Apaloderma vittatum (bar-tailed trogon): 104270721
Help
Entry
104270721 CDS
T08559
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104270721 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avit03021
]
104270721 (TAF5)
03036 Chromosome and associated proteins [BR:
avit03036
]
104270721 (TAF5)
Transcription machinery [BR:
avit03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104270721 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
104270721 (TAF5)
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
104270721 (TAF5)
STAGA complex
104270721 (TAF5)
TFTC complex
104270721 (TAF5)
SAGA complex
104270721 (TAF5)
SLIK complex
104270721 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
TFIID_NTD2
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
Tricorn_2nd
PEP5_VPS11_N
CDK5RAP3
Beta-prop_ACSF4
RAB3GAP2_N
eIF2A
VID27
Motif
Other DBs
NCBI-GeneID:
104270721
NCBI-ProteinID:
XP_009863455
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MPGHQGGCQVEPPSGGPPWGGRVLTRRLTRGVVSCCICASSFGPCHELLFNAHIFAVGGG
VVVEDQPDVSAVLSAYNQQGDPTLYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYL
ELVYNQHESEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRI
SRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDVMVGSLAGEAKREANK
AKVFFGLLKEPEFDVPLDDEDEEGENEEGKPKKKKPKKDSVGSKSKKQDPNAPPQNRIPL
PELKDSDKLDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGF
ADSTVRVWSVTPKKLRSVKTAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGT
SFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVA
RLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTIRLWDVLNGNCVRIFTGHK
GPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASG
SMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRN
LLLAAGAYSSQ
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgccggggcaccagggcgggtgtcaggtcgagcctccctcgggtggccctccctggggc
gggagagtacttactcgtcgccttactcgtggggttgttagctgctgcatatgtgctagc
tctttcgggccctgtcacgagctcttgttcaatgctcacatttttgcagttggaggaggt
gttgttgtggaagatcagccagatgtgagcgcagtgttgtctgcctacaatcagcagggg
gacccgacgctgtacgaggaatactacagtgggttaaaacacttcattgagtgttccctg
gactgtcatcgagcggaattgtcccagctgttttatcctctctttgtgcacatgtacttg
gaattggtctacaatcaacatgagagcgaagcaaagtctttttttgaaagatttcatggg
gatcaggagtgctattaccaggatgacctgcgtgtattatctagcttaaccaaaaaagaa
catatgaaaggtaacgagaccatgttggatttccgaacaagcaagtttgtgctgcgtatt
tcccgtgactcttaccaactcctgaagagacatctccaggaaaagcagaacaatcaaatc
tggaacattgttcaggaacatctttacattgacatctttgatggaatgcctcgcagtaaa
caacagatagatgtgatggttggaagcttggctggggaagcaaagcgagaggctaataaa
gcaaaggttttctttggcttattgaaagaaccggagtttgatgtgcctttggatgatgag
gatgaagaaggagaaaatgaggaaggaaagccaaagaagaaaaaacctaaaaaagatagt
gtagggtcaaaaagtaaaaaacaagaccctaacgctcctccccaaaacagaattcctctg
cctgaactgaaagactctgacaagctggataaagtaatgaatatgaaggaagctgcaagg
cgtgtgcgtcttggcccagagtgcctgccctccatctgtttctacacgttcctcaatgct
taccagggtctgactgcagtggatattacagatgactccagcatgatagtgggaggcttt
gctgactcgactgtcagagtgtggtctgtgactccgaaaaagctacgtagtgtgaaaaca
gcagcagacctcagtctcatcgacaaagaatcagacgatgtcttggagaggatcatggat
gagaaaacagcaagtgagttgaagattttatatggtcacagtggacctgtctatggcacc
agcttcagtcctgataggaactatctgttgtcctgttctgaggatggcactgtcagattg
tggagtcttcaaacattcacgtgtttagtgggatataaaggacacaactatccagtgtgg
gatacacagttctctccttacggctattactttgtgtcagggggacatgacagagtggct
cgtctgtgggcaacggatcactaccagccattacggatatttgctggtcatctcgctgat
gtgacgtgtacccgatttcatccaaactccaactatattgccacgggctccgcagacagg
actatacggctctgggacgttttgaatgggaattgtgtaagaatattcacagggcataag
ggaccaatacattcattggcattttctcctaatggacgattcctggctactggggcaaca
gatgggagagttctgctgtgggatattggacatggcttgatggttggagaattgaaaggg
cacactgatactatctacgcactcagattcagtagagacggggagattttagcatcaggt
tcgatggataacacagttcgtctgtgggatgctgtgaaggcatttgaagatttagaaacc
gatgactttactacagccactggacatataaacttgcctgaaaactcccaggacttgcta
ctgggtacctacatgaccaaatcaaccccggttgtgcatctccattttacccgcagaaac
ttgctgctggctgcaggagcctacagctcacagtaa
DBGET
integrated database retrieval system
