Apaloderma vittatum (bar-tailed trogon): 104270091
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Entry
104270091 CDS
T08559
Name
(RefSeq) LOW QUALITY PROTEIN: very low-density lipoprotein receptor-like
KO
K20053
very low-density lipoprotein receptor
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
avit04131
]
104270091
Membrane trafficking [BR:
avit04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
104270091
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
104270091
NCBI-ProteinID:
XP_009862648
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
PTKEVVVALSDTILGIAFLFFIEGARAKCEESQFPCSNGRCIPSLWKCDGDEDCSDGSDE
TACVKKTCAESDFVCTSGQCVPNRWQCDGDPDCEDGSDESAELCHLRTCRVNEINCGPQS
TQCIPVSWKCDGEKDCDSGEDEENCGNVTCSPAEFTCSSGQCISKSFVCNGQDDCSDGSD
ELECTPPTCGVHEFQCKSSTCIPISWVCDDDADCSDHSDESLEQCGRQPAPPVKCSASEV
QCGSGECIHKKWRCDGDPDCKDGSDEINCPSRTCRPDQFRCEDGNCIHGSRQCNGVRDCL
DGTDEANCNNVIQCSGPGKFKCRSGECIDVNKVCNQQRDCKDWSDEPLKECNINECLVNN
GGCSHICRDLVIGYECDCPAGFELTDRRTCGDIDECQNPGICSQICINLKGGYKCECSRG
YQMDLATGVCKAVGKEPCLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDADIAEQKLY
WADFSQKAIFSASIDTRDKVGTHVRILDNIQSPSGIAVDWIYKNIYWSDSTAKTISVASL
DGTKRKVLFFSELKEPASIAVDPLSGFMYWSDWGEPAKIEKAXFDRQQLVTTEIQWPNGI
ALDLVKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSHMFLPHPLALTIFEDRVYWIDGENE
AVYGANKFTGSELVTLVNNLNDAQDIIVYHELVQPSGRNWCEENMANGGCSYLCLPAPQI
NEHSPKYTCACPVGYFLQEDGLRCAGFNVSGTTSEVAAAGGTSAAWTVLPLLLLVMAAVA
GYFMWRNWQQKNMKSMNFDNPVYLKTTEEDLTIDIGRHSCSVGHTYPAISVVSTDDDMV
NT seq
2522 nt
NT seq
+upstream
nt +downstream
nt
ttcccacaaaagaagttgttgtggccctgtctgacacaatattgggaattgccttccttt
ttttcattgaaggtgcgagagcaaagtgtgaagaatcccagttcccatgtagtaacggac
gctgtattccgtcactctggaaatgtgatggtgatgaggactgttcagatggcagtgatg
agactgcttgtgtgaagaagacatgtgctgaatctgacttcgtgtgcaccagtggtcagt
gtgtgcctaacagatggcagtgtgatggagatccggactgcgaggatgggtctgacgaga
gtgctgaactgtgccatttgagaacatgccgagtaaatgaaatcaactgtggtcctcagt
caacccagtgtatcccagtgtcctggaaatgtgatggtgaaaaagactgtgacagtggag
aagatgaagagaattgtggcaatgtgacttgtagtccggcagagttcacatgcagcagtg
ggcagtgtatttccaaaagcttcgtctgcaatggccaagatgactgcagtgatggcagtg
atgagctggagtgtacacctcctacctgtggagttcatgagttccagtgcaagagctcca
cttgcatccctatcagctgggtctgtgatgatgatgctgactgctctgaccactcagatg
aatctctggagcaatgtggccgccagcctgcccctcccgtgaagtgctctgccagtgagg
tgcaatgtggctcaggtgaatgtatccacaaaaagtggcgttgtgatggagatcctgact
gcaaggatggaagcgatgaaatcaactgcccttctcggacctgtagaccagaccaattca
gatgtgaagatgggaactgcatccatgggagtaggcagtgcaatggtgtaagggactgtc
tggatggtactgatgaagcaaattgtaacaatgttattcagtgctctggacctggcaaat
tcaaatgccgaagtggagaatgcatagatgtcaataaagtgtgtaaccagcagagagact
gcaaggactggagtgatgagcccctcaaggagtgtaacataaatgaatgtctggtcaaca
atggtggatgctctcatatctgcagagatcttgttattggctatgaatgtgactgtccag
ctggctttgagcttacagaccggagaacctgtggagatattgatgagtgtcagaaccctg
gtatttgtagtcaaatctgtatcaacctgaaagggggctacaaatgtgaatgtagccgtg
gctatcagatggatcttgctactggagtgtgcaaggcagtggggaaagaaccatgtctaa
ttttcacgaaccgccgggatatcaggaagatcggacttgagaggaaagaatatattcagc
tagtagagcaactaagaaacactgtagctctagatgctgatattgctgagcaaaagcttt
actgggctgacttcagccaaaaagcaatattcagtgcctctattgatacccgtgataaag
ttggaacacatgtgagaatcctggacaacatacagagcccttctggaattgctgttgact
ggatttataagaacatctactggtctgactcaactgcaaagaccatttcagtggctagcc
tagatggcacaaaaagaaaggttttgtttttctctgagctgaaagagccagcttctattg
ctgtagatcctctctctggctttatgtactggtcagactggggtgagccagcaaaaattg
aaaaagcanaatttgacagacagcagcttgtgacaacagaaatccagtggcctaatggaa
ttgctctagatcttgtgaaaagccgtctgtactggcttgattctaaactgcatatgctgt
caagtgtggacctgaatggccaggaccgtagaattgtgctgaaatctcatatgtttcttc
ctcatcctcttgctctaacaatatttgaggaccgtgtgtactggattgacggagagaatg
aggcagtctatggtgccaacaaatttactggatctgaattggttaccctagtgaacaacc
tcaatgatgcacaggacatcattgtttatcatgagcttgttcagccttcaggtaggaact
ggtgtgaagagaacatggcaaatggaggctgcagctacctgtgcctgcctgctcctcaga
taaatgaacattctccaaagtatacctgtgcatgtccagttggatacttcttgcaggagg
atggtctgaggtgtgcagggttcaacgtcagtggtacaacatctgaagtagctgcagctg
gaggaacatcagcagcttggactgttcttcctctcttattgctggtgatggctgcagtag
ctggctacttcatgtggcgtaactggcagcagaagaacatgaaaagcatgaattttgata
atcctgtctacctgaaaactacagaagaggacctcacaattgatattggaaggcacagct
gttcagtaggacacacctatcctgcaatatctgttgtgagcacagatgatgatatggtgt
ga
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