Apaloderma vittatum (bar-tailed trogon): 104270900
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Entry
104270900 CDS
T08559
Symbol
COPB1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
avit04131
]
104270900 (COPB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
avit04147
]
104270900 (COPB1)
Membrane trafficking [BR:
avit04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
104270900 (COPB1)
Exosome [BR:
avit04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
104270900 (COPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
104270900
NCBI-ProteinID:
XP_009863712
UniProt:
A0A091N822
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKLKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPSHERVLQDLVMDILRVLTTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAAADV
LEFVREAIQRFDNLRPLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGELKPEEEVSVGPAQKLVTEMGTYATQSALSSSRPAKKEEDRP
PLRGFLLDGDFFVAASLATTLTKIALRYVSLVQEKKKQNSFIAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEK
RNVTVQPDDPISFMQLTAKNEMSSKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNIVDLNEYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIHLGPEAPVTGHIRIRAKSQGMALSLGDKINLSQKKTSL
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgcagagaatgtgtgttacacgctaatcaacgttccgatggattcagaacca
ccttctgaaatcagcttaaagaatgacctagaaaaaggagatgtcaagttgaagactgaa
gccttgaagaaagtaatcattatgattctgaatggtgaaaaactacctgggctgctgatg
accatcatacgttttgtactgcctctgcaagatcacaccatcaaaaaactgctgcttgtc
ttctgggagatagtgccaaagaccactccagatggcagacttttgcaggaaatgatcctc
gtatgcgatgcgtacagaaaggatcttcagcacccaaatgaatttatccgaggctccact
ctccgttttctttgtaagctgaaagaagcagaactgttggagcctttgatgccagccatt
cgtgcgtgtctagagcatcgtcacagctacgtgcgcagaaatgcagtgcttgcaatttac
acaatttatagaaattttgaacatcttatacctgatgctccggaattgattcatgatttc
ttggtgaacgagaaagatgcaagctgcaaaagaaatgcatttatgatgctaattcatgca
gatcaggatcgagctttggattatttgagtacctgtattgaccaagtccagacatttggt
gacatactgcagttggttattgttgaattaatttataaggtctgtcacgcgaatccttcg
gagagagctcggtttattcgctgcatttacaacttactgcagtcctcgagtcctgcagtg
aagtacgaagcggcaggtactctagttacgctctccagtgcaccgacagcaatcaaggca
gctgcccaatgctacatagatttgattattaaagaaagtgataataatgtgaaactgatt
gttttggatcggttgattgaattaaaggagcatccctcccatgaacgagtgttacaggat
ctagttatggatatcctcagagtgttgactaccccagatctagaagtgcgcaaaaaaacc
cttcagctggctctggatcttgtctcttcaagaaatgtggaggagcttgttattgttctg
aagaaggaagtgattaaaactaataacgtgacggagcacgaagatacagacaagtacaga
cagctgcttgttcgtacattgcattcctgtagtgttcggtttccagatatggctgcgaat
gttattccagtgctcatggaattccttagtgacaataatgaagcggcagctgctgatgtc
ttggagtttgtgcgggaagcgatccagcgatttgataacctccgacctcttattgttgag
aagatgcttgaagtctttcatgccattaaatctgtcaagatttatcgaggagctttgtgg
atccttggagaatattgcagcacaaaggaggatatacagagtgtaatgacagaagttcgc
cgatcgcttggagagatcccaatagtagaatctgaaatcaagaaagaagctggtgagcta
aaacctgaagaagaggtgtctgtgggtccagcccaaaaattggtgacagagatgggcact
tatgcaacacagagtgctctcagtagttcccgaccagccaaaaaggaagaagacagacct
ccattacgaggattcctgcttgatggagatttctttgttgcggcttcgcttgctacaact
ttaacgaagattgctttgcgctatgtgtctctagttcaggaaaagaagaagcaaaattcc
tttattgctgaagctatgctgctcatggccacgattctccatttgggaaagtcctctctt
cccaagaagccaattacagatgatgatgtcgatcgtatttccctgtgtctgaaagttttg
tcggaatgttctcctctcatgaatgatattttcaacaaagagtgcaggcagtccctttct
catatgctgtcagctaagctagaagaggaaaaactttcgcagaagaaagaatctgagaag
aggaatgtgacggttcagccagacgatcccatttccttcatgcagcttactgctaaaaat
gaaatgagctcgaaggaagaccagttccagcttagccttcttgcggcgatgggaaacacg
cagaggaaagaggctgctgatcctcttgcgtccaaacttaataaggttactcaactgacg
ggtttctcggatcctgtctatgcagaagcgtatgtccacgtcaatcagtatgacattgtg
ctagatgtgcttgtggtcaaccagaccagtgacacgctgcagaactgcacgctcgagctg
gccacgctcggtgacttgaaacttgtggaaaaaccatctcctctgacacttgctccacat
gatttcgcaaacattaaagctaatgtcaaagtcgcttcaacagaaaatggaataattttt
ggtaatattgtgtatgatgtctctggagcagccagcgacagaaactgtgtggttctcagt
gatattcacattgacatcatggattacatccagcctgcttcttgcacggatgcggagttc
agacagatgtgggcagaatttgagtgggaaaacaaagttacagtcaatacaaatatcgtt
gatctaaatgaatacttacagcacatactgaagtccaccaatatgaagtgcttgactcca
gagaaggcactttctggttattgtggctttatggcagccaatctttatgcacgttccata
tttggagaagatgcacttgcaaacgtcagcatcgaaaagccaattcatcttggaccagag
gcacctgtcactggtcacatacgaatccgtgcaaagagtcagggaatggccctgagtctt
ggagataagatcaatctgtctcagaagaaaacaagtttataa
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integrated database retrieval system
