Apaloderma vittatum (bar-tailed trogon): 104270799
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Entry
104270799 CDS
T08559
Symbol
NFRKB
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor related to kappa-B-binding protein
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104270799 (NFRKB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
avit03036
]
104270799 (NFRKB)
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
104270799 (NFRKB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
104270799
NCBI-ProteinID:
XP_009863567
LinkDB
All DBs
Position
Unknown
AA seq
1303 aa
AA seq
DB search
MDSLEQMLTDPLELGPCGEGHGTRIMEDCMLGTTRVSLPEDLLEDPEIFFDVVSLSTWQE
VLTDAQRDHLKKFLPHFPENNREHQNKLISALFSGENFRFGNPLHIAQKLFRDGHFNPEV
VKYRQLCLKSQYKRYLRSQQQYFYRLLKQILASRNHLLDLARKGGPDMTLRRKRFSSTYD
AEERDRRTHRRYLKILREVKEECGDTTLSSDEEDLSSWPPSSPARCPSPPVPLRVIPTLS
TLDMKTADRIELGESDLKMMLRKHHEKRKRQPDHPDLVTTDLTLEDIMTRVNAGRKGSLA
ALYDLATLKKKVKEKEDKKKKKLKIVKSEVEDLADSLSNVDGISSLSQDPSPIPLASVKE
EPLEELKPCLGINEISSSFFFLLLEILFLEGPATLSVLEDKILDWQSSPASALNNWFSFA
PNWSELVLPALQYLTGDSRDVPSSFSPFVEFKEKTQQWKLLGSWQDHEKELAALFQLWLE
TKDQTFFKENEDSSDATTPIPRVRTDYVVRPSTGEEKRVFQEQERYRYSQPHKAFTFRMH
GFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEIC
ELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSEEEFER
IHQAQAAAAKAKKALQQKPKPPAKMKSSSKESAVKALPSSASEPSQLSLSDSSMPPTPVT
PVTPTAPALPATPISPPPVSVVSKSVSSAGSEPAKPSQSVLLVSSPTMPQLGTLLSXFQP
APQPPPTRVVSHTTSSGLPQVRVVTAQSSLPAVSQQAPVVTQQQQPTSVPQIRVPATATP
TKVLPQAVMTLPVKAQTSPVQVQRPGSSVTGQTGITVTGLSAAPSPAVKPVTSSPGSSAT
SPSSTTVIQNVAGQNIIKQVAITGQLGVKTQPGSGIPLTATNFRIQGKDVLRLPPSSITT
DAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFTAAAGSSAGGKGISATLHVTSNPVQAA
DSPAKTSTATSASSSPAGSTVVKVTPDLKTAEPTGSAFRLMPALGMTVADQKSKTITTAP
STEAKPAATIRIVQGLGVMPPKAGQTITVATHAKQVPSSSAVSVAGAVHTSAVSLPTVSA
TVSKAVAVASGAAGTPITLGTGATAVRQVPVSTTVVSTSQAGKVPARITVPLSVISQPVK
GKSVVTAPIIKGNLGANLGGLSRNIILTTMPAGTKLIAGNKPVSFLTAQQLQQLQQQGQA
TQVRIQTVPASHLQQGTVSGSTKAVSTVVVTTAPSPKQTQDQL
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atggactcgctggagcagatgctgacggacccgctggagctggggccctgcggggaaggc
catggcacacgcatcatggaggactgcatgctgggcaccaccagggttagcctgcccgag
gacctcctggaggaccccgagatcttctttgacgtcgtcagcttgtctacgtggcaggag
gtgctgacagatgcgcaacgagaccacctaaagaaattcctgcctcactttcccgaaaac
aaccgagagcatcagaacaaactcatctccgcgttgttcagcggggaaaacttccgtttt
ggaaacccactgcacatcgctcagaaactcttccgagatgggcactttaatcctgaagtt
gtgaaataccggcagctctgtttaaagtcgcagtacaaacgctacctgcgctctcagcag
cagtatttctaccgactgctcaagcagatcctcgcttcccgcaaccacttgctggattta
gccaggaagggaggccctgatatgaccctaaggagaaagcgcttctcctcgacgtatgac
gcggaagaacgagacagacggacacaccgtcgctacttgaagattctgagggaagtgaag
gaggagtgtggagataccaccttgtcttctgatgaagaagatctaagctcctggcctcca
agttcgccagcacgttgtccaagtccaccggttcccttgagagtgatccccacgttgtca
accttggacatgaaaacagcagacaggatagaacttggggaaagtgatttgaagatgatg
ttgaggaaacaccatgagaaacgaaaacgtcagcctgaccaccccgatctggtgacgaca
gacttgactcttgaggacattatgactcgagtaaacgctggcagaaaaggttccttagca
gccttatacgaccttgcaaccctcaagaaaaaggtgaaggaaaaagaagataagaagaaa
aaaaagctgaagatcgttaaatccgaggtggaagatttggctgactcccttagcaacgtg
gatggaatctcctcgctctctcaggatccttcccccatccctctggcgtccgtcaaagag
gaacctcttgaagagttgaagccgtgccttggaataaacgaaatctcttccagctttttt
ttccttcttttggagatactctttctggaaggacctgctactctctctgtgctcgaagat
aaaattctagattggcaatcttctcctgccagtgcactaaataactggttctcctttgcc
cctaactggtctgaactggttttacctgccttgcagtacttgacaggtgacagcagagat
gttccttccagcttctcgcctttcgttgaattcaaggagaaaactcagcagtggaaattg
cttggttcttggcaagatcatgagaaggaactggcagcgctgtttcagctctggttggaa
accaaagaccagacttttttcaaagaaaatgaagacagctcagatgccacaacaccgatt
cccagagtaaggactgactatgtagttcgacctagcactggcgaggagaaacgtgtgttt
caggagcaggagcgttaccgttacagccagcctcacaaagctttcactttccgtatgcac
ggctttgagtcagtcgttggtcctgtgaagggggtgtttgacaaggaaacctcgttaaac
aaagcccgagagcattctctcctgcgctcagacagaccagcctacgtcaccatcttgtcc
ctcgttcgtgatgctgctgctcgccttcctaacggagaaggaactcgcgctgagatttgt
gagctgcttaaagattcccagttcctggctcctgatgtcacaagcgctcaggttaatact
gttgttagcggtgctttggatcgattgcattatgagaaagatccctgtgtgaaatacgat
attggacgcaagttgtggatctacctgcaccgggacaggagtgaggaagagtttgaacgg
attcaccaggctcaagctgctgcagcaaaggccaagaaagcccttcagcagaagccgaaa
cctccggctaaaatgaagtctagcagcaaggagagtgctgtgaaagcactccccagcagc
gcatcagagcccagtcagctgagcctcagcgactccagcatgccaccgactcccgtgact
cccgtgacaccaactgcaccagcgttgccagcaacaccgatttcacccccgccggtgtct
gtggttagcaagagcgtctccagtgccgggtcggagccagcaaaacccagccaaagcgtt
ctcctggtgtcgtcccctaccatgccacagctcgggacgttgctttccnatttccagccg
gccccacagccacccccgacgcgggtggtaagtcacaccacctcctcgggactgccccag
gtccgggtggtcactgcccagtccagcctccctgccgtgtctcagcaagccccggtggta
acccagcagcagcaacctacgtcggtgcctcaaatccgcgtcccagctacggccacgcca
accaaagtgctccctcaggctgtgatgactctgccagtaaaagctcaaaccagcccagtg
caggtgcaaagaccaggaagctccgtgacgggacagacgggcatcacagtgacaggactg
tctgcagcgcccagtccggctgtaaaacctgtaaccagctctccgggcagttctgccacg
agcccctcctctaccactgtcatccagaacgtagccggtcagaatatcatcaagcaggtg
gcgattaccggacagctgggcgtgaagacccagcctggcagcggcatcccgctcaccgcg
accaattttcggatccagggcaaggatgtgttgcgccttcccccgtcctctatcactaca
gatgccaagggacagactgtgctgcggatcaccccggacatgatggccacgctggccaaa
tcgcaagtcactaccgtcaaactgactcaggacctcttcacagcagctgcgggaagcagc
gccggggggaaaggcatctctgcaactttgcacgtgacgtccaatcctgtccaggctgcc
gattctccagccaagaccagcacggccacttctgcttcttccagcccagctggaagcacg
gtggttaaagtgacacctgacttaaagactgcagagccaacaggctccgctttccgcctc
atgcccgctctgggcatgaccgtggcggatcagaagagcaaaaccataacgacggcgcca
tccacggaggccaaaccggctgccacgataagaatcgtgcaggggctgggggtgatgcct
cccaaagccgggcagactattacggtagcaactcacgctaagcaagtgccctcttcctcg
gcagtgagcgtggccggcgctgtccatacctcagctgtctctttgccaaccgtgagcgcc
accgtgtccaaagcagttgccgtggcctcaggagctgctgggactcccataactttaggc
acgggagccacggctgtgcggcaggtccccgtcagcaccactgtagtgtcgacatcccag
gcgggtaaagtaccggcgcgaataacggtgccgctgtcggtgatcagccagccggtgaaa
ggcaagagtgtggtgactgcgcccatcatcaagggcaacctcggggccaacctcggcgga
ttaagtcgaaatatcatcctgactacaatgccggcggggacaaaactgatcgctgggaac
aagccagtgagttttctgactgcacagcaactgcagcagctgcaacagcaaggccaggcc
acacaggtgcgaattcaaacggtaccagcctcccatctccagcagggaacagtatctggc
tctactaaagcagtttccactgtggttgtgacaacggctccatctccgaaacagacccaa
gaccagctgtga
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