Apaloderma vittatum (bar-tailed trogon): 104270678
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Entry
104270678 CDS
T08559
Symbol
HPS3
Name
(RefSeq) LOW QUALITY PROTEIN: Hermansky-Pudlak syndrome 3 protein
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
avit04131
]
104270678 (HPS3)
Membrane trafficking [BR:
avit04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
104270678 (HPS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
104270678
NCBI-ProteinID:
XP_009863414
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MNWRCMSAGSSRVCVRMVGHKVEESYSETLKEQMSIVEMPLSDPPLCISCCPVNGDLLVG
CKNKLVMFRLKYLVINENLTMLDFERSLILHIHDLIXVAFCARHVAITTELDVLILKLEP
IQQSADGTEQGAHRVDMVEKPVDRGMKSEGPSPHGLQLELDEFIICQKPVELLGEESKLC
EIPVTLESTELPTEDTKCFQVRYLLFRRFTPDQSPFGFCEETKLHSVQLLPVYQTGSSVT
AHEEAENKRELLSLFCFFSLPHVGYLYSLGKLVELISTYQYSEKSEQAVLTPQFLHVITS
ENLQCFTVRCSAAAARDEDPYIDTTVKACPPVALDICTLRMQLFIGPRAICHFKNHIILL
TKADTEDITERRKPARRMLSRKADGIKSRTNSESEPGWNLYIINTVSTIQLYREMVDYSR
TYENVKTESCIHLLSEAHLLVRAAIMDPRFVKSEEREELMRAFRESCAALGDCYSRCDTK
DYHLALPYYRMSGLSMTDVLKRLVLEGDEMQTYERGFIFYLTHSLNEDLNEELTKESANR
VLRIFYHADPVQLPHILCSPCMRNTCPLTALKYLQKVEHVMPSVVLTLTKAFMALKMGDL
TMYEREMDSYKETVLACGFVGQPKLLIQRKEGIVTPTEFAVHLKEMHPGLLVAATVALHE
NSKIELEEADTFFKALCSNSENAVPQLLVDFWEALLVVCSQEEILQELLLRVTSQYVWRI
LKKERPETKPLKTTEDLINSCNHFGLIFPWVTSIMSAGSPSDKDYREDISRLQSLLCSQS
INIASALPVLEPLAEADGVGLAIHVLCSTRLGKYEEAIDQLLQRCPSAAVAYAQHELKGD
SRAVWWNKLLPELCKRTRLTGNDCPVLISSLRETLSVVAMELELRDFLSLVPEDGTAAFF
LPHLLHCSQRKLLT
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgaactggagatgcatgtctgcagggagttctcgcgtttgtgttcggatggttggtcac
aaggtggaggaatcatacagcgaaaccttaaaagaacagatgtcgattgtggaaatgccg
ctttcagatcctccgctgtgtatttcatgttgtcctgtaaatggagatcttcttgtgggc
tgcaaaaataaactggtcatgttccgtttgaaatacctggtcataaacgagaatttgact
atgttagactttgaacgctccttaattttacacattcatgacctcatttaagttgcattt
tgtgccagacatgtagccataacaacagagctggatgttctgatcctgaaactggaaccg
atccagcaaagcgcggatgggacagagcagggtgcacatagagttgatatggtagaaaag
cctgtggatagaggtatgaaaagtgaaggcccttcaccacatggtttgcagcttgaatta
gatgagttcatcatatgtcagaagccagtggaactgcttggagaagaaagtaaactatgt
gagatccccgtcacgctggaatccacagagttgccgacagaagacacaaagtgcttccaa
gtgcggtatctgcttttcagacgttttacacctgaccagtcgccttttgggttttgtgaa
gagacaaagttgcactctgttcagctgcttcctgtgtaccagacaggaagttccgtgaca
gcccatgaagaagctgagaacaagagagaactactgagtctcttttgctttttctcctta
cctcacgttggatatctctactctcttgggaagttagtagaactgatttctacttatcaa
tattcagagaagtcggagcaggcagttcttactccacaattcctgcacgtcattacaagt
gagaacctgcagtgcttcacagtgcgatgcagtgcagcagcagctcgagatgaggatccg
tatatcgatacgactgtgaaggcctgtccccctgttgcactggatatctgcacattaaga
atgcagctttttataggaccaagagctatctgtcatttcaaaaaccatataattcttttg
actaaggcagacacagaagatattactgaaagaagaaagcctgcaagaaggatgctctcc
agaaaggctgacggcatcaaatccagaacaaattctgagtcagagcctggttggaattta
tatattataaacactgtttcaaccattcagctttacagagaaatggtagactatagtaga
acttacgaaaatgtaaaaactgagagttgcatccatcttctgagtgaggctcacttactg
gtcagagcagctataatggaccctcgtttcgttaaatcagaggagagagaagaactgatg
agagcgttcagagaaagttgtgctgccttaggagactgctacagcaggtgtgacacaaag
gattaccaccttgctttgccgtactacagaatgtcagggttatccatgactgacgtttta
aagagactagttttagaaggtgatgaaatgcaaacgtatgagaggggatttatattttac
ttaactcactctctgaatgaagacttaaatgaagaattaactaaggaatcagcaaacaga
gttctccgtatattctatcatgctgaccctgtgcagctgcctcatatcctctgcagcccc
tgcatgagaaacacgtgtcctttgacagctctgaagtatcttcagaaagtagaacatgtt
atgccatcggtggtcctgacgcttactaaggctttcatggctctgaaaatgggagacctg
acgatgtacgaacgtgagatggactcctataaggagacagtactggcttgtggctttgtt
gggcaaccgaaactcttgatacagcgtaaggaaggaattgttacgccaaccgagtttgct
gttcacctgaaggagatgcaccctggtttactagtggctgctactgtggctttacatgag
aacagtaaaatcgaactggaagaagcagatacctttttcaaggcgttgtgtagtaacagt
gaaaacgctgttcctcagctcttggtggatttctgggaagctcttcttgtagtatgctct
caggaggaaatacttcaggagcttttattgagggttacttctcagtatgtttggagaata
ctgaagaaagaacgtcctgagactaagccattgaaaacaacagaggatctgataaactcc
tgtaatcattttggattgattttcccgtgggtaacttccataatgtcagcaggatctcca
tctgataaagattaccgtgaagatatctcaagactacagtctcttttatgtagtcagtcc
atcaacatagcttcagctctgcctgtcttggagcctctggctgaggctgacggtgttggc
ctcgccatccacgttctgtgtagcacccgtctaggcaagtatgaggaagccattgaccag
cttcttcaaaggtgtcccagtgcagctgtagcgtatgctcagcacgagctgaaaggtgac
agtcgggctgtctggtggaacaagctgcttcctgaactttgcaagagaaccagacttact
ggaaatgactgccctgttcttatttcatcactgagagaaactttatcagttgttgcaatg
gaacttgaactaagggatttcctcagtcttgtaccagaggatgggactgcagcatttttc
ctgccccatcttcttcactgcagccagaggaagctgctgacctaa
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