KEGG   Apaloderma vittatum (bar-tailed trogon): 104271039
Entry
104271039         CDS       T08559                                 
Symbol
RBBP4
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
avit  Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03082  ATP-dependent chromatin remodeling
avit03083  Polycomb repressive complex
avit04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:avit00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    104271039 (RBBP4)
   03083 Polycomb repressive complex
    104271039 (RBBP4)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    104271039 (RBBP4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:avit03036]
    104271039 (RBBP4)
Chromosome and associated proteins [BR:avit03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     104271039 (RBBP4)
  Histone modification proteins
   HAT complexes
    HATB complex
     104271039 (RBBP4)
   HDAC complexes
    Sin3A-HDAC complex
     104271039 (RBBP4)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     104271039 (RBBP4)
    PRC2.2
     104271039 (RBBP4)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     104271039 (RBBP4)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    104271039 (RBBP4)
  Chromatin remodeling factors
   NuRD complex
    104271039 (RBBP4)
   NuRF complex
    104271039 (RBBP4)
   NuRF complex (fruit fly)
    104271039 (RBBP4)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 CAF1C_H4-bd Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_RFWD3 ANAPC4_WD40 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st Beta-prop_RIG_1st eIF2A MIOS_WD40 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 104271039
NCBI-ProteinID: XP_009863887
LinkDB
Position
Unknown
AA seq 390 aa
MTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDA
SHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYT
KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK
VVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE
VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILAS
SGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSE
DNIMQVWQMAENIYNDEDPEGSVDPEGQGS
NT seq 1173 nt   +upstreamnt  +downstreamnt
atgacccatgctctggaatggcccagcttgactgctcagtggcttcccgacgtaacaaga
cctgaagggaaggatttcagtatccaccggttggtcctgggcacccacacttcagatgaa
caaaaccacctggtgatagcgagcgtgcagttgcctaacgacgatgcgcagtttgatgct
tcacactatgacagtgagaaaggagagtttggaggctttgggtcagttagtggaaaaatt
gaaatcgaaatcaagataaatcacgagggagaagtgaacagagcgcgttacatgccgcag
aacccgtgcatcatcgctacaaagactccgtccagcgatgtcctcgtctttgattacacc
aaacacccttcgaaaccagacccttctggagagtgtaaccctgatctgcgtcttcgtgga
caccagaaggaaggttatgggctgtcgtggaacccaaacctgagtgggcatttgcttagt
gcttctgatgatcatactatttgcttgtgggatattagtgctgttccaaaagaaggcaaa
gtggtggatgcaaagaccatcttcacggggcacacagcggtggtggaagatgtatcttgg
cacctgctccatgaatcgcttttcggatccgtcgctgatgatcagaagctcatgatttgg
gatactcgatcaaacaacacctccaaacccagtcattcagtggatgctcacacagccgaa
gtcaactgcctctctttcaatccctacagcgagtttatcctggctacgggatcagctgat
aagactgttgcgctatgggacttgaggaacctaaaactgaagttgcactccttcgaatcg
cataaagatgaaatatttcaggttcagtggtctcctcataatgaaactatattggcctcc
agtggcactgaccgcagactaaatgtttgggacttgagtaaaattggagaagagcaatcc
cctgaagatgctgaggatggtcccccagagctgttgtttattcatggtggtcatactgca
aagatctctgatttctcctggaatcccaatgaaccctgggtaatttgttctgtatcagaa
gataatatcatgcaagtctggcaaatggcagagaacatctataatgatgaagaccctgaa
ggaagcgtggatccagaaggtcaaggatcctag

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