Apaloderma vittatum (bar-tailed trogon): 104270830
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Entry
104270830 CDS
T08559
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03013
Nucleocytoplasmic transport
avit05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104270830 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104270830 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avit03019
]
104270830 (NUP98)
03036 Chromosome and associated proteins [BR:
avit03036
]
104270830 (NUP98)
Messenger RNA biogenesis [BR:
avit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104270830 (NUP98)
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104270830 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
104270830
NCBI-ProteinID:
XP_009863604
LinkDB
All DBs
Position
Unknown
AA seq
1553 aa
AA seq
DB search
MFNKSFGTPFGGSTGFGTTSTFGQNAGFGTTSGGAFGTSAFGSNNNTGGLFGTTQTKPGG
LFGSTTFNQPATSSTSSGFGFGTSAGTSNSLFGTTSTGGGLFSSQNNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGGST
NINTKHQCITAMKEYESKSLEELRLEDYQANRKGPSNPVGAGAAAGLFGSSTATSSTATG
LFGSSTTNTGFSYGQNKSAFGTSTTGFGTGTTGGLFGQQSQTTSLFNKPFGQATTTQNTG
FSFGNTTLGQPNTNTMGLFGVTQPSQPGGLFGTAGSTNAGTGFGTGTGLFGQANTGFGVG
GSTLFGNKPAGFGTTTTSAPSFGTTTGSGLFGFGANTAGNSLFGNKPATGTLGTGLGTGF
GTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGFGAPQPAVALTDPNASAAQ
QAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPA
TRVRPKALQSAGSAKSHLFDGLDDDEPSLSNGAFMPRKSIKKLVLKNLSSSNLFSPVSRE
NEDLASPSEYPENGDRFFLSVPPDENHRQDDEREEEDNHHEVTRFYTNPIAKPIPQTPEN
TVLKHQNSVDDTIVALNMRAALRNGLEGSSEDASFHDDSLQDEREEETETVHQLHPAGIV
LTRAGYYTIPSMEELARFTNDRNECIVTDFTIGRKGYGSIYFEGEVNLTNLNLDDIVHIR
RKEVIVYPDDERKPPIGEGLNRRAEVTLDGVWPTDKTSRCLIKSPERLAEMNYEGRLESV
SRKQGARFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEHPSKVDTKKLKTTPVPPPGHL
PPQQMTLNGKPTPPSQTPEVEQLGRVVELDSDMADITQEPPQESVVEDNLMEEQEAVPAS
THIASTLGINPHVLQIMKASLLADEDDLDLILDHYPGKQPAKMDTSQEICSPRLPISKSQ
GQKRYSVGGLLQSKFADVIFQPPSAALQEFKGLRTSNSPPSDARWTSPLASAFPVPPSVP
EVQMKTVGVRRQQGLVALEKSITYGKGKLLMDMALFMGRSFRVGWGPNWTLVNSGNRLSG
SSEMEDLQCESVEYRFLPTPVAPKSLLESSFKVHVEKLNLEQRKMERDKQLYLIPLEIKL
KHSTVHMDEHCPLLAPNPGVSAIHDYADWVRKASEDPAVIETVVKHWCLAWTLCEAIWGN
LKELEASLEEPSEYILALERRKAFSRWLSETAAGRIEEEVSLSRHSNHIEAVFSCLTGKR
IGEACRLAQQSGDHRLALLLSQLAGSQPVRDLLTMQLVDWHRLQADCFIQEDRLRIFALL
AGKPVWQLSERISINVCSLLDWKRCMAVHLWYLLPPTASISKALAVYESAFQNTPECEKY
ACCPLPPYMEESGYVIEDDSNAGRPLRDVCFHLLKLYSDRHYDLDQLLDPRSVTSDPLDY
RLSWHLWEVLRALNYTHLFKHSQGVLNASYAAQLESEGLWEWAVFILLHEPDI
NT seq
4661 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcctttggaactccatttggaggcagcaccggctttgggacaacttca
acttttggacaaaatgctggctttggtactacaagtggaggagcatttggaacatcagcc
tttgggtcgaacaataatactggaggcctcttcgggactacgcagacaaaaccaggagga
ttatttggctcaactacatttaatcagccagccacctcctccacaagcagtggctttggg
ttcggaacatcagctggaacatcaaatagcttgtttggaactaccagcactggtggaggc
ctcttttcatcccaaaataatgcctttgcgcagaataagccagcagggtttggaaacttt
ggaactagtaccagcagtggaggtctctttggaaccactaatactacttccaatccgttt
gggagtacatcaggctctctgtttggcccgactagtttcactgctgctcctactggcaca
actattaagtttaatccaccaactggtacagatacgatggtaaaatctggaggtagcact
aacatcaataccaaacaccaatgtattaccgctatgaaagaatacgaaagcaaatctctt
gaggaacttcgtttagaagactatcaggcaaataggaaaggaccctcaaaccctgtagga
gcaggagcagctgcaggcttatttggctcttctactgctacgtcaagtactgctacagga
ctttttggctcttcaactactaacacaggcttttcatacggacagaataaaagtgctttt
ggaaccagtacgactggctttggaacaggaacaaccggaggtctttttggtcagcaatct
caaactacaagtctctttaacaaaccatttggtcaagccacaacaacacagaacactggc
ttttcttttgggaataccactctagggcagccaaacacaaacacaatgggtctctttggg
gtaacccagccctcgcagcctggaggcctttttggaacagctggcagcacaaatgctggt
actggatttggaaccggaactggtctttttggacaagctaacacaggatttggtgttggc
ggttcgaccctgtttggtaacaagcctgctggatttggaaccaccacgaccagtgctcct
tcgtttggtacaaccacgggcagcgggctctttggttttggtgccaacactgctggaaat
agtttatttggaaataagcctgcaactgggactctgggaactggccttgggacagggttt
ggaacagctcttggggcaggacagacatctttatttggaaacacccagcctaaacttggt
gggacactgggaacaggagcatttggagcaccaggattcaatacttcaacagccactctg
ggttttggagcccctcagcctgctgtagccttgacagacccaaatgcatcagctgcccag
caagctgttcttcagcagcatctcaatagcttgacttactcaccctttggagattctcca
ctcttcagaaaccccatgtcagacccaaagaagaaagaagagaggctgaaaccaacaaac
ccagcagctcagaaggccttaacgacacctacccactacaaactgactccacgtccagca
acaagagtgcgaccaaaagctttacagtcagctgggtctgctaaatctcatctttttgat
ggtcttgatgatgatgaaccatccttgtccaatggtgccttcatgccaaggaagagcatc
aaaaagctggttttgaagaacctcagcagtagcaatctgttctcgcctgttagtcgtgaa
aatgaagacctggcttctccctcggaatatccagagaatggagatcggttctttttgtca
gtacctcctgatgaaaaccacagacaagatgacgagcgagaggaggaggacaatcaccat
gaagtgactaggttttacaccaaccctattgccaagcccatcccacagacccccgagaac
actgtgctcaaacaccagaacagcgtggacgataccatcgtggctctgaatatgcgggca
gccttgcgaaatggtctggaaggtagcagtgaagatgcttcatttcatgacgattctctt
caggatgagcgtgaagaggagacagaaactgtgcatcagctgcatcctgcaggaattgtt
ctaacaagagctggctattacaccatcccatccatggaggaactggctagatttaccaat
gacagaaatgaatgtattgtgacagacttcaccataggccgcaaaggttatggatcaatt
tactttgaaggagaagtgaatctaactaacttaaatttggatgacattgtacatattcgt
agaaaagaagttattgtttaccctgatgatgaaagaaaaccacctattggtgaaggttta
aatagacgagcggaagttaccttagatggagtctggcctacagataaaacatctcgttgc
ctgataaaaagccctgaacgactggcagaaatgaattatgaaggtagactagagtctgta
tctcgtaagcagggtgctcggttcaaggagtaccgcccagagactggatcctgggtgttt
aaggtggcacacttttccaagtatggcttgcaagattccgatgaggaagaggaagagcat
ccttcaaaagtggacacaaagaagttaaaaacgacacctgtgccacccccggggcatctg
ccaccccagcaaatgaccctaaacgggaagccaacgcctccatctcagactccagaagtg
gagcagcttggcagagttgtggaactggacagtgatatggcagacatcacccaggagcct
cctcaggagtctgttgtagaagataacctgatggaagagcaggaggcggtgcctgcttcc
actcacatagcctcaacgctgggtattaacccccatgtcctgcagattatgaaagcttcc
ctgcttgctgatgaagatgacctagatttgatcctggatcattatcctgggaagcaacct
gcaaaaatggatacttctcaagagatctgttctccacggctccctatttcaaagtcacaa
ggacagaaaagatactcggttggtgggctgctgcagtcaaaatttgctgatgtaattttc
caaccaccaagtgctgctctgcaagagttcaagggactgagaacttcgaacagcccccct
tctgatgcccgttggacttctccgttagcatctgcattccctgtacctccatcagttcct
gaggtacagatgaaaacagttggtgtccgcaggcagcaggggcttgtagctctggaaaag
tccatcacctatggaaaagggaagctactgatggatatggcactcttcatggggcgctca
tttcgtgttggctggggacccaactggacgcttgtcaattctggaaatcggttgagtgga
tcaagtgaaatggaggatcttcagtgtgagtctgtggaatacagattcctgccaactcct
gttgctccaaaatcgcttttagaatcctctttcaaggttcatgtggagaagctgaattta
gaacaacggaagatggagagagacaaacagctgtatctcatccctctggagataaagctg
aaacacagcactgtccatatggatgaacactgtcctcttctagctcccaacccaggagtt
tcagctattcacgactatgctgactgggttaggaaggcgtctgaggatcctgctgtgata
gaaactgttgtgaagcactggtgcttggcctggactttatgtgaagcaatttgggggaac
ttgaaggagttagaggccagcttggaggaacccagtgaatacatcctggccctggagcgc
aggaaagccttctctcgctggctgtcggagactgctgcaggacggattgaggaggaagtt
tctttgtcccgacacagtaatcacatagaggctgtgttcagctgccttactgggaagaga
attggtgaagcttgcaggctggcacagcagtcgggcgaccaccgtctggccctgctgctc
tctcagctggctggcagccagcctgttcgggacctcctcaccatgcagctggtggactgg
cacaggctgcaggccgactgcttcatccaggaagacagactgcggatctttgctctgctt
gcgggaaagcctgtgtggcagttatcggagcgaataagtatcaatgtgtgctcactgctg
gactggaagcgttgcatggctgtccatctctggtacctgctgcctccaacagcttctatt
tccaaggcacttgctgtgtacgagtcagcgtttcagaatacaccagagtgcgaaaaatat
gcctgctgtcctctgcctccttacatggaagagtctggttatgtaattgaagatgacagt
aatgcaggaagacctctgagagatgtctgtttccatctgttaaagctctacagtgacagg
cactatgatcttgaccagctgctggaccccaggagtgtgacgtcagaccctctggactac
cgcctcagttggcacctgtgggaagtgctcagagccctgaactatacccatctcttcaag
catagccaaggagtgctgaatgctagctatgctgcccagcttgaaagcgaagggctttgg
gaatgggctgtttttatactgctgcatgagcctgatattca
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integrated database retrieval system
