Apaloderma vittatum (bar-tailed trogon): 104270122
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Entry
104270122 CDS
T08559
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
avit04990
]
104270122 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
avit04990
]
Other domain-containing proteins
Patched domain-containing proteins
104270122 (PTCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
104270122
NCBI-ProteinID:
XP_009862690
UniProt:
A0A091N3L2
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
LHSAVTRIQVQRPGFNYTFAHICILNNDKTCIVDDIVHVLEELKAARSSNRTNFAITYPI
THLKDGREVYNGHQLGGVTVHSKDRVKSAEAIQLTYYLQAINSLNDMVAEKWESIFCDTV
ELFQKSNRKVKMYPFTSSSLKEDFQKTSRVSERYLITSLVLVVTLAILCCSMQDCVRSKP
WLGLLGLLTVTLATLTAAGIINLTGGKYNSTFLGIPFVMLGHGLYGTFEMLSSWRKTRED
QHVKERTAAVFADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAIFFNYLYV
LSFYGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKPAWYRFLLTAKFSEDTTDSEETST
YESHLLVWFLKRYYCDWITNTYVKPFVVLFYLVYISFALMGYLQVSEGSDLSNIVATATR
TIEYTTAQQKYFSNYSPVIGFYIYESIEYWNTSVQEDVLEYTKGFVRISWFESYLNYLRK
LNISTGLPKKNFTDMLRNSFLKTPQFAHFSEDIIFSKKYNNEVDVVASRMFLVAKTMETK
REELYDLLETLRKLSLTSKVKFIVFNPSFVYMDRYASSVGAPLQNSCISALFLLFFSAFL
VADSLINVWLTLTVASVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPLLSTFVL
GKEFTRTKWVKNALEVHGVAILQSYLCYIVGLIPLAAVPSNLTRTLFRCLFLIALVTFFH
CFAILPVILTFLPPSKKKRKEKKNPENREEIECVEMVDMDSTRVVDQITTV
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
ttgcactctgctgtgaccaggatccaagttcaaagacctggtttcaattacacgtttgcc
catatatgtatcctgaacaatgacaagacatgcatagtggacgacatagtgcatgtactg
gaggaattaaaggctgctcgttcttctaatcgaactaattttgcaatcacttatccgatt
actcacttaaaggatggcagggaagtgtataacgggcatcagcttggtggggttactgtg
cacagcaaagaccgggtgaagtctgcagaagccattcagctcacctactacttgcaggca
atcaactccttgaatgacatggtggcagagaagtgggaatccattttttgtgacactgtt
gaacttttccagaaatccaacaggaaagtcaaaatgtatcctttcacttcttcttcgctg
aaggaggatttccagaagacgagcagggtgtcagaacgctacctgatcacaagcttggtc
cttgtggtcaccttggccattctctgctgctccatgcaggattgtgtccgcagcaaaccc
tggcttggcctgctgggattgctgaccgtgacccttgccaccctgactgcagctgggatc
atcaatctcactggtgggaaatacaattccaccttcctgggaatccccttcgtcatgtta
ggtcatgggttatatgggacttttgaaatgttgtcctcctggagaaaaactagagaagac
caacacgttaaagagaggactgccgccgtgtttgcagactccatgctctcgttttctctc
accactgccatgtacctggtcacttttggaataggtgccagtcctttcactaacattgaa
gcagccaggattttctgctgcaactcctgtattgcaattttcttcaactacctctatgta
ctctccttttatggttccagcctggtgtttactggctacatagaaaacaactaccagcat
agtatcttctgcagaaaggtaccaaagccagaggtattgcaagagaagcctgcatggtat
aggtttcttctgacagccaaatttagcgaggacacgacagattcagaggaaacgagcact
tatgagagtcatcttttggtgtggttcctgaaacgctattattgtgactggataacaaac
acttacgtcaagccttttgtagttctcttttaccttgtttatatttcctttgccttaatg
ggctacctgcaggtcagtgaagggtcggacctgagcaacatcgtagcgaccgcgacacgg
accattgagtatacgactgcccagcagaagtatttcagtaactacagcccagtgattggg
ttctacatctacgagtcgatagagtactggaacaccagtgtgcaggaggacgtgctggag
tataccaagggctttgtcaggatatcttggtttgaaagctacttaaattaccttaggaaa
ctcaacatatctaccggactgcccaagaagaacttcactgatatgttgaggaactccttc
ctgaagacccctcagtttgcccatttttcagaggatatcatcttttccaagaaatacaac
aacgaagtcgatgtcgtggcctccaggatgttcttggtggccaagacaatggaaaccaag
agggaagaactttatgacctcctggagacactgaggaagctctctctcacctccaaggtg
aaattcatcgttttcaatccatcgtttgtgtacatggatcgttatgcctcttcagtggga
gcccccttacaaaactcctgcattagtgctttatttctgctcttcttctctgcattcctg
gtggcagactctctgatcaatgtctggctcactctaactgttgcctcagttgaatttgga
gttataggttttatgacgttgtggaaagtggaactagattgtatatctgtgttgtgctta
atttacggaattaattatacgattgacaactgtgctccactgttatcaacctttgtcctg
ggcaaagagttcacaagaactaaatgggtgaaaaatgccctggaagtgcatggggtagct
attttgcagagctacctctgctatatcgttggtctgattcctcttgcagctgtgccttca
aatctgacccgtacactgttcaggtgcttgtttttaatagcattagtcaccttctttcac
tgctttgccattttacctgtgatactgactttcctgccaccgtccaaaaagaagaggaaa
gagaagaagaatcctgaaaaccgtgaggaaatagagtgtgttgaaatggtggatatggat
agcacccgagtggttgaccaaattacaacagtttaa
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