Apaloderma vittatum (bar-tailed trogon): 104270083
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Entry
104270083 CDS
T08559
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03013
Nucleocytoplasmic transport
avit03015
mRNA surveillance pathway
avit03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104270083 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
104270083 (EIF4A3)
03015 mRNA surveillance pathway
104270083 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avit03019
]
104270083 (EIF4A3)
03041 Spliceosome [BR:
avit03041
]
104270083 (EIF4A3)
03009 Ribosome biogenesis [BR:
avit03009
]
104270083 (EIF4A3)
03012 Translation factors [BR:
avit03012
]
104270083 (EIF4A3)
Enzymes [BR:
avit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104270083 (EIF4A3)
Messenger RNA biogenesis [BR:
avit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104270083 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
104270083 (EIF4A3)
Spliceosome [BR:
avit03041
]
Complex C
Other components
EJC/TREX
104270083 (EIF4A3)
Ribosome biogenesis [BR:
avit03009
]
Eukaryotic type
90S particles
Helicases
104270083 (EIF4A3)
Translation factors [BR:
avit03012
]
Eukaryotic type
Initiation factors
eIF-4
104270083 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
Cas3-like_C_2
AAA_19
AAA_22
Motif
Other DBs
NCBI-GeneID:
104270083
NCBI-ProteinID:
XP_009862636
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
SQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACI
GGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQI
YDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVERE
EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMK
EFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFV
KNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
994 nt
NT seq
+upstream
nt +downstream
nt
gtcccagtcaggaacggggaagacggcaactttctccatctctgttctgcaatgcctgga
tatacaggttcgcgagacccaggcattgatcttggcaccgactcgggagctggctgtaca
aattcagaagggtcttcttgctctgggagactacatgaatgtccagtgtcatgcctgcat
tggagggaccaacgtgggtgaagatatccgaaaactcgattatgggcagcacgtcgttgc
tggcactccaggccgtgtgtttgatatgattcgtcgtcgaagtttaagaactcgtgccat
caaaatgctggttttggatgaagcagatgaaatgctcaataaaggttttaaggagcagat
ttatgatgtgtacagatacttgcctccagctacacaagtggttctgatcagcgccacttt
gcctcatgaaattctggagatgaccaacaaattcatgacagaccccattcgcatcctggt
gaaacgtgacgagttgacccttgaaggaatcaagcagttttttgtggctgtggagaggga
agaatggaagtttgacacattgtgtgatctctatgacacgctcacaatcacccaggctgt
catcttctgtaacaccaagagaaaggtagactggctcacagagaagatgagagaagccaa
cttcacagtttcgtccatgcatggggacatgccacagaaggagagagagtccatcatgaa
agagttcagatctggtgcaagccgagtccttatttcaacagatgtttgggctagaggcct
ggatgttccccaggtgtccctcatcattaactacgacttacccaacaacagagaactcta
catacacagaattggccggtcaggcagatacggccgaaaaggtgtagcgatcaactttgt
gaagaatgacgacatccggatcctgcgagacatcgagcagtactactccacccagatcga
cgagatgcccatgaacgttgctgatcttatctga
DBGET
integrated database retrieval system
