Apaloderma vittatum (bar-tailed trogon): 104270349
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Entry
104270349 CDS
T08559
Name
(RefSeq) pumilio domain-containing protein KIAA0020 homolog
KO
K14844
pumilio homology domain family member 6
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avit03019
]
104270349
03009 Ribosome biogenesis [BR:
avit03009
]
104270349
Messenger RNA biogenesis [BR:
avit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
104270349
Ribosome biogenesis [BR:
avit03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
104270349
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPL
PUF
PUF_NOP9
Arm-DNA-bind_2
Motif
Other DBs
NCBI-GeneID:
104270349
NCBI-ProteinID:
XP_009862979
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MEAKGKRKFMGKSGKAPRGKAPQKKKFKKDNDSGPPKKLLNKGDEVGKPKSISKKFGKGQ
LRPGRTNVKQFKNKQQSEKLAKKRKLQDGEESGSDPKKPKWSDFKRKKKDLKQTRQLNDK
SNYDIIVKSKQIWESVRRKKCDKEKREKLMNELQKLLHGKIKSLAFAHDSTRVIQCFIQY
GNEQQRQETFEELKGSLVELSKSKYSRNIVKKFLMYGTKPQIAEIIKSFKGHVKKMLRHA
EASAVVEYAYNDKAILEQRNMLTEELYGNTFQLYKTPVVPTLDKVLAAQPEKREAILDEM
KQILTPMAQKEAVIKHSLVHKVFLDFFTYSLPKQRSEMIEAIREAVIYLAHTHDGARVAM
HCLWHGTPKDRKVIVKTMKTYIEKIATGEFSHLVLLAAFDCIDDTKLVKQLILSEINSSL
PNIINNKYGKKVLLYLLSPRDPAHFVPEIITLLQQGDGNAHSKKNTELRHRELLEAISSP
LLEYLQEHTQEVVTDKATFVLVTDILRTALGDVQPALDAIANLAAEELVPGGSDGQLHIA
EHPAGHLVLKWLIEQDEKLKECGKEVCFGRTLVERVGIENMKTWAEVNRGAIILCCLLRS
ADQKVANTVKKELKKLVPKLKLNKNVKGVEALLEKLTS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggaagccaagggcaaaaggaagttcatggggaagagtgggaaagcgcctcgtggaaaa
gcgccgcaaaaaaaaaagtttaaaaaagataacgattcgggtccaccaaagaaacttctt
aacaagggagatgaggtaggaaagccaaaatccatttccaagaagtttgggaaagggcag
ttaagacctggaagaaccaatgtcaaacaattcaagaataaacagcaatcagaaaagctt
gcaaagaagaggaagctccaggatggtgaagaaagtgggtcagatcctaagaagccgaag
tggagtgacttcaaaaggaaaaagaaggacttaaagcaaacaagacaacttaatgataaa
agtaattatgacataattgtaaaatcaaagcaaatatgggaaagtgtgagaaggaagaaa
tgcgataaggaaaagcgggaaaagctaatgaatgaactacaaaagcttcttcatggaaaa
attaaaagtctggcgtttgcgcatgattcaactcgagtgatccagtgctttattcagtat
ggtaatgagcagcaaaggcaagagacgtttgaagaattgaaaggtagcctagtagagttg
agcaagtcaaaatattccagaaatattgtgaagaagtttcttatgtatgggacgaaacca
caaattgcagaaataataaaaagctttaaaggccatgtgaaaaaaatgctccgtcatgct
gaagcatctgctgtggtggaatatgcatataatgacaaagctattctggagcagaggaat
atgctgacagaagaactctatgggaacactttccagctttacaagacaccagttgtccca
acacttgataaagtgttagcagctcagcctgaaaagagagaggccatcttggacgaaatg
aaacagattcttacaccaatggcacaaaaagaggctgtgataaaacactcactggtacat
aaagtatttctggactttttcacttacagtctgccgaaacaaagatctgaaatgatagaa
gctatcagagaggctgtcatctacttggcacacactcatgatggagcccgagtagcgatg
cactgcttatggcatggtactcccaaggaccgaaaagtcattgtgaaaactatgaagaca
tatattgaaaaaatagcaacgggtgaattttctcatctggtcttgctggcagcatttgat
tgcatcgatgacactaaactggtgaaacagttaattttatcagaaataaattcttctttg
cccaatataataaacaacaaatatggaaagaaggtcttgttgtacttgctaagtcctaga
gaccctgcacatttcgttccagaaatcatcacacttctgcagcagggagatggaaatgcc
catagtaagaagaacactgaactccgccaccgtgagctcctggaagcaatttcctcgccg
ttgctagaatatttgcaagaacatacccaagaagtagtgacagacaaagctacgtttgtt
ttggttaccgacatcttaagaacagctcttggtgatgtccagccagcactggatgcaatt
gctaatttagcagcagaagagctggttccaggtggcagtgatggacagcttcacattgca
gagcatccagcaggccatctagttttgaagtggttaatagagcaagatgaaaaactgaaa
gaatgtggaaaagaagtttgctttggaagaacgttggtagaacgtgttggtattgagaat
atgaagacctgggcagaagtaaatcgaggtgccattattctctgttgtttacttcggagc
gctgatcaaaaagtggcaaatacagtaaaaaaagaactgaaaaagcttgtcccaaagctg
aagctgaataaaaatgtaaaaggagtagaggcgttattggagaaattgacttcctag
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