Apaloderma vittatum (bar-tailed trogon): 104270726
Help
Entry
104270726 CDS
T08559
Name
(RefSeq) neogenin
KO
K06766
neogenin
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04350
TGF-beta signaling pathway
avit04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
104270726
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
104270726
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
avit04515
]
104270726
Cell adhesion molecules [BR:
avit04515
]
Immunoglobulin superfamily
DCC/UNC5 family
104270726
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neogenin_C
fn3
Pur_ac_phosph_N
Fn3_VIN3
FN3_DSCAM-DSCAML_C
I-set
Ig_3
Interfer-bind
ig
Ig_2
fn3_2
TM_ErbB1
EphA2_TM
TMEM154
Herpes_UL74
Neur_chan_memb
FAM176
Motif
Other DBs
NCBI-GeneID:
104270726
NCBI-ProteinID:
XP_009863463
LinkDB
All DBs
Position
Unknown
AA seq
1138 aa
AA seq
DB search
PPVFLKRPANIYAHESMDIVFECEVTGKPTPTVKWVKNGDVVIPSDYFKIVKEHNLQVLG
LVKSDEGFYQCIAENDVGNAQAGAQLIILDLDVAIPTLPPTSLTSATNDHLAPATTGPLP
SAPRDVVATLVSTRFIRLTWRTPVSDPQGDNLTYSIFYTKEGINRERVENTSRPGETQVT
IQNLMPETVYVFRVVAQNKHGPGESSAPLKVATQPEVQLPGPAPNIRAYAGSPTSVTITW
ETPVSGNGEIQNYKLYYMEKGQDSEQDVDVAGLSYTINGLKKYTEYSFRVVAYNKHGPGV
STQDVVVRTLSDVPSAPPQNLTPEVRNSKSIMLHWEPPPAGTHSGQITGYKIRYRKVSRK
SDVTESIGGTQLFQLIEGLERGTEYSFRVAALTINGTGPATDWVSAETFESDLDETRVPE
VPSSLHVRPLVTSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLD
PSSHYVITLKAFNNVGEGIPLYESAVTRPHSDTSEVDLFVINAPYTPVPDPSPMMPPVGV
QASILSHDTIRITWADNSLPKNQKITDARYYTVRWKTNIPANTKYKTANATTLSYLVTGL
KPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPRTIIVNWQPP
SEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGM
GPMSEAVQFRTPKAESSDKMPNDQASGSAGKGSRPVDTGPDYKPPLGGSNSPHGSPTSPL
DSNMLLVIIVSVGVITIVIVVIVAVFCTRRTTSHQKKKRAACKSVNGSHKYKGNSKDVKP
PDLWIHHERLELKPIDKSPDPNPIMTDTPIPRNSQDITPVDNSMDSNIHQRRNSYRGHES
EDSMSTLAGRRGMRPKMMMPFDSQPPQPVISAHPIHSLDNPHHHFHSGSLASPTRSYLHH
QVNPWPIGTSMSHSDRANSTESVRNTPSTDTMPASSSQTCADHQDPESTTGSYLANTQED
DSAQNLPTAHVRPSHPLKSFAVPAVPPAGSTYDPALPSTPLVTQQAPNHPVHSVKTASIG
TLGRTRPPMPVVVPSAPDVQETTRMLEDSESNYEPDELTKEMAHLEGLMKDLNAITTA
NT seq
3419 nt
NT seq
+upstream
nt +downstream
nt
ttcctcctgtgtttctgaagcggcctgcaaatatctatgctcatgagtctatggacattg
tgtttgagtgtgaagtgaccggaaaaccgactccaactgtgaaatgggtcaagaatggag
acgtggtgatcccaagtgactatttcaaaatcgttaaagaacataatctgcaagttttgg
gcctggtgaaatcagacgaaggattctatcagtgcattgcagaaaatgatgttggaaatg
cccaggctggagcccagctgataatacttgaccttgatgttgccatcccaacattacctc
ccacttcactgaccagtgccactaatgaccatctagcaccagctacaacaggaccactgc
cttcggccccacgtgacgtcgtggccaccctcgtctccactcgcttcatcagactgacgt
ggcggacgcccgtatcggacccgcaaggagacaacctcacctattcaatcttctacacca
aggaaggtataaacagggaacgtgttgaaaatacaagtcgtcccggagagacgcaagtga
ccattcaaaacctgatgccagaaacagtttacgtctttcgggtcgtggctcagaacaagc
acggccccggagagagctcagcaccgctcaaggtggcaactcagcctgaggttcagctgc
ctggtccggctcccaatatccgtgcgtatgccggctcgcccacctcagtcaccatcacct
gggaaacgccggtgtctggcaacggggagatccagaactacaagctctattacatggaga
aggggcaggacagcgagcaggatgttgatgtagcaggactctcctacaccattaacggat
taaagaaatacacagagtacagtttccgagtggtagcttacaataaacacgggcctggag
tctccacccaagatgttgttgtacgaacgctgtcagatgtccccagtgctccaccacaga
atctaacgccggaggtacggaattctaagagcatcatgctgcactgggagccgcctcccg
cagggacacacagcgggcaaatcaccggctacaaaatccgctaccgcaaagtgtcccgca
agagcgacgtgacagagagcatcggtgggacccagcttttccagctgattgaaggtctag
agcgaggcaccgaatacagcttccgagtagctgccctgactattaacggtaccggaccag
ctaccgactgggtgtcagccgaaacctttgagagtgatctggatgaaacacgcgttcctg
aagttccaagctccttacacgtccgcccgcttgtcaccagtatcgtagtcagctggactc
cgcctgaaaaccagaacatcgtggtgagaggctacgctataggctatggcatcggcagtc
ctcacgcccagaccatcaaggtggactacaagcagagatattacaccattgaaaacttag
acccaagctcccactatgtcataactctgaaagcgtttaacaacgtgggtgaaggaatcc
ctctgtacgagagtgcagtgaccaggcctcactcagacacttccgaggttgatttgtttg
ttattaatgctccatacactccagtgccagatccgtctcccatgatgccaccggtgggag
ttcaggcttccatcctgagccatgacaccatacggatcacttgggcagacaactctctgc
cgaagaaccagaagatcacggatgctcgctactacacggttcgctggaaaaccaatattc
ctgccaacacaaagtacaagactgcaaatgccaccactttgagctacttagtgacggggt
taaaaccaaataccttgtatgaattctccgtgatggtgactaaaggtcgaagatcaagca
cttggagtatgacagcgcatggaacaacttttgaactagttcctacttctcctcccaaag
acgtgactgtggtgagcaaagagggaaaacctcggacgataattgtgaactggcagcctc
catccgaagccaatggcaaaattacagggtacatcatttactacagtacagatgtgaatg
ctgaaatacatgactgggtaattgaacccgtcgtggggaacaggctgacccatcagatac
aggaactgaccctcgatacaccgtattattttaaaatccaggcccgcaactcaaagggta
tgggacccatgtctgaggcagttcagttccgaaccccaaaagctgaatcctcagataaaa
tgcctaatgaccaagcctcagggtctgcagggaagggaagccgtccagtggacacaggac
cagattacaaaccgccactcggtggaagcaacagtccccatggcagtcctacttctccct
tggacagcaacatgctcctcgtgatcatagtgtctgttggagtgatcaccatcgtgatag
tggtgatagtcgctgtcttctgcacccgtcggacaacttcgcaccagaaaaagaaacgag
ctgcctgcaaatcagtgaatgggtcccataagtacaaaggcaactccaaagacgtcaagc
cccctgacctttggatccatcatgaaagactggagctaaaacccatcgataaatctccag
atcccaatccaatcatgacagataccccaatccctcgcaactcccaagacatcaccccag
ttgataactccatggacagcaatatccatcaaaggcggaattcctacagagggcatgagt
cagaggatagcatgtccacgctagcaggaagaagggggatgaggcccaagatgatgatgc
ctttcgattctcagccacctcagcctgtgattagtgctcatcccatccattcactcgata
accctcaccatcatttccactccggcagcctcgcttctccaactcgcagctatctccatc
accaggtcaacccgtggccgattggcacatccatgtctcattcagacagggccaattcca
cagaatctgttcgaaacacgccaagcacagacaccatgccggcttcctcgtctcagacat
gtgctgaccaccaggatcccgaaagcaccaccgggtcttacctggccaacacccaagagg
atgattcagctcagaacctccccacggcacacgtccggccatcccacccgctgaagagtt
ttgccgtgccggcagttccaccggctggttccacgtacgaccctgcgttgccaagcacgc
cattagtgactcagcaagctcccaaccatccagttcactcagtgaagactgcgtcgattg
ggactttaggaaggactcgtcctcctatgccagtggtagttcccagtgcccccgatgtgc
aggagaccaccaggatgcttgaggactcggaaagcaattacgaaccggatgagctgacca
aagagatggcccacctggaaggacttatgaaggaccttaatgccatcactacagcatga
DBGET
integrated database retrieval system
