KEGG   Apaloderma vittatum (bar-tailed trogon): 104269677
Entry
104269677         CDS       T08559                                 
Name
(RefSeq) contactin-1
  KO
K06759  contactin 1
Organism
avit  Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:avit00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    104269677
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:avit04515]
    104269677
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:avit00537]
    104269677
Cell adhesion molecules [BR:avit04515]
 Immunoglobulin superfamily
  Contactins
   104269677
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:avit00537]
 Others
  104269677
SSDB
Motif
Pfam: Ig_3 I-set ig Ig_2 V-set Ig_5
Other DBs
NCBI-GeneID: 104269677
NCBI-ProteinID: XP_009870430
LinkDB
Position
Unknown
AA seq 559 aa
SEEGNKGYGPVFEEQPIDTIYPEESSDGQVSMNCRARAVPFPTYRWKLNNWDIDLTKDRY
SMVGGRLVISNPEKSRDAGKYVCVASNIFGTVRSSEATLSFGYLDPFPPEERYEVKVREG
VGAVLLCEPPYHYPDDLSYRWLLNEFPVFIALDKRRFVSQTNGNLYIANVEASDKGNYSC
FVSSPSITKSVFSKFIPLIPQADRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPE
LRWSKYLEPLPASAEISMSGAVLKIFNIQYEDEGLYQCEAENYKGKDKHQARVYVQASPE
WVEHINDTEKDIGSDLYWPCVATGKPIPTIRWLKNGASFRKGELRIQSLTFDDAGMYQCI
AENTHGIIYANAELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGT
ELLVNGSRIRIWDDGSLEIINVTKLDEGRYTCFAENNRGKANSTGVLEMTEATRITLAPL
NVDVTVGENATMQCIASHDPTLDLTFIWSLNGYVIDFEKEHEHYERNVMYYLVHRSPLKK
FESHPNGISLSAMSLSVSQ
NT seq 1678 nt   +upstreamnt  +downstreamnt
tcagaggaaggaaacaaaggttatgggcccgtgtttgaggagcaacccatcgataccatc
tatccagaagaatcttcagatggacaagtttcaatgaactgcagagctcgagcagttcct
tttcctacttacaggtggaaactcaacaactgggatattgatctgacgaaggatcgctac
agtatggtgggaggcagacttgttatcagtaacccggaaaaatcaagggatgctggaaaa
tatgtctgtgtagcgtcgaatatctttggaactgtcaggagcagtgaagccactctgagt
tttggatacctggatccctttccacctgaggaacgctatgaggttaaagtgcgagaaggt
gttggtgcagtgcttctctgtgagcccccgtaccactacccagatgatctcagctatcgc
tggcttctaaatgagttcccagtgttcattgctttggacaagcgacgatttgtgtcacag
acgaatggcaatctctacattgcaaatgttgaagcatcagataagggcaattattcgtgt
ttcgtgtccagcccttcaataacaaagagtgtattcagtaaatttattccacttattcca
caggcggatcgtgcaaaagtgtatcctgctgatatcaaggtgaagttcaaggacacgtat
gctctcctggggcaaaacgtaacgctcgagtgttttgctcttggcaatccggttcctgaa
ctcagatggagtaaataccttgaacccctgccagccagtgctgagataagcatgtctggt
gcagttcttaagatcttcaatattcagtatgaggatgaaggactttatcagtgtgaagct
gaaaactacaaaggaaaagataaacatcaagcaagagtttatgtacaagcctctcctgaa
tgggtagaacatatcaatgacacagagaaggatataggcagtgacctatactggccttgt
gttgctacgggcaagcccatcccaacaattaggtggctgaaaaatggtgcctcgttccgg
aaaggtgaactacgaatccaaagtctgacctttgacgatgctggcatgtatcaatgtata
gcagaaaacacccatggaattatttatgcaaatgctgaactgaagattgtggcttcacct
cctacttttgaactgaaccctatgaagaagaaaatcctagcagccaaagggggacgtgta
atcattgaatgcaagcctaaagctgctcccaagccaaaattctcatggagtaaaggaaca
gaactgcttgtaaatgggagccgtatacgcatctgggatgatgggagcctggaaattatc
aatgtcacaaagctggatgagggccgctacacctgttttgcagaaaataaccgaggaaaa
gctaatagcactggtgttctagaaatgacagaagctacaaggattactttagctccgttg
aatgttgatgtcaccgttggagagaacgctaccatgcagtgcattgcatcccatgatccc
acattagacctgacgtttatttggtctctaaatggctatgtaatagattttgagaaagag
cacgaacattatgaaaggaatgttatgtactatttggtgcataggagtcccctgaaaaag
tttgagtcgcatcctaatggcattagtttgtctgcaatgagtctgagtgtcagccaaa

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