Apaloderma vittatum (bar-tailed trogon): 104269677
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Entry
104269677 CDS
T08559
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104269677
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
avit04515
]
104269677
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
avit00537
]
104269677
Cell adhesion molecules [BR:
avit04515
]
Immunoglobulin superfamily
Contactins
104269677
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
avit00537
]
Others
104269677
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
V-set
Ig_5
Motif
Other DBs
NCBI-GeneID:
104269677
NCBI-ProteinID:
XP_009870430
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
SEEGNKGYGPVFEEQPIDTIYPEESSDGQVSMNCRARAVPFPTYRWKLNNWDIDLTKDRY
SMVGGRLVISNPEKSRDAGKYVCVASNIFGTVRSSEATLSFGYLDPFPPEERYEVKVREG
VGAVLLCEPPYHYPDDLSYRWLLNEFPVFIALDKRRFVSQTNGNLYIANVEASDKGNYSC
FVSSPSITKSVFSKFIPLIPQADRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPE
LRWSKYLEPLPASAEISMSGAVLKIFNIQYEDEGLYQCEAENYKGKDKHQARVYVQASPE
WVEHINDTEKDIGSDLYWPCVATGKPIPTIRWLKNGASFRKGELRIQSLTFDDAGMYQCI
AENTHGIIYANAELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGT
ELLVNGSRIRIWDDGSLEIINVTKLDEGRYTCFAENNRGKANSTGVLEMTEATRITLAPL
NVDVTVGENATMQCIASHDPTLDLTFIWSLNGYVIDFEKEHEHYERNVMYYLVHRSPLKK
FESHPNGISLSAMSLSVSQ
NT seq
1678 nt
NT seq
+upstream
nt +downstream
nt
tcagaggaaggaaacaaaggttatgggcccgtgtttgaggagcaacccatcgataccatc
tatccagaagaatcttcagatggacaagtttcaatgaactgcagagctcgagcagttcct
tttcctacttacaggtggaaactcaacaactgggatattgatctgacgaaggatcgctac
agtatggtgggaggcagacttgttatcagtaacccggaaaaatcaagggatgctggaaaa
tatgtctgtgtagcgtcgaatatctttggaactgtcaggagcagtgaagccactctgagt
tttggatacctggatccctttccacctgaggaacgctatgaggttaaagtgcgagaaggt
gttggtgcagtgcttctctgtgagcccccgtaccactacccagatgatctcagctatcgc
tggcttctaaatgagttcccagtgttcattgctttggacaagcgacgatttgtgtcacag
acgaatggcaatctctacattgcaaatgttgaagcatcagataagggcaattattcgtgt
ttcgtgtccagcccttcaataacaaagagtgtattcagtaaatttattccacttattcca
caggcggatcgtgcaaaagtgtatcctgctgatatcaaggtgaagttcaaggacacgtat
gctctcctggggcaaaacgtaacgctcgagtgttttgctcttggcaatccggttcctgaa
ctcagatggagtaaataccttgaacccctgccagccagtgctgagataagcatgtctggt
gcagttcttaagatcttcaatattcagtatgaggatgaaggactttatcagtgtgaagct
gaaaactacaaaggaaaagataaacatcaagcaagagtttatgtacaagcctctcctgaa
tgggtagaacatatcaatgacacagagaaggatataggcagtgacctatactggccttgt
gttgctacgggcaagcccatcccaacaattaggtggctgaaaaatggtgcctcgttccgg
aaaggtgaactacgaatccaaagtctgacctttgacgatgctggcatgtatcaatgtata
gcagaaaacacccatggaattatttatgcaaatgctgaactgaagattgtggcttcacct
cctacttttgaactgaaccctatgaagaagaaaatcctagcagccaaagggggacgtgta
atcattgaatgcaagcctaaagctgctcccaagccaaaattctcatggagtaaaggaaca
gaactgcttgtaaatgggagccgtatacgcatctgggatgatgggagcctggaaattatc
aatgtcacaaagctggatgagggccgctacacctgttttgcagaaaataaccgaggaaaa
gctaatagcactggtgttctagaaatgacagaagctacaaggattactttagctccgttg
aatgttgatgtcaccgttggagagaacgctaccatgcagtgcattgcatcccatgatccc
acattagacctgacgtttatttggtctctaaatggctatgtaatagattttgagaaagag
cacgaacattatgaaaggaatgttatgtactatttggtgcataggagtcccctgaaaaag
tttgagtcgcatcctaatggcattagtttgtctgcaatgagtctgagtgtcagccaaa
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