Apaloderma vittatum (bar-tailed trogon): 104271050
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Entry
104271050 CDS
T08559
Name
(RefSeq) uncharacterized protein LOC104271050
KO
K14416
elongation factor 1 alpha-like protein
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104271050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avit03019
]
104271050
Messenger RNA biogenesis [BR:
avit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104271050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBS1_N
GIP1_N
Motif
Other DBs
NCBI-GeneID:
104271050
NCBI-ProteinID:
XP_009863899
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MTRKSAWVRLNPTFFSLVKPKSLSAQCNSSKSLVVFSSNFEDDDVYGQSVEDDYCISPST
AAQFIYSRRDKPTTFAEPLEEEYGYEGTGDAADYFTSSHQLTEVDRARLNSCLDQMREVL
AESVPEQTMVQAVLDSKFDVQKALDLVLSQGSKQNVKTKNENAVIVGKTTKEMCIDTDSF
SYAVENVADNTSKPGFGYLTTQSSLDYCSLITNDKMLLNAEKSHIPSSERKGMKSSSLVL
SSSFGDDLFKGSFCEPVNKQAENRLPESANALNSIPDSEDVYFSIGSNPSGNSSSKKLEF
KETQDLKSLLMQSAVSDSLSPEDSIPLVSSNTSDCNSNANFDRPPCLTSALGKLALGNEV
SHAINKENELLENFCSLVQSRKQESLPSDRAALPVFRSGSTSLADLLREHQEGSTSHCYS
LADLYTESTGSLTDRKLGNSLLSELVSQPLTSGGMPELTGSLSSLAVSKVSPPKEVENLS
LSDLIAETIEIDKTQQRTDFPMLGVTESRPSKRTNIDLSVLVKNAVVPAEQNVVAQSNIF
SPETKLVKEEQGKCSDFVKTNKKPKRGLTPKRQDLSLSWIKALRARPSAFALTLCLRYPP
KSYKRRAISVHKAFLYSRQVQEEKPKEAGPIIAITPFDFKSASPDDIVKANQKKAFTRE
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgactcggaaatcggcctgggtgcgattaaaccccaccttctttagtcttgtaaagcct
aaaagcttgtctgcccagtgtaactccagcaagtcgttggtggtgttcagctctaatttt
gaagatgatgatgtgtatggccaatcagtagaagatgattattgcatttctccttcaaca
gcagctcaatttatctactccagacgagacaaaccaacaacatttgcggagccattagaa
gaggaatatggctatgaaggtacaggtgatgctgctgattattttacatccagtcatcag
ttgactgaagttgatagagcccgtcttaattcatgccttgatcaaatgagagaagttttg
gcagagtctgtaccagagcaaacaatggtgcaagcagtactggatagtaaatttgatgta
cagaaggctttggatcttgtactttcacaaggcagtaagcagaatgtgaagaccaagaat
gagaatgctgtgattgtaggaaagacgacaaaagaaatgtgtattgatacagacagcttt
tcttatgcagtagaaaatgttgctgacaacaccagcaaacctggatttggatacttgaca
acccaaagtagtttagattattgctctttaattacaaatgacaaaatgctccttaatgct
gaaaaatcccatataccttcatctgaaaggaagggaatgaaatcctcttcacttgttctg
tcgtcttctttcggtgatgatttgtttaaaggatcgttttgtgaacctgtgaataaacag
gcagagaatcggctaccagaaagtgctaatgcattaaattcgattcctgacagtgaagat
gtttactttagcataggaagtaacccatctggaaattcttcttctaagaagttggaattc
aaggaaacacaagacttgaaatccttgctgatgcagagtgcagtttctgattctctgagt
cctgaagacagcattcctcttgtttcctcaaatacttctgattgtaatagtaatgcaaat
tttgaccgtcctccatgcttaacaagtgctttaggaaaattggctcttggtaatgaagtc
agtcatgctataaataaagagaatgaacttcttgagaatttttgttcacttgtgcaaagt
agaaaacaagaaagcctcccttcagacagggctgctttgccagtgtttaggtctggaagt
acatcattggctgatttactgcgggagcaccaggaaggcagcactagccactgctactct
ttggctgatctttatactgagtcaacaggaagtctcactgataggaaattggggaactca
ctgttatcagaactagtaagtcaacccctgacttcaggtgggatgccagagctaacagga
tctttgtcttctcttgccgtctctaaagtttctcctccaaaggaggttgagaatttatca
ctctcggatttaatagcagagactattgaaatagataaaacgcaacaaaggacggacttc
cccatgcttggtgtaactgagtcgaggccctctaaaagaacaaatattgatttaagtgtt
cttgtaaaaaatgcagttgtacctgcagaacaaaacgtggtggcgcagtcaaatatcttc
agccctgaaacaaaacttgtaaaagaagaacagggaaagtgttcagattttgtcaaaaca
aataaaaaacccaagagagggcttactcctaagaggcaggatttgtccctttcgtggata
aaggcgctgcgcgcaagaccttcagcttttgctttaaccttgtgtctccgttaccctccc
aaaagttacaagcggcgtgcaattagtgtacataaagctttcctgtacagtagacaagta
caagaagaaaaacctaaggaagctggtcctataatagccataacgccatttgacttcaaa
tcggcatctcctgatgatattgtgaaagctaaccaaaaaaaggcttttacaagagagtag
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