGLKD
DLNVSSLVQDPVVLDSEKVSQEMSNSAFAEENKEPKELHPCKYCKKVFGTHTNMRRHQRR
VHERHLIPKGVRRKGFFTEEPPLQMEQPPPVQNVYIASTEIEEEGEVDDVYIMDISSNIS
ENLNYYIDGKIQSNSSTSNCDVIQMESNSADLYGLNCIISPVTVEISSNVKVTQTHMNEP
PKEPSGSGSNESKKRRTASPPLVPKVKTEIDPEPITPTGSLSLPLSISTESLPFHKEKGV
YLSSKLKQLLQTQDSKKITPSSEIPKLGPSVTSSPILPPVSSRFKRRTSSPPSSPQHSPV
LRDFVKSAEGKTVWNENIRGSKMPKLESHSNSPAWSLTGREEKDTLSPLCFEDYKIGKDW
TAAPTFGNVCNQQPLDLSSGVKQRADVKNKNQVPWESVLDLSVHKKPCSDVEIREYKENS
MQPTCSGVKKKKPTTCMLQKVLLNEYNGTDVAPDSALGTNRSTSPSKAPEPQAEPDRDPS
LSASSSVDTQPLSSSVSPAPQAPAAPSMCQLPPLLTPTNPPSPPPVLTVATSPPPLLPTV
PLSIPDVSASATNTSCCPSPLSNTTTQSPLPVLSPTVSPSPSPVPSVEPLISAASPGPPT
LSSSSSSSSSSSFSSSSSSSSPSPPPLSVVSSVVSSADNLENTLPIIKQEEAENEQQKAR
EDPHTSSDSGAVQETFNKSFVCNVCESPFLSIKDLTKHLSIHAEEWPFKCEFCVQLFRDK
TDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDKECTHHEFESGTLRPQNF
TDPSKANMEHMQSLPEESLEPSKEEEDDDDLNDSSEELYTTIKIMASGVKSKDPDVRMGL
NQHYPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFTTAIRCTKCGKSVDNMPELHKH
ILACASASDKKRYTPKKNPVPLKQTVQPKNGLVVLAGPGKNAFRRMGQPKRLNFNVEISK
MSSNKLKISALRKKNQLVQKAILQKKKSAQQKAELKNNPAESDSHICPYCNREFTYIGSL
NKHASYSCPKKPISPSSKKNSSKKSASSSPASSEKGNSQRRRTADAEIKMQSMQPHLGKT
RARTSGPAQIQLPSASFRSKQNVKFAPPMRSKKPNSSSSLRNSSPVRVSKMSHVDGKKTK
VVAKNSSSGISSKASRKLHVRIQRNNKTVLPSKSAVASKKKADRFAAKSRERIGGPITRS
LQQAANAEATENKRDESSTKQELKDFRNLL
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggctttcgagaatttcccggattgtttttcaagtagggagctaccaagtggag
gatccagctggcagtagcagccatgtaggacccttcaggaacctgatgaagaagactcag
gaaaacaaaaacaaggggaagaaggctgtggatacaaaccagaaaaaggctgatttggat
tctacttctgcagatatgagggattctaaagagagtcacaaagaggaaggtgaaatgccc
tctgtttctgctgtactgtccctagagcaaacagctgtgattcaggagatggtaaatcaa
gatgtgcttccaaagctgatcatccccagccctgccagtgaaccacaagtggtatctgaa
gacaaacaaggagaagcagtaaactgtgcatcagatgatttagatgatgatgaagaggag
gaggaggatgaagaggaagatgaagaggagatagaagacaccagtatgcctaaagaaagt
gctgaaatgcctttgatatgtgaagaaaagctagactcgatggaagagcacaagagtacg
tccgaagaatctccagagagctctccaaagaaaaaacttgttgtgaaaattccaaaagcg
agaggcgagtccaacggtgatgttcaggaatcgttcatgtttccctgtcagcattgtgag
aggaagtttacaacaaagcaaggacttgaacgccacatgcacatccatatatctaccatt
aaccacgctttcaagtgtcgctattgtgggaaagcctttggtactcaaatcaacaggcga
aggcatgagcggcgccacgaggcggggccgagaaggaaaccattcttaacactaacgtca
tcacaccacttggacaatgttgctgagaaccaagtcattgtggaggatggtcttaaagat
gacctgaatgtttccagtctcgtgcaagaccctgttgtcttggattcagagaaggtttcc
caagaaatgtcaaactctgcttttgccgaggaaaataaggagcccaaagagttacatccg
tgcaaatactgcaaaaaggtttttggcactcacaccaacatgcggaggcatcagcgtagg
gttcacgagcgtcatcttattcccaaaggtgtcagaagaaaaggattctttactgaagag
ccaccgcttcagatggagcagcccccaccagtgcagaatgtatatatagcaagtacagaa
atcgaagaggaaggtgaagtagatgatgtctatattatggatatttccagcaacatctct
gaaaatttaaattattacatcgacggtaaaattcagtccaacagcagcactagcaattgt
gatgtcattcagatggagtccaactctgcagatttatatggactgaattgtataatcagt
ccggtcacggtggaaatctcctcaaatgtaaaggttacgcagacacacatgaatgaacct
ccaaaggaaccctctggcagtgggagcaacgaatccaaaaagaggagaactgccagccct
cctctcgtaccaaaagtaaaaaccgaaatagacccagaacctattactcctactggttcc
ttaagccttcctcttagcatttcaacagaaagcctaccgttccataaagaaaaaggtgtt
tatttgtcatcgaaattaaaacagctgcttcagacacaggacagtaagaagataactcca
tcaagtgaaatccctaaactcggaccttctgttacatcgtcaccaattttgcctccggta
tccagtcggtttaaaagaaggaccagctctcctcccagttctccacagcacagtccagta
cttcgagactttgtcaaatcagctgagggaaaaactgtgtggaatgagaatattcggggt
tcaaaaatgccaaagctagaaagccacagcaactcacctgcttggagcttgacgggaagg
gaggaaaaagacactctgagccctctttgctttgaagactacaaaataggaaaagactgg
acagcagctccgacttttggcaacgtgtgcaaccagcagcccctggatttgtctagtggt
gtgaaacagagggctgatgtcaaaaataagaatcaggttccctgggaatctgttttagat
ttaagcgtacataagaagccttgcagtgatgtagaaattagggagtataaagaaaattcc
atgcagccaacctgcagtggtgttaaaaagaagaagccgaccacttgcatgttacagaag
gttctgctgaacgagtacaacgggacggatgtggccccagacagcgcgctcggcaccaac
aggagcacgagccccagcaaagccccggagcctcaggcagagcctgacagggaccccagt
ctgtcagcgtcgtcttctgtcgacactcagccccttagttcctccgtctcccctgcgcca
caggcgcctgcggccccttccatgtgccagctgcctcccttgttaaccccaaccaaccct
ccttcccccccgcccgtgttaacagttgctacgtcgcctcctccacttcttccaaccgtg
ccactgtcgattccagacgtctctgccagtgccacgaacacttcttgttgtccatcgccg
ctgtctaacactaccacccagtccccactgccggttctttcgcctacggtttctccttct
ccatctcctgtcccttctgttgaaccgcttatttctgctgcttcacctggccctcctaca
ctctcttcctcttcctcctcctcctcttcctcctccttctcctcctcgtcatcatcgtcg
tctccatctccgcctcctctttctgtagtttcttctgttgtttcctctgctgataacctt
gaaaatactctcccgataataaaacaggaagaagctgaaaacgaacaacagaaagcaaga
gaagatcctcatacttcgagtgactctggagcggtgcaggaaacattcaataagagcttt
gtgtgcaatgtctgtgaatcaccttttctttccattaaagacctaacgaagcatttatcc
attcatgctgaagaatggcccttcaaatgtgaattctgcgtgcagctttttagggataaa
acagacttgtcagaacatcgctttctgcttcacggagtaggaaatatctttgtttgctcg
gtctgtaaaaaggagtttgctttcttgtgcaatctgcaacagcaccagcgggatctccat
ccagacaaagagtgcacgcatcacgagtttgaaagcgggactctgagaccccagaacttc
actgaccccagtaaggcaaacatggagcacatgcagagcctgccggaagagtcgttggaa
ccttctaaagaggaggaggatgacgatgatctaaatgattcctccgaagagctttatact
actatcaaaataatggcttccggagtaaaatctaaagatccagatgttcgtatgggcctc
aatcaacactaccccagctttaagccgcctccctttcagtatcaccatcggaaccctatg
ggtattggagttaccgcaacaaacttcactacccacaatattccacagacttttactact
gccattcggtgcacaaagtgcgggaagagtgtcgataacatgcccgagttacacaagcac
atactggcctgtgcgtctgccagtgacaaaaagagatacacccctaaaaaaaatccggtg
ccgctgaaacagacggtgcagcccaagaacggcctggtggtcctagccggccccggcaag
aatgccttcaggcggatgggccagcctaaaagacttaatttcaatgttgagattagcaaa
atgtcctcaaacaaactaaaaataagtgcactgagaaagaaaaaccagctcgtccagaaa
gcgatcttgcagaagaagaaatctgcgcagcagaaggcagaactgaaaaacaacccagcc
gagtccgactctcacatctgcccctactgtaacagagagttcacttacattggaagtttg
aacaaacacgcgtcgtacagctgtcccaaaaaacccatctctccctcctctaaaaagaat
tcgtccaaaaaaagtgccagttcttcaccggcaagcagtgaaaaaggcaacagccagcgc
aggcgaacagcggacgcggagatcaagatgcagagcatgcagccgcacttgggcaagaca
agagcacgaacctcaggacctgctcaaatccagcttccctcggcgtccttcagatcgaaa
caaaacgtcaagtttgcacctcccatgcgatctaaaaagccaaattcgtcctcgtcgctg
aggaactctagtcctgtcagagtgtccaaaatgtcccatgtcgatgggaaaaagactaag
gtggtcgctaagaacagttcctctgggatctcgagcaaagcgtcccggaaattgcacgtc
aggatacaaaggaataataaaactgttctgccgagtaagtccgctgtggcgagcaagaag
aaggcagacaggttcgcggccaagtccagagagaggattgggggacccatcacacggagc
ctccagcaagcggcaaacgcggaggcgacagaaaacaagcgagatgaaagcagtacaaag
caagagctaaaagatttcaggaatctcctgtaa
DBGET
integrated database retrieval system
