Entry |
|
Name |
(RefSeq) RNA exonuclease 1 homolog
|
KO |
K14570 | RNA exonuclease [EC:3.1.-.-] |
|
Organism |
avit Apaloderma vittatum (bar-tailed trogon)
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:avit00001]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104270150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:avit03009]
104270150
Ribosome biogenesis [BR:avit03009]
Eukaryotic type
Pre-60S particles
RNases
104270150
|
SSDB |
|
Motif |
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Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
826 aa
MSSFRSEHVFPEKLRIPSAVELEDSDAGWDLDIDEPPQAVNKKPRISSNCTNRSWDKEVA
EILCDSAMADIPGSTEEKSEEINVLRKNTKVFKKSEKLHNVSLKANDVNNDIVKVLKLKD
ALAYSEEKHTSSTASFEAGIWNGILKQGHAENSVFVEASVQQHTSEDCVTSRGVTPSALG
TGHSSKDGTTVQRPYKGIINREENQSIEENRANNNPEEKYSYPSVYLNKKEHEISLLSSS
AEETECRWEETEVSDSDDPLEECRKIFEEFEGEARRKNRDKQDHGGEVEFNSLETKLNAP
GKKRRIAHRAKFDVHNRSEVELFTVCPQQWGCDVEIQQIHCQAMDSAAAVRGGQALMDTA
SEQKTMSGLSATPFQSIGPLASVNLLEVQPIEISSAQVSTLLEGDVVVAAIPSGPSLSSF
MRTIPVSYKKKRSLPTPASKVPPETRQRYISFFFAECIKICSTMNEAFDKALIAEQSVYD
RCGNKKMYLNFAVQALKKLRDHGQLSNCRSSSDSGSVKSEEEQALTGYALYEHLKDYLLT
EEQLNENNFPRPDPEKNGSAILSRIVNNADYDAFKRVCCRCGEVYAVTSSGEHRRKEECN
YHSGRVLKQRFPADMEKHYSCCQRLVGSPGCQVAKLHVHDGRGEKLEGFMKTLTKSPPLD
GNYGVYALDCEMCYTTHGLELTRVTVVDAKLQIVYDTLVKPDGKVVDYDARLSGVKEDDL
KKATISLRAVQAILLNLFSADTVLIGHCLEKGLFVLKLIHDKVVDTSVVFPHRLGLPHRR
TMRSLMAEYLRKIRQDDVAGHNSREDATACMELILWKVKEDNRIRK |
NT seq |
2481 nt +upstreamnt +downstreamnt
atgtcttcatttaggagtgagcatgtgttcccagagaagttaagaattccttctgcagtg
gaacttgaagactctgatgctggatgggatcttgacattgatgagccaccacaagctgtt
aataaaaagccaagaataagtagtaactgtacaaacaggagctgggacaaagaagtagca
gaaatattatgcgatagtgctatggcagatattcctgggtctacagaagaaaaatcagaa
gaaattaatgttttgcggaagaacaccaaagtttttaaaaagtctgaaaaactacataat
gtttctctgaaagcaaatgatgtaaacaatgatatagtgaaggttttgaagctcaaagat
gcccttgcttatagtgaggagaaacatacatcttcaactgcttcttttgaggcaggcata
tggaacggaattctgaagcaagggcatgcagaaaacagtgtatttgttgaagcatctgtt
cagcagcatactagtgaagactgtgtgaccagtagaggagtgacaccatctgccttgggt
actggtcactcatcaaaagatggaactacagttcaaagaccttataagggaataataaat
agagaggaaaaccagagcatagaagaaaacagggctaataataacccagaagaaaaatac
tcatatccatctgtatacttaaacaagaaagaacatgaaataagtctactgagttcatct
gctgaggaaacagaatgcaggtgggaggagacagaggtctctgactcagatgatccttta
gaggagtgtaggaaaatttttgaagagttcgaaggagaagcacgaaggaagaacagggat
aagcaggaccatggaggagaagtagagttcaattcattagaaaccaaactaaatgctcct
ggaaaaaagagaagaattgcacacagagcaaaatttgatgtacacaacagaagtgaagtg
gagcttttcacagtatgtcctcagcagtggggttgtgatgtggaaattcagcagatacac
tgtcaggcaatggactctgctgctgcagttagagggggacaagctcttatggatacagcc
tctgaacagaagactatgtctgggttgtcagctactccctttcaaagcattggacccctg
gcctctgtaaatctgcttgaagttcagcccattgaaatcagcagtgctcaagtgtcgaca
ctactggaaggagatgttgtagtagcagcaataccctctggaccttctcttagctcattc
atgaggacgattcctgtgtcatacaagaaaaagcgttcccttccaacaccagcatccaag
gtaccacctgaaacaagacagcgatatataagtttcttttttgcagaatgcatcaaaatt
tgtagtacaatgaatgaggcttttgacaaggccctgatagcagagcaatctgtttatgat
cgttgtggaaataaaaaaatgtacttgaattttgctgtgcaagctctcaaaaagctgaga
gatcatgggcaacttagtaactgcagatcttccagtgactctggatctgtaaaatcagag
gaagagcaagcactcacaggttatgcgctatatgagcatttaaaagattatctcctgact
gaggaacaattgaatgaaaataatttccctcgaccagatcctgaaaaaaatggtagtgct
atactttctaggattgtaaacaatgctgattatgatgctttcaaaagagtgtgctgtagg
tgtggtgaagtgtatgctgttacttcttcaggagaacatagacgtaaagaagaatgcaac
tatcattctggtagagtattgaaacaaagatttccagctgacatggaaaaacactacagc
tgctgtcagagattagttgggtctcctggatgtcaggttgcaaagcttcacgttcatgat
gggagaggggagaagttggaaggctttatgaagacactcactaaatcaccgcctcttgat
ggaaactatggtgtatatgctctggactgtgagatgtgttatacaactcatggcttggaa
ctaactagagtgacagtggttgatgcaaagctacagattgtttatgacacacttgttaag
ccagatggtaaagttgtagactatgatgcaagactctctggagtaaaagaggatgatctg
aagaaagccacaatatctcttcgggctgtacaggcaatactgctaaacttgttcagtgca
gatacagttttaattggacactgcttagaaaagggcttatttgtgcttaagctaattcat
gacaaagtagtggacacatcagtagtgtttcctcatcggctaggtttgcctcacagaaga
acgatgagaagtctgatggctgaatacctcaggaaaattcgtcaagatgatgttgctggt
cataattccagggaagatgcaactgcttgtatggagctaatcctttggaaggtcaaggag
gacaacagaattaggaaatag |