Apaloderma vittatum (bar-tailed trogon): 104271102
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Entry
104271102 CDS
T08559
Symbol
AFF1
Name
(RefSeq) LOW QUALITY PROTEIN: AF4/FMR2 family member 1
KO
K15184
AF4/FMR2 family member 1
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avit03021
]
104271102 (AFF1)
Transcription machinery [BR:
avit03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
104271102 (AFF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
THD_CWZF3-5-7
DUF7392
Motif
Other DBs
NCBI-GeneID:
104271102
NCBI-ProteinID:
XP_009863985
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
GGGFLKHIRPSLSLVQNHASEFCIKDVLEMTHSWPPPLTAIHTPSSTAEPSKFPFPTKDS
QFVESVAQTHKQYDAPSKTLPSSQPGTSMLHDDLQLSDSEESSDEQVVEKSPSSLAPPSA
LQSQPKSVASAHSSSWKSGSTSDSDSSSDSETESSSSASEANDPPTASAPEPDPPISNKW
QLDNWLNKVNPPAVPAESLSDIAHEDGREKGKEQGQGVSSSSSHQXEPQEPHRKCCSPAA
RAPQDAHLLSKRHCQTSPVRAEEPSPRQTVGSKRPGKAPVHEGPRRGLEVESSDPGAFRV
RDRSSRDKPKVKTKGKPKCSITEDLKPALQEHSEKKRHKSSHQASAKPASDPKPVRDVLL
GSSQEPLALSPLPQGQGTSPTSTSSYKAAIVAREDFQEEKLPLPVEEKLLSPVTDSPACE
PLIVKIHLPLLSRVPQPPRKGSCKKRAEAKEFPGVKKQDLESKTMDTVDKCLQKRKREVE
KDIGRKKMKSEKGTKAVQSPANKDSHKLKAPKASCENQKKDVLLPAPLSPMSAAHPSPKL
NKKAQKRLVSESGELPPTDNTARNKSNHKDPLFSKHKKVERNHAELLRDVKGSAGNVTNP
FPEPSLPNGASKPRRPLLKLEKQHPIEYYMEEAKKLKHKADAMTDKTGKAFQYLDAALSF
IEYGIALESDSSAPKSAYSIFSDTIDLLKFIMTLKSFMDSSASAREKVFAVLCMRCQSIL
HMAMFQYKKDTAMKYSRVLNEHFKNSSRATQARSPCVARSTDMPSPLSPMPSPAGSVSSQ
PGSNAGNCSGNNVGSSVTVPSNIPSITSSYINITSYILYACDIWEHADAVSRKNKEFFDE
LSTATCTLALNSSLTQLVHYVRRGLQWLRLETNTP
NT seq
2629 nt
NT seq
+upstream
nt +downstream
nt
aggaggaggattcctaaagcacatcaggccgtctctttctttggttcaaaaccacgcgtc
ggagttctgcatcaaagatgtcttggaaatgacccactcctggccacctcccttgacagc
gatccatacgcctagtagtacagccgagccttccaaatttccgttcccgacaaaggattc
gcagtttgttgaatccgtagcacagactcacaaacagtatgacgcaccttcaaaaacgtt
gcctagttctcaaccaggaacatcaatgctccacgacgacctgcagctcagtgatagtga
agagagcagtgacgaacaagttgttgaaaagtcaccttcttcacttgctcctccaagtgc
gctacagtcccagcccaagagtgtggcatcagcacattccagcagctggaagtcagggag
caccagtgactcagacagctcttcagactcagagacagagagcagctcaagtgccagtga
agcaaacgaccctccaacagcatcagcacctgagcctgacccaccaatttctaacaagtg
gcagcttgacaactggctaaacaaggtgaacccaccggcagtgccagcagagagtctcag
tgacatcgcccacgaggatgggcgtgagaagggcaaggagcaggggcagggcgtcagcag
cagctcctcacaccagngggagccgcaggagcctcatcgtaagtgctgcagcccagcagc
cagggctcctcaggatgcgcatcttctgtccaaacgccactgccagacgtctcctgtgcg
cgctgaggagccctcccccaggcagaccgtgggtagcaaaaggcccggcaaggccccggt
gcacgaggggccgaggcgaggcctggaggtggagagtagcgaccctggtgctttcagggt
cagagaccggtcttccagagacaagccaaaagtcaaaacgaaagggaagccgaaatgcag
catcacagaagacctgaagccagccctgcaagagcactcagagaagaaaaggcacaagag
ctcccaccaggccagcgccaaacctgcctcggaccctaagcctgtgagagacgttttgct
tggcagtagccaggagcctctcgctctcagtccccttcctcaaggccagggcacaagccc
caccagcactagcagctacaaggctgccatcgtggccagagaggattttcaggaggagaa
acttcccttgcctgtcgaggagaagttgctctcaccagtaaccgactcccctgcctgtga
gcccctcatagtgaaaatccatctccctctcctgtcaagggtcccccagccacctcggaa
agggagttgcaagaagagagcagaggccaaggaattccctggtgtaaagaagcaggactt
ggagagtaaaactatggacactgtggacaagtgtcttcaaaagaggaagagagaagtgga
gaaggatattggtagaaagaaaatgaaatcagaaaaaggaacaaaagctgtgcagtctcc
agctaataaagattctcataaattgaaagcaccaaaagcctcatgtgaaaaccagaagaa
agatgtcttgttacccgcaccactgtcaccaatgtctgctgcacatccttcaccaaagtt
aaacaagaaggcccaaaagagactcgtgagtgagagcggcgagctgcctccgacagataa
cactgccaggaacaagagcaaccacaaggatcctttattctccaagcacaagaaagtgga
gagaaatcatgctgagctgttgagggatgtcaaaggatctgcggggaatgtcacaaatcc
tttcccagaaccttcattgccaaatggtgcctccaagccaaggagacctctcctcaagct
tgaaaaacagcatccaattgagtactacatggaagaggccaagaagctgaagcacaaagc
tgatgcaatgactgacaaaactggaaaggcctttcagtacctagatgctgctctttcctt
cattgaatatgggattgccttggaatcggattcatcagcaccaaaatcagcctacagcat
tttcagtgacaccatagatctcctcaaattcatcatgacattgaaatccttcatggactc
ctcagcatctgcacgtgaaaaagtctttgccgtgttatgcatgcgctgccagtccattct
gcacatggcaatgttccagtacaaaaaagacactgcgatgaagtattccagggtcctgaa
tgaacacttcaagaattcttccagagcaactcaagcacgttctccatgtgttgcaagaag
cacagacatgccttctcctctttctccaatgccctctcctgctggttctgtgagttctca
gccaggatcgaatgctggcaactgcagcggcaacaacgttggctcttcagttactgtccc
ctctaacatcccaagcatcacctcttcttacatcaacatcacttcctatatcctctatgc
ctgtgatatttgggaacatgctgatgcagtgtccagaaaaaataaggagttttttgatga
actcagcacagcgacgtgcactctggcactgaacagcagcctgacccaactggtgcacta
cgtcagacggggtttacagtggctgagactggaaacaaatacgccttaa
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