Apaloderma vittatum (bar-tailed trogon): 104270446
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Entry
104270446 CDS
T08559
Symbol
TPCN2
Name
(RefSeq) two pore calcium channel protein 2
KO
K14077
two pore calcium channel protein 2
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04020
Calcium signaling pathway
avit04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
104270446 (TPCN2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
104270446 (TPCN2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
avit04040
]
104270446 (TPCN2)
Ion channels [BR:
avit04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
104270446 (TPCN2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF1331
Motif
Other DBs
NCBI-GeneID:
104270446
NCBI-ProteinID:
XP_009863130
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
TGTDNDLYINQAIVFIEDAIQYRSINHRVDSKSLWLYRWYYSRTCQWILSLTITIILALA
FIEKPSSLTITSDVRYRLPAWNPPCGLTESIELLCFLVFMADVSVKSYLIGWEEFWKNKW
LMAYILTLIVSLADWIVSLSFFCMEKVRIRRILRPFFLLQNSSMMKKTLKSINSTLPEMA
SVVLLLAVHLSLFTMFAMLLFARTKDGQQDKEWVVYFRNLPESLTSLLVLLTTANNPDVM
IPAYSKNRAYSIFFILFTVLGNLFLMNLLTAIIYNQFRGYLLKSVQSSLFRRRLGIRAAF
EVLSSLKETPANAEQSYVGTGALRQVLQKVEMDSRCKQAIMRSLRMYSCDQLSAAQFQKL
FEELDKDAIKQHPPSPEYRSHFMQKMQFAFGHPYFGYLGNVVALANIISICVVLVLDADK
QPSERDDFFLGAINCFFILYYLLELLLKILAMGLKRYLSYPSNRFDGLLTIILLVLEIAT
FSVYGFPHPGWRPEFMGLLSLWDMVRLVNMLIVFRFLRIIPNMKFMALVVTTLLDLVKNL
RAFAGILVVVFYAFAITGIMLFEGAVNPLGNASAVNTSYENGTLQCGTYEQLEYWPNNFD
DFAAAVVTLWDVMVVNNWQVFLEAFSRYSSPWAKIYFVAWWLISSVIWVNLFVALLLENF
IHKWDRRCHREPLSDIEYQRTVELMFRDVLEEPTEEELLEKLHQHPHLHLCR
NT seq
2141 nt
NT seq
+upstream
nt +downstream
nt
gtacgggaactgataatgacctttatataaaccaagccatagtatttattgaagatgcaa
tacagtatcgatctataaatcaccgtgtggactccaaatccctgtggctttatcgatggt
attattcaagaacttgccagtggattttgagtttaaccattactataatcctggctttgg
ctttcattgaaaagccttcttcgcttactatcacgtcggatgtacggtaccgccttcccg
cgtggaatcctccgtgtggcctaacagaaagcatcgagctgctttgctttctggtgttca
tggctgatgtatccgtgaagagttatttaattggatgggaagaattttggaaaaataaat
ggctaatggcttatatactgacattaattgtttcccttgctgattggattgtatcactga
gttttttctgcatggagaaagtgagaataagaagaattcttcgtcctttctttctccttc
agaattcttctatgatgaagaaaacattaaaaagtatcaacagcacattgcctgaaatgg
caagtgttgttctactactagctgttcatctgtctctctttaccatgtttgccatgctgc
tgtttgctcgaacaaaggatggccagcaggataaggagtgggtggtgtatttccggaatt
tgccagagtcactgacatctctgctggtcctgctaactactgcaaataatcctgatgtga
tgattcctgcgtattctaagaatcgagcatattcaatcttcttcatactcttcactgtat
taggcaatttgtttctgatgaacttgcttacagcaataatatacaaccagtttcgaggat
accttctgaaatcagttcagtcctccctcttcaggaggcgactaggaatccgggccgcgt
ttgaagtgctctcttccctgaaagagactcctgctaatgcagaacagtcatatgtgggca
ctggggccttaagacaagtgctgcagaaagttgaaatggattctcgctgcaaacaagcca
taatgagatctctcagaatgtactcctgtgaccagctgtcagctgcccagtttcagaagc
tctttgaagaactagacaaagatgccattaagcaacatcctcccagtccggagtaccggt
cccactttatgcagaaaatgcagtttgcttttggccatccctactttggctacttgggga
atgttgtagcccttgcaaacattatttctatctgtgtggttttggtactggatgcagata
agcagccatctgaaagagatgacttcttcctgggggctatcaactgcttcttcatcctat
actatctgctggaattgttgctgaagatcttagcaatgggtttgaaaagatacttgtcct
acccaagcaatagatttgatggacttctgactatcattttgctggttttggagattgcaa
ctttctctgtgtacggatttcctcatcctggttggcgacccgagttcatgggcttattat
ccctgtgggatatggtgcgattggtgaacatgttaattgtgttcaggttcctgcggatta
ttcctaatatgaagttcatggctttggttgtcactacattgctggacctggtaaaaaact
tgagagcctttgcaggaatccttgtggtggttttctatgcatttgctataactggcatta
tgctatttgaaggtgctgttaatcccttgggaaatgccagtgccgtcaatacatcctatg
agaatggcactctgcagtgcgggacctacgagcagctggaatattggccaaacaacttcg
atgactttgctgcagcagtggtgaccctctgggatgtgatggtggtgaacaactggcaag
tctttttggaagcattttcaagatattcaagtccatgggcaaagatatattttgtagcct
ggtggttgatctcctctgtcatctgggttaatctcttcgtagctttacttctagagaact
ttattcacaagtgggaccgtcgctgtcatcgagagcctctctcggatatcgagtaccaga
ggacagttgaactaatgttcagagatgttttggaagaacctacagaggaagagttgttgg
aaaagctgcaccagcatccacacctgcatttatgcaggtga
DBGET
integrated database retrieval system
