Apaloderma vittatum (bar-tailed trogon): 104270420
Help
Entry
104270420 CDS
T08559
Name
(RefSeq) LOW QUALITY PROTEIN: hemicentin-1-like
KO
K17341
hemicentin
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
avit04990
]
104270420
Domain-containing proteins not elsewhere classified [BR:
avit04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
104270420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
Ig_VEGFR-1-like_5th
V-set
EGF_CA
C2-set_2
TSP_1
G2F
VEGFR1-3_N_Ig-like
cEGF
Ig_SEMA-3_4_7A
TSP1_spondin
Ig_PDGFR_d4
C1-set
Ig_6
EGF_3
TSP1_CFP_C
FXa_inhibition
Ig_MYOM1
TSP1_ADAMTS
TSP1_CCN
EGF
Motif
Other DBs
NCBI-GeneID:
104270420
NCBI-ProteinID:
XP_009863086
LinkDB
All DBs
Position
Unknown
AA seq
2921 aa
AA seq
DB search
PLKPDDRVMIQASGRMLQIKEAQVSDTGRYTCLASNIAGEDEMEFDVNIQVPPSFQKPYK
EWETGNTVDAGRGGESKDVIVNNPLSLYCETNAVPPPVLTWYKDGFPLSSSDKVLILPGG
RVLQIPRAQAEDAGRYMCVAVNEAGEDSIHYDVRVLLPPAISGADGDRPEEVTVLVNKAA
AMDCIASGSPSPSITWQKDGHLLAEDDKHTFLSSGRRLQILNSQITDTGRYVCIVENIAG
SAKKYFNLNVHVPPSVIGTNAENLTVVVNNFISLTCEVTGFPPPDLSWLKNGKPISSNTN
TFIVPGARTLQIPRAKLLDGGEYICIARNQAGESQKRSFLTVLVPPSIKDHGGTSLTALN
VRVGAPVVLECESNAIPPPVITWYKNRRIISESANVEILADGQMLRIKSAEVSDTGQYVC
KAINIAGRDDKNFHLNVYVPPNIEGPEQELVNETISNPITFVCDATGIPPPTLMWLKNGK
PIENSDSLEVHVLSGGSKLQIARSQLPDSGTYTCVASNIEGKAQKSYVLSIQVPPDIVGS
EMPSEVSVLLGESIQLVCNANGVPTPVVQWHKDGKTVASDDLQRTRVTPDGSTLNIFRAL
SSDTGKYTCVATNPAGEEDRIFNLNVYVPPTIANNKDEPEDLTALLDTSLNVECTATGTP
PPQINWLKNGLPLSVSSQIRLLSAGQILRVARVQISDTGVYTCVASNRAGVDNKHYNLHV
FVPPSLDNAGGTEDVTVVKGNSASMECLSDGTPAPTMSWFKNGQPVSLGAHLTSSNQGMV
LHFVKAEIGDTGKYTCVASNAAGDSSKHFSLKVLEPPHINGSDEPEELSVIVNNPLELLC
ISSGIPVPKISWMKDGRPLLQNDNVHVLREVLQITSAQVEDTGRYTCLASSPAGDDDKEY
LVRVHVPPNIAGTSGPQDLTVLQNRQVILECKSDAVPPPTISWLKNGELFEGTPRVRILS
SGRYLQINNAELSDTASYTCVASNIAGKMTREFVLTVHVAPTIRSSSPTAAVHVNASAVL
ECVAEGVPSPRVTWRKDGAVFTGNNTRYSMLEDGSLHIHSAQVTDTGRYVCMATNPAGTE
RRRIDLQVLVPPTIAPGHTNITVTVNVQTTLPCETTGIPRPTISWKKNGHLLSVDQNQNM
YRLLSSGSLVIISPTVDDTAVYECSVSNDAGEDRRAVELTVQVPPSIADEATDLLVTKLS
PVVIPCTTTGVPVPSVHWTKNGVKLLPRGEGYRILSSGAVEIPAAQLAHTGRYTCVARNT
AGSAYRHATLHVQEPPVIQTQAGVLDVIVNNPVLLPCEATGTPRPIITWQKEGINVITTG
NSYMVLPSGSLQIAKSAVEDAGTYMCVAQNPAGTALGKIKLKVQVPPVIKSHLKEYVVPV
DQSVTLQCEAEGYPGPEISWHKDGQPITESMSKRILSTGALQIVFVQPSDAGRYTCVAAN
LAGSSTSSAELAVHIPPKIRSSDTQYTVTEDSQAVLSCVAEGIPPPTINWKKNNMLLTEK
VGKYRSLPDGDLILDNVAPDDAGSYTCVANNAAGEDTHTITLIVHMLPAFTELPGDIALT
KGEQLRLTCKATGVPVPKITWTFNNNIIPAQYDDVNGQSELVIERVSKEDSGTYVCTAEN
TVGSIKAIGFVYVKEPPVFKGDYHSSRIEPLGGNAMLNCEVRGDPPPTIQWSKKGVGVPT
SNRIRQLHNGSLAIYGTVNEDAGDYKCVATNDAGVVERSLTLTLQSPPVITVEPVETVIE
AGATAMLNCQANGEPPPAIGWSRQGHPVVSDERVTVLSNGSLQIVAARKEDTSEYECVAR
NLMGSVLVRVPLTVQVHGGFSNWLEWRACSVTCGQGMQERVRQCNNPLPANGGRRCEGPX
APPCHNKPCPVDGSWSEWGLWEECSKSCGQGNRTRTRTCSNPPAQHGGKPCDGSAVDSVM
CNIRPCPIDGEWSSWLPWGPCSETCGKGTQTRLRLCNNPPPSHDGSYCEGSDAQMQVCNK
RRCPVDGKWAPWSSWSACTVSCGGGSRQRMRHCSDPAPQFGGHKCEGSDMQTDFCNSDPC
PIHGNWSPWSSWGTCSRTCNGGQVRRYRTCDNPHPASGGRACAGADMQIQRCGTELCPVD
GNWGQWQTWSQCSASCGGGEQTRIRLCSSPAPLNRGRPCPGDSSQISRCNTQACPGGPSH
AKGSIIGNINNIEFGIAFLNATVTDSPDSESRIIQAKITNVPRSIGPAMRKLVSILSPVY
WTTAKEIGEAMNGFTLTDAIFKRETQVEFATGEILRMTHIARGLDSDGALLLDVVVSGHV
LQLQSVADVNVKDYTEDYIQTGPGQLYAHSTRLFTADGVSVPYTWNHTITYDHTKGKMPF
LVETLHASSVVTEYNPLEETVAFKIQASIAKGDRSNQCPAGFGLDWTGPYCSDEDECTVR
NPCSHTCHNTMGSYYCSCPQGLTISAGGRTCQDIDECALGGHSCHAGQDCENTIGSYRCV
VRCGNGFRRTADGFSCQDVNECQESNPCHQRCFNTLGSFHCGCDPGYQLKGRKCIDVNEC
RQNVCRPDQLCKNTRGGYKCIDLCPNGMTKAENGTCIDVDECQDGTHQCRYNQICENTRG
SYRCVCPRGYRSQGVGRPCVDINECEQVPKPCAFQCTNTPGSFTCICPPGQYLLGDGKSC
AGLERLPNYGAYYSSYNYAQFSPVRDNYQQQQYYRHSSNLYSSFSEYRNSRIPFSRTRRN
IRETCPEGYEARNDRCVDLDECETRDTCQHECRNTLGSYQCACPTGYRLMPNGKTCQDID
ECLEQNINCGSNQMCFNMRGSYQCIDTPCPPNYQREPLSGFCLKSCPANDLECDLSTYAL
EYKLLSLPFGIAAGQDLIRLVAYTHDQVVHPRTTFLMADEDPAIPFALRDENLKGVVFTT
RALREPKTYRMGVRALSYSISGNIEYQTTFIVYIAVSAYPY
NT seq
8766 nt
NT seq
+upstream
nt +downstream
nt
ccgcttaaaccagatgatcgtgtcatgatccaggctagtggccgtatgctgcagattaag
gaggctcaggtatcagatactggtcgttacacttgtctggcatccaacattgctggagag
gatgaaatggaatttgatgtaaatatacaagttcctcctagtttccaaaagccttataag
gaatgggaaactggtaacacagtggatgcaggaagaggtggagaaagtaaagatgtgatt
gtcaacaatcccctctcactgtactgtgagaccaatgctgttcctcctccagttcttaca
tggtataaagacggctttcctctgagctctagcgataaagtactaatattaccaggaggc
cgagtgttgcagattccacgggcacaggctgaagacgctgggagatacatgtgtgtggca
gtcaacgaagctggggaggattccattcattatgatgtccgcgtgctcttgcccccagcc
atcagtggagctgatggtgatcgccctgaagaggtgacggtgcttgtgaacaaggctgca
gcgatggactgcattgcaagtggaagcccttcgccaagtattacctggcagaaggatggc
cacctgctagcagaagatgacaaacacacctttttgtccagtggaaggaggttacagatt
ttgaattcccaaataacggataccggcaggtatgtctgcattgtggaaaacatagcgggc
agcgccaagaagtattttaacttaaacgttcatgttcctccaagtgtgattggtactaat
gctgagaatttgactgtagtggtgaataatttcatctctctgacttgtgaggtcactggc
tttccacctcctgatctcagctggctcaagaacggaaaacctatcagttcaaataccaac
acttttattgtgcctggtgctcgtactctgcagattccccgagccaagctactagatggt
ggtgaatatatttgtattgccagaaaccaagccggggaaagtcagaagaggagtttcctg
actgtccttgtgcccccaagcatcaaagaccatggtggaacctccctgacagcactgaac
gtgagagtgggcgccccggtggtgttggagtgtgaatccaacgctatcccaccaccagtc
atcacctggtacaagaacaggcgcatcatttcagagtctgcgaatgtggagatcctggca
gatgggcagatgttacgaatcaagagcgcagaggtttctgacacgggccaatatgtgtgc
aaagccataaatattgcagggcgagatgataaaaatttccatcttaatgtttatgtgcca
ccaaacatagaaggccctgaacaagagttggtcaatgaaactatcagtaatcccattacc
ttcgtgtgtgatgctactggaattcctccaccaacattaatgtggcttaagaatggaaaa
ccgatagaaaactccgattctcttgaagttcatgttttatctggtggaagcaagcttcag
attgctcgctctcagcttccagacagtgggacctacacatgtgttgcctcaaacatagaa
ggaaaagctcagaaaagttatgtgctttctatccaagttcctcctgatattgttggctct
gaaatgcccagtgaggtcagcgtcctcctgggagaaagcatccagctggtctgcaatgcc
aatggagtgcccacacctgttgtgcaatggcataaagatggaaaaacagttgccagtgat
gatttgcaaagaacaagagtcactccagatggcagcacgttaaacattttcagagcgctc
agttctgatacaggaaaatacacttgtgtggctactaatcctgcaggagaggaagaccga
attttcaacctgaatgtatatgttcctccaacaatagccaataataaagatgaaccagaa
gacctcactgcccttttggacacctccctaaatgttgaatgtactgctaccggaacccca
ccacctcagataaactggctaaagaatggcctgcctctgtctgtctcctcccaaatcagg
ttgctgtcagctgggcaaattctcagagttgcccgagtgcaaatatctgataccggtgtg
tacacttgtgtagcgtctaacagggcaggggtggataacaagcattacaaccttcacgtt
tttgtcccgccaagcttggataacgcaggaggaacagaggatgtgactgtagtaaaaggc
aattcggcttcaatggagtgtcttagtgacggcacgcctgcccccacaatgtcctggttc
aaaaatgggcagcctgtcagccttggagctcacctcacgtcaagtaaccagggaatggtc
cttcattttgtaaaagcagagattggtgacacaggcaaatacacctgtgtagcatccaat
gcagctggggatagcagcaagcacttctccctaaaagtgctggagccgcctcacatcaat
gggtcagatgaaccagaagagctctccgtcatcgtcaacaaccctctcgaacttctctgc
atctcttctggcattccagtccccaaaatctcatggatgaaggatgggcgcccacttctg
cagaatgacaatgttcatgtgctaagagaagtccttcagataaccagtgctcaggtggag
gacacaggacgatacacgtgtttggcatctagcccagcaggagatgacgataaggaatat
ttagtaagagtgcatgttcctcctaacattgctggtaccagtggcccacaggacctcacc
gtgttgcagaacagacaagttatactggaatgcaagtcagatgctgtgccacctccaaca
atctcgtggcttaaaaatggagaacttttcgagggaactcctcgtgtccgaatcctctcc
agtgggcgctacctgcagatcaataacgctgagctcagcgatacagcaagctatacatgt
gtggcgagtaatatcgcaggaaaaatgaccagggagttcgtgctgacagtgcatgtggct
cctacgatccgaagcagttctccaaccgctgcggtgcatgtaaatgcttctgcagttctg
gagtgtgttgcggaaggagtaccgagcccaagagttacgtggaggaaggatggggctgtt
ttcactggaaacaatacgagatattccatgttagaggatggatctctgcacatccactca
gcacaagttactgacacggggagatacgtgtgtatggcaaccaatccagctggcactgag
cgcagacgaattgatcttcaggttcttgttcctccaactattgctcctggacatacaaat
attacagttactgtaaatgtgcagaccactttgccttgtgaaaccactggaattcccaga
ccaacaattagctggaaaaagaatgggcatctgcttagcgttgaccagaatcagaatatg
tatagacttctgtcttcgggttccttagtaatcatttctcccactgtggatgacactgct
gtctatgagtgctctgtgtcgaatgatgcaggagaagatcgaagagcagttgagctcact
gttcaagtgcctccatccatagcagatgaagccacagaccttttggtaacaaagctgtct
ccagtcgtaattccctgcaccaccacaggggttcctgtcccctcggttcattggaccaaa
aacggcgtaaagttgcttcccagaggagagggctacaggattctctcttcaggggctgtt
gaaataccggctgctcagctcgcgcatacaggacgctacacctgcgtggcccggaacaca
gctggctcagcttacagacatgccacccttcacgttcaggaaccaccagttatccaaact
caggcaggggtgctggatgtcattgtgaacaatcccgttctactcccgtgtgaagcgacg
ggcacaccccgacccataataacatggcaaaaggagggcatcaacgtcatcacaacaggc
aacagctatatggtccttccaagtggcagtttgcagattgcaaaatcagctgttgaagat
gctggcacatacatgtgtgttgctcagaatccagctggcactgccctgggcaagatcaaa
ctgaaagttcaagttcctcctgttatcaagtcccacctcaaggaatatgttgttcctgtc
gatcaatctgtcactctgcagtgtgaggctgaaggctaccctgggccggagatcagctgg
cacaaagacggacagccgataaccgagtccatgagcaaacgaattcttagcaccggagcg
ctgcagatcgtgtttgtgcagcccagcgatgccggccgttacacgtgtgtagcggcaaac
ctggcagggtccagcacatccagcgcagagcttgctgtgcacattccacccaagattcgc
agttcggatacacagtacacggtcacggaggactcccaggctgtcctgtcctgtgtggct
gagggaattccaccaccgacaataaactggaagaagaacaatatgctgttaacagagaaa
gtaggaaaataccggtctctgccagatggagacctcattttggacaacgttgctcccgat
gatgctggcagttacacctgtgttgctaacaacgctgctggagaagacacacacaccatc
accctgatagttcacatgcttccagcttttactgagctgcctggagatatcgctttgact
aaaggggaacagctcagattaacttgcaaagcaactggggtacccgtacccaaaataaca
tggacctttaacaataacatcattccagcacagtacgatgatgtaaatggacagagcgaa
cttgttatcgaaagggtatctaaagaggactccggcacctatgtgtgcacagcagaaaac
acggttggctcaatcaaagctattggctttgtgtatgtcaaagagcctccagtcttcaaa
ggcgattaccactccagccgcattgagcccttgggtggcaacgctatgttgaattgcgaa
gtcagaggagatccacctccaaccatccagtggagcaaaaaaggagttggcgttccaact
agcaacaggatccgacagcttcacaacggttctcttgcgatctacggcactgtaaatgaa
gatgctggtgactacaagtgcgtggccaccaatgatgctggtgtggtggaacgcagcctg
acgctaacacttcagagtcctccggtcattactgttgaacctgtagagacagttatcgaa
gctggtgccacagcaatgctgaactgccaggccaacggagagcctcctccagccattgga
tggtcccgccaaggtcacccagttgtgagcgatgagagggtgactgtcctctctaacggc
tccttgcagattgttgcagcgcggaaggaagatacatctgagtatgagtgtgttgcgagg
aatctaatgggatctgttcttgttagagtaccgctgactgtccaggtgcatggtggattt
tctaactggctggaatggcgagcctgcagcgtaacttgtggccaggggatgcaggagcga
gtccgtcagtgcaacaaccctctcccagcaaacggggggaggaggtgtgaggggccannt
gcccccccctgccacaacaaaccatgcccagtggacggcagctggtcggagtgggggctg
tgggaagagtgttcaaaaagctgtggacaaggcaacaggaccagaaccagaacatgcagt
aaccccccggcccagcatggtgggaagccctgcgatggcagtgccgtggactcggtcatg
tgtaacatcaggccttgccccattgatggtgagtggagttcttggctgccttggggtccc
tgcagtgagacgtgcgggaagggcactcagacacggctgaggctctgcaataaccctcct
ccttcccacgacgggtcctactgtgaaggctccgatgcacagatgcaagtttgcaacaag
agacgctgccccgtggacggcaagtgggccccgtggagcagctggagcgcctgcaccgtg
tcctgtggaggaggcagcaggcagagaatgcgccactgctccgacccagccccgcagttt
gggggtcacaaatgcgaaggaagtgacatgcaaactgatttttgcaacagcgatccttgt
cccattcatggcaactggagcccgtggagtagttggggaacttgtagccgaacgtgcaac
ggaggccaggtgaggcgataccggacgtgtgacaatcctcaccctgccagcggtggaagg
gcatgtgcaggagctgacatgcagatccagagatgcggcacagaactgtgccctgtggat
gggaactgggggcagtggcaaacatggagccagtgctctgcttcttgtggaggaggagag
cagacccggatacgcctgtgcagcagtccagccccgttaaatcgtgggcgtccctgtcct
ggagactcctcccagatatccaggtgtaacacccaagcatgtcctggtgggccttcacat
gccaaaggcagcatcattggaaatattaacaatattgaatttgggattgctttcctgaat
gccacagtcacagacagccctgactctgaaagtagaataatacaagccaagattacgaac
gtacctcggagcattggtccagcgatgagaaagcttgtttctatactcagcccagtttat
tggacaactgcaaaagaaattggagaagcaatgaacgggtttacgctcactgatgccatc
ttcaagagagaaactcaagtggagtttgcgactggtgagattctgcgaatgactcacatt
gcccggggcctggattctgacggagccttgctgctggatgtcgtcgtgagcggtcacgtg
ctgcagctccagtctgtagctgatgtcaatgtgaaggattacacggaagactacatccag
acaggccccgggcagctgtacgcccattccactcgtctcttcaccgcagatggagtgagc
gtcccctacacatggaaccacaccatcacctatgaccacactaaagggaagatgcctttc
ttggtggaaaccctccatgcttcctctgttgtgacggagtacaacccgctggaagaaacc
gtggcttttaaaatccaggcgtccattgcaaaaggggatcgtagcaaccagtgccctgct
gggtttggtttggactggacggggccttactgttcagatgaagatgagtgcactgtgcgg
aatccttgttcccacacctgtcataacaccatgggatcttactactgctcttgtccgcaa
ggcctcaccatctctgcgggtggaagaacatgtcaggatatcgacgagtgtgcattaggt
gggcacagctgccacgctggtcaggactgcgagaacaccatcggctcgtaccgctgcgtg
gttcgctgtgggaatggcttcaggaggacagctgatggatttagctgccaagatgttaat
gagtgtcaggagtccaacccctgtcaccagcgttgcttcaacactttaggaagcttccac
tgtggttgtgatccaggataccagctaaagggcagaaaatgcatcgatgtaaatgagtgc
aggcagaacgtatgcaggcctgatcaactttgcaaaaacacccgtggtggttataagtgc
atcgatctgtgtcccaatggaatgaccaaagctgaaaatggaacatgcattgatgttgat
gaatgccaggatggaacccaccagtgccgctataaccagatttgtgagaacacacgagga
agttaccgctgtgtgtgtccacgaggatatcggtcccagggagttggaagaccttgtgtg
gacattaatgaatgtgaacaagtgcctaaaccctgtgcatttcaatgcaccaacaccccc
ggcagcttcacgtgtatctgtccacctggacaatacttattaggtgatgggaaatcttgc
gctggattggagagattgccaaattatggcgcctattacagtagctataactatgctcaa
ttctcccctgtgagagacaactatcaacagcaacagtattacaggcactcctcaaatctc
tacagctccttctcagagtatagaaacagcagaatacctttctccaggactagaaggaac
attagagaaacttgtcctgaaggctatgaggcaagaaatgacagatgtgtagatcttgat
gaatgtgaaaccagagatacctgccagcacgagtgcaggaacacgctgggcagttaccag
tgtgcttgtccgaccggctatcgccttatgcccaacggcaaaacctgtcaagatattgat
gagtgcctggagcagaacattaactgtggatcaaatcagatgtgtttcaacatgagagga
agctaccagtgcatagacacaccctgtccaccaaattaccagcgggagcctctttctggg
ttctgcctcaaaagctgcccggccaatgacctggagtgtgacctgagtacctacgccctg
gaatacaagctcctttccctccccttcggcatagcagccggtcaggatttaatccgcctg
gtcgcctacactcacgatcaagtcgtgcacccaaggacgactttcctaatggcagatgag
gacccggccatcccatttgccctgagagatgagaacttgaaaggagttgtgttcaccacg
cgagcgctgcgggagcccaagacgtaccgcatgggagtcagagccttatcctacagcatc
agtggaaatatcgagtatcagacaactttcattgtttatatagccgtgtcggcctacccc
tattaa
DBGET
integrated database retrieval system
