Apaloderma vittatum (bar-tailed trogon): 104270933
Help
Entry
104270933 CDS
T08559
Symbol
FUBP1
Name
(RefSeq) far upstream element-binding protein 1
KO
K13210
far upstream element-binding protein
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avit03019
]
104270933 (FUBP1)
03041 Spliceosome [BR:
avit03041
]
104270933 (FUBP1)
Messenger RNA biogenesis [BR:
avit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
104270933 (FUBP1)
Spliceosome [BR:
avit03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104270933 (FUBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
KH_KHD4_2nd
Secretin_N
KH_PARP10_1st
Motif
Other DBs
NCBI-GeneID:
104270933
NCBI-ProteinID:
XP_009863758
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
IAAKIGGDAGTSMNSNDYGYGGQKRPLEDGDQPDAKKVAPQNDSFGNQLPPMHQQQRSVM
TEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAK
RLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVM
IQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVPIPRFAVGIVIGRNGEM
IKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPG
GRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP
PNADPNMKMFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVVPGPHGPPGPPG
PGAPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQPPNPPDPGKPGTDPNSAA
WAAYYAHYYQQQAQPPPAAPPGGPATTQTNGQGDQPNPAPAGQVDYTKAWEEYYKKMGQA
VPAPAGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQGQ
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
attgcagcaaaaattggaggagatgctggtacatcaatgaattcaaacgactacggttac
ggaggacaaaaaagacctcttgaggatggagatcaaccagatgctaagaaagttgctcct
cagaatgactcttttggaaatcagctaccaccgatgcatcaacaacaaaggtctgtgatg
acagaggaatacaaagttccagatgggatggttggattcataatcggcagaggtggagaa
cagatctcacgtatacagcaggaatctggctgtaaaatacagattgcacctgatagtgga
ggcctgcctgaaagatcatgtatgctaactggaacaccagagtctgttcaatcagcaaaa
agattactagatcagatagttgaaaagggacgacctgcacctggctttcatcatggtgat
ggacctggaaatgcagtccaagaaattatgattccagcaagtaaagcaggattagttatt
ggaaaaggtggagagacaattaaacaattacaggagcgcgcaggtgtcaaaatggtcatg
attcaagacggtccccagaatactggtgcagacaagccccttaggataacgggtgaccct
tataaagttcagcaagccaaggaaatggtgctggagttaattcgtgatcaaggtggcttt
agagaggttccaataccacgatttgctgtaggtattgtaattggaagaaatggagagatg
ataaaaaagatacaaaatgatgctggtgttaggatccaatttaagccagatgatggaaca
actccagatagaattgcccaaatcacagggcctcctgacagatgtcagcatgctgcagaa
attattacagatctccttcgaagtgttcaggctggtaatcctggtggaccaggacctggt
ggtcgaggaaggggtagaggccaaggcaactggaacatggggcctcctggtggattacag
gaattcaattttattgttcccactggcaaaactggattaatcattggcaaaggtggtgag
actattaaaagcataagccagcagtctggtgctagaatagaacttcagagaaatcctcca
cccaacgcagacccaaacatgaagatgtttactatccgtggaacaccccagcaaatagat
tatgcacgacaacttatagaagaaaagattggaggtccagtaaatccattgggcccacct
gttccccatggacctcatggtgttgttcctggcccacatggacctcctggcccaccaggt
cctggtgctcccatgggaccatataacccagctccttacaatcccgggcctcctggccct
gcccctcatggtcctccagctccgtatgctccgcaaggatggggaaatgcttatccgcat
tggcagccaccaaatccaccagatccaggtaagccaggaactgaccccaattcagcagcg
tgggcagcttattatgctcactactatcagcagcaagcacagccgccacccgcagcccct
cctggtggaccagctacaacccaaaccaacggacaaggagatcagccaaacccagcacca
gcagggcaggttgactataccaaggcctgggaggagtactacaaaaaaatgggtcaagca
gttcctgcccctgccggggctccgcccggtgggcagcctgattacagcgcagcgtgggcc
gagtactaccggcagcaggcggcgtactatgcccagacaagtccacagggaatgccacaa
caccctccagcaccacagggccaataa
DBGET
integrated database retrieval system
