Apaloderma vittatum (bar-tailed trogon): 104270520
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Entry
104270520 CDS
T08559
Symbol
LAMB4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04510
Focal adhesion
avit04512
ECM-receptor interaction
avit04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104270520 (LAMB4)
04518 Integrin signaling
104270520 (LAMB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104270520 (LAMB4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB4
LAMB1
Rod_CreS
DUF8003
Motif
Other DBs
NCBI-GeneID:
104270520
NCBI-ProteinID:
XP_009863212
LinkDB
All DBs
Position
Unknown
AA seq
1786 aa
AA seq
DB search
MAMPQQPQQMEQQRGTLPPLVPTDGERVLIRLQRAQDDCNAGSCHPAVGDLLLGRSKQLT
ASSTCGMNSPQKYCIVGYLEAEQKCFLCDSRYPYNPYTQHNSHLVENVITAFEPDRKKKW
WQSENGIDHVSIRLDLEALFQFSHLILTFKTFRPAAMLVERSTDFGQTWKVFRYFAQDCA
ASFPNISSGPARSVGEVICDSRYSDIEPSTEGEVVLKALDPSFDIENPHVPYIQELITMT
NLRINFTKLHTLGDALLGRRHSDPLEKYYYAVYEMVVRGSCFCHGHASQCDPMQNLRGDV
FHQSGMVHGRCICHHNTEGLSCERCKDFYHDAPWRPAEGARDNACKRCNCNGHSGRCHFD
LAVYRASGGVSGGVCEDCQDNTMGQHCDQCKHFFYRDPLKVISDPQACLPCSCDPEGTLH
NGVCESHTDPALGTVAGRCPCKENVEGIRCDKCRANYYGLRGSDPLGCQPCNCDPTGSLP
FSFCDPATGQCLCQRFTTGRRCEKCVVGYWGLGNSLYGCSPCDCDIGGSQNNLCSPRDGQ
CKCLPNIVSRQCNEPAPGYFFLPLDYYIYEAEHAKPLSGSAPLGAMQFGQDSAVEVVFRQ
PSAGRSVTWTGPGFARVPSGAGLRFAINNVPFAMDFDIAIRYEPESLEDWLGSVTVQPTG
VLSSQHCRNKDLSQEPHVLPLPATKRIALLQTPACLEPGTEYSVDVYFSQPSASDPKVKS
FILIDSLGLIPRIDSMENFCSEKDLDEYQKYHCIEIASEVGPHILPEVCARLIASMSARI
HNGAVACKCNPQGSLNASCSKLGGQCQCKANVVGRCCDTCSAGSYGFGFHGWLCSSCFPA
CECHPQGSLSTLCDQVTGQCSCRREVDGQRCSRCLPGYFGFPHCRPCPCNGYAELCDPVT
GVCLNCHGFTAGSHCERCMDGYYGNPLNRERCRPCMCPGAPTSNKYFAHSCYQDSQSAQL
VCNCLEGFSGNQCDECPSGFYKIPGSPGLDCTPCPCNNNINVTDPESCNRATGECTKCLH
NTHGANCQFCKPGYFGSALDQNCRRCTCNPAGVHPAVCPEGDAACLCDPTTGACPCLPNV
VGTACDQCASGYWDLASGKGCQTCACDPKNSQSNQCNQLTGQCPCKLGYSGRCCDECEEN
YFGNPQKHCISCECNLEGTSQPKCDKDTGACNCRAGVTGRFCNQCSRGFEKDFPSCHQCH
LCFEQWDTAITALAQTVQGLMRFAANLEDKGGRMPACDMRFKPFEDTISEIERILRHPIL
SLKALSGIKDFQGYVQQEVAQLDPLHSMLYEFPDLDKNIEDIRKEADLVYELLQQKIYLH
QSVHYLNLKEAISNIRKHFEESLVAEQKSSGTTSVVRYSEYTRNHALAMLDHQALKASNV
LEQLKMIKSPNIQNSNEKICGVPGDQPCVTAACGGALCQDKDGLRRCGGPNCTGSLPLST
GAFRKAEETAVLLKNLTTKLQEPENQVESMRKMAEDSKLKSSQFYGQLERAKNQIEVNGE
ITKELIQKVKVFLSDESAPPEDIEKVANHVLQINLPLTPQELMGILGKIRNIMNHCEKYK
LNANKRNRKREAARLLLVEAQEANKAAKALLPVGEINNELKNVVKSQRHSKNTFMKLNEE
VRGIRTQISQAENQVNKTNDTLNDLSAKQSEMEDEIATLQAKMLMNKNQATKTRAGAEAA
HKRAQNIENEFADIKRKYTILQEKLEAQRPQKVTLEKVKQLKEEAEKLAEETEKKIKRIT
DLEKKLQDLNQTKQDKAEQLKQLEEQVIAIKNEIMEQESKYATCKS
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgccccagcagccccagcagatggagcagcaacggggtacactacccccactg
gtgcctacagatggagaaagagtgctgataaggctccagcgtgcacaggatgactgtaac
gccgggtcctgccacccggctgttggggacttactcctgggtcgcagcaagcaattaacg
gcctcatcaacctgtggaatgaacagccctcagaagtactgcattgtaggctacctagag
gcggaacagaagtgctttctctgtgattccagatacccatataatccctatacacagcac
aacagtcacctggttgaaaatgttatcacagcttttgagcctgacaggaaaaagaagtgg
tggcagtcagaaaatggcattgaccacgtcagcattagattggacctagaagctttattc
cagttcagccatctcatcctgacttttaagacatttcggcctgcagcaatgctggttgag
cgctccactgactttggtcagacctggaaagtatttaggtattttgcacaggactgtgca
gcttcttttcccaacatctcttctggtccagcaagaagtgtgggagaagtcatttgtgat
tcaagatattcagacatcgagccctccactgaaggcgaggttgttttaaaagctttggat
ccgagctttgacatagaaaatccgcatgtgccatatatccaagagctcatcacaatgaca
aacctaaggatcaattttacgaaactccacacccttggggatgctctgcttggacgaagg
cacagtgatcccctggagaagtactactatgctgtctatgagatggttgtgcggggcagc
tgcttttgccatggccatgccagccagtgtgaccccatgcagaatctgcggggagatgtg
ttccatcaatctgggatggtccatgggagatgtatctgccatcataacactgaaggtttg
tcttgtgaaagatgtaaagatttctaccatgacgctccctggaggccggctgaaggggca
cgagataatgcttgcaaacggtgtaactgcaacggccactctggcaggtgccactttgac
ctggccgtgtaccgagccagtggtggcgtcagtggtggcgtttgtgaggactgtcaggac
aacaccatggggcaacactgtgaccagtgcaaacatttcttttaccgggatccgctcaaa
gtcatctcagaccctcaggcatgcctcccctgcagctgtgacccagaaggtacattgcac
aacggcgtgtgtgagagccacacagatcctgctctgggaacagtcgcaggacgatgccct
tgcaaggagaacgtggaagggatccgctgtgacaagtgcagggcaaactactatgggctg
cgtggcagtgaccccctgggctgccagccctgcaactgtgatcccactggcagtttgccc
ttctccttctgtgaccctgccacgggacaatgcctctgccagcggttcaccacaggccga
cgctgtgaaaaatgtgttgtaggatactggggtcttggcaacagcttgtacggctgttct
ccatgtgactgtgatattggtggatcccagaataacttgtgctcaccgagggacggtcag
tgcaagtgtcttcccaacattgtgagccgccagtgtaatgagccagccccaggatacttc
tttttacccctggattattatatttatgaagccgagcatgcaaagcccctttctggctct
gcacccttgggtgcgatgcagtttggacaggactcagctgtggaggtggttttcaggcag
cccagcgccggtcggtcggtaacgtggacaggacccggctttgcccgtgttcccagcgga
gctgggctgagatttgccatcaacaacgttccctttgctatggactttgatatcgcaatt
cgctatgagcctgagtccttggaagactggctaggaagcgttactgtccagcccactggt
gttttgtcaagtcaacactgcagaaacaaagacctttcacaggagccacatgtgctgcct
ctcccagctacaaagaggattgcacttctgcaaactccagcctgcctggagccgggaaca
gaatattctgtggatgtgtatttttctcagccctctgcctctgacccaaaggtgaaatca
ttcatcttgattgactcacttggacttattcccagaatagactccatggagaacttttgc
agtgaaaaggatttagatgagtaccagaagtatcactgcattgaaattgcatcagaagtt
ggacctcatatcctgcctgaagtgtgtgcacgtctcatagcgagcatgtcagcccgcatc
cacaacggtgctgtcgcatgcaagtgcaatccccaggggtcactgaatgccagctgcagt
aaactggggggccagtgtcagtgcaaagccaatgtcgtgggacgctgctgtgacacctgc
tctgcaggcagctacggcttcggttttcacggctggctttgctcttcgtgttttccagca
tgtgagtgccacccacaaggttctctgagcacgctctgtgaccaagtgacggggcagtgc
tcctgccgccgggaggtggatggtcagcgctgcagccgatgtctgcctgggtattttgga
tttccccactgccgtccttgcccgtgtaatggctatgcagagctttgtgacccagtgact
ggagtgtgcctgaactgccatgggtttacagctggaagccactgtgaaaggtgcatggat
ggctattacggaaaccctctgaacagagaacgctgtcgcccgtgcatgtgccccggggca
cctacaagcaataagtattttgcacattcctgttaccaggattcccagtctgcacagcta
gtctgcaattgtcttgagggattttcaggcaatcagtgtgatgagtgtccgagcgggttc
tacaaaatcccaggcagccccgggcttgactgtacaccgtgcccctgcaataacaacatc
aatgtgacagacccagagtcctgtaacagggccactggggagtgcaccaagtgtttacac
aacacccatggagccaactgccagttctgcaaaccggggtattttggctcagctctagat
caaaactgtcgaaggtgcacatgcaacccagcgggcgttcaccctgccgtgtgcccagag
ggggatgcagcctgtctgtgtgacccaaccacaggagcttgcccttgcctgcccaatgtg
gtgggcacagcatgtgaccagtgtgcctctggctactgggatctggctagtggaaaagga
tgtcagacctgtgcctgtgacccaaagaactcccaaagcaaccagtgtaaccagcttaca
ggccagtgtccatgtaagctaggttacagcgggagatgttgcgatgaatgtgaggaaaac
tactttggcaatccccagaagcactgcatctcatgtgagtgtaacctggagggaaccagc
cagcccaagtgtgacaaagacaccggcgcgtgtaactgccgcgctggcgtcaccggccgg
ttctgcaaccagtgcagccgtggctttgagaaagactttccctcttgccatcagtgtcat
ctttgttttgagcagtgggacactgcaattactgcccttgctcagactgttcaagggtta
atgaggtttgctgcaaatctcgaagataaaggaggacgaatgcctgcctgtgacatgcgc
ttcaaaccctttgaagataccatttctgaaattgaaagaattttgaggcatcctattctt
tcactgaaggccctctcaggcatcaaggattttcagggctatgttcaacaagaagttgca
caattggatccccttcacagtatgctgtatgagtttcccgaccttgacaagaacatagaa
gacatcaggaaagaagctgacctagtgtatgaacttctacaacagaaaatatatctacat
caaagtgttcattacttgaatctcaaagaggccatcagcaacattaggaaacactttgaa
gaatcattggtggcagaacagaagtccagtggcacaacttctgttgtaagatactcagag
tacaccaggaaccacgcgcttgcaatgctggaccatcaggccttgaaagcaagcaatgtg
ctggaacagctcaagatgatcaagagccccaacatccaaaactcgaatgaaaagatctgt
ggtgtgccaggagaccagccctgtgtcacagcagcctgtggaggagctttgtgccaggac
aaagatggactcaggaggtgcggtggcccaaactgcactggatctcttcctctctccact
ggtgccttcaggaaagctgaggagactgctgtgttgctaaagaatttgactactaagcta
caggaacctgagaatcaggttgaaagcatgagaaaaatggcagaagacagcaagttgaaa
agctcgcaattttatggacaactggagagggctaagaatcaaattgaagttaatggagag
atcactaaggagctcattcaaaaagtgaaagtcttcttgtcagatgagagtgcacctcca
gaagacatcgaaaaggtggcaaaccatgttctgcaaataaaccttcccctgactccacaa
gagctcatgggcatacttggcaaaatcaggaatattatgaaccactgtgagaagtacaaa
ctcaacgcaaataagagaaacagaaaaagggaggcagctcggttactgctggtggaggct
caagaagccaacaaagcagctaaagctcttctgcctgtgggtgaaattaataatgaacta
aaaaatgttgtgaagtcccaaagacactccaagaacaccttcatgaagttaaatgaagag
gtacgaggcatcagaacacaaatctcacaggctgagaaccaagtgaacaagacaaatgac
acactaaatgacttgtcagcaaaacagtctgaaatggaagatgaaatagccacattacag
gcaaaaatgctgatgaacaagaatcaagctacaaagacaagagctggggcagaagcagca
cacaagcgagcccaaaatattgaaaatgaatttgctgacattaaaagaaagtacacaatt
cttcaagaaaagctagaagcccaacgacctcaaaaagtaacactagaaaaagtgaagcag
ctgaaagaagaagcagaaaaactggctgaagagactgaaaaaaaaattaaaagaataaca
gatttggagaagaagcttcaggatctgaatcaaaccaaacaagacaaggcagagcaactg
aaacaactagaggaacaagtgatagccattaaaaatgaaattatggagcaggaaagtaaa
tatgcaacctgcaaaagttag
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integrated database retrieval system