Apaloderma vittatum (bar-tailed trogon): 104270580
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Entry
104270580 CDS
T08559
Symbol
RAD54L
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104270580 (RAD54L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avit03400
]
104270580 (RAD54L)
DNA repair and recombination proteins [BR:
avit03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104270580 (RAD54L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
104270580
NCBI-ProteinID:
XP_009863289
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
TRKRQKPVSETESGECYRSPFRKPLAQLTNRPHCLDSSQHEAFIRSILSKPFKVPIPNYK
GPLGLRALGIKRAGLRSPLHDPFEEGALVLYEPPLLSAHDQLKIDKDKAPVHVVVDPVLS
RVLRPHQREGVKFLWDCVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPDCKPE
IEKAMVVSPSSLVRNWYNEVEKWLGGRIQPLAIDGGSKEEIDRKLVGFMNQRGLRVPSPI
LIISYETFRLHAEALQKGSVGLVICDEGHRLKNSENQTYQALNSLNTPRRVLISGTPIQN
DLLEYFSLVHFVNSGILGTAQEFKRHFEIPILKGRDADASEAERHKGEERLKELISIVNR
CLIRRTSDILSKYLPVKIEQVVCCRLTPLQAELYKNFLKQAKPVEELKEGKISVSSLSSI
TSLKKLCNHPALIHDKCVEEEEGFMGALDLFPAGYSTKSVEPQLSGKMLVLDYILAVTKS
TSNDKVVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMSIKKRAKIVERFNSPSSPEFIFM
LSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEK
IFQRQTHKKALSSCVVDEEQDVERHFSLGELKELFTLNETTTSDTHDKIKCRRCVNGHQV
RPPPQGSDCTSDLSQWNHCADKRGLQDSVLKAAWDAAVTFTFHHHSHEEQRGIP
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
actcggaagagacagaagcctgtcagtgagacagagagtggagaatgttacaggtcacct
ttccggaaacccctggctcagttgaccaatagacctcactgcctggatagcagtcaacat
gaggcttttatccgcagcattttgtccaaacccttcaaagttcccattccaaattataaa
gggccactgggcttgcgtgcactgggtatcaaacgggcagggctgaggagtcctctccat
gacccttttgaggaaggagctctggttctgtacgagcccccgctgctgagtgcccacgac
cagctgaaaatagacaaggacaaagcacctgtccatgttgtggtggatcctgtcctcagc
cgtgttttacggccccatcagagagaaggagtgaaattcctctgggactgtgtgacgagt
cgacggatccccgggagtcatggctgtatcatggcagatgaaatggggctgggtaaaacc
ctgcagtgcatcacgctcatgtggacgctcctccggcaaagtccggactgcaagcctgaa
attgagaaagccatggtggtgtctccctccagcctggtgagaaactggtacaatgaagta
gagaaatggctggggggaaggatccagccactggccattgacggaggctccaaagaagag
attgaccgtaaattagttggctttatgaaccagcgtggcctgcgagtgccttcacccatc
ctgatcatctcctatgagaccttccgactccacgccgaggcgttacagaagggcagtgtg
gggctggtcatatgtgatgagggccacagactgaagaactctgaaaatcaaacatatcag
gctctcaacagcttaaatacgcctcgacgagtcctgatctcaggcactcccattcagaat
gacctgcttgagtatttcagcctggtgcactttgtcaattcaggcatcctagggacggca
caggaatttaaaaggcattttgaaattcccatcttgaaaggcagagatgcagatgcaagt
gaggctgagcgacacaaaggagaagagaggcttaaagagctcatcagcattgtgaacagg
tgtttaatccgaagaacttcagatatcctgtccaaatacctgccggtgaagatcgagcag
gtggtctgctgcagactgacacctctgcaggctgagctgtacaagaacttcctgaagcaa
gccaagccagtggaggagctgaaggaaggaaaaatcagcgtgtcgtctctctcttccatt
acttccttgaagaagctctgcaatcaccctgctcttatccatgataaatgtgtggaggag
gaagaaggttttatgggagcgctggacttgttccctgctggttacagcaccaaatctgtg
gagcctcaactctcaggaaagatgctggttttggactacatccttgctgttacaaaaagc
accagtaacgacaaggtggttttagtgtctaactacactcagacactggacctgtttgaa
aagctctgcaggaatagaaggtatttatatgtccggctggacggcaccatgtccattaaa
aaaagagcaaagattgtggagcgattcaacagcccctcgagcccagagtttatcttcatg
ttaagcagcaaagcaggtggctgtggtttgaatttgatcggtgctaatagactggttatg
tttgaccccgactggaatccagcgaacgatgagcaagccatggctcgggtgtggcgggat
ggccagaagaagacgtgctacatctatcgactgctttcaacgggcaccatagaggagaag
atattccaacgccagactcacaagaaggccctcagcagctgcgtggtggatgaagagcag
gatgtagaaaggcatttctcacttggggagctgaaggagctcttcacattgaatgagacc
accaccagtgacacccatgacaagatcaagtgtcgtcgctgtgtgaatggccaccaggtg
cggccccctcctcaaggatccgactgtacctctgacctctcccagtggaaccactgtgcc
gataagcgggggctgcaggactctgtgctgaaggctgcgtgggatgctgctgtcaccttc
acctttcatcaccactcccatgaggagcagcgagggattccctaa
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integrated database retrieval system
