Apaloderma vittatum (bar-tailed trogon): 104271149
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Entry
104271149 CDS
T08559
Symbol
SH3RF1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
avit01009
]
104271149 (SH3RF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
avit04121
]
104271149 (SH3RF1)
Enzymes [BR:
avit01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104271149 (SH3RF1)
Protein phosphatases and associated proteins [BR:
avit01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104271149 (SH3RF1)
Ubiquitin system [BR:
avit04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104271149 (SH3RF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
Motif
Other DBs
NCBI-GeneID:
104271149
NCBI-ProteinID:
XP_009864040
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
FNTAAKQLIELDKPSGSAVDSGEGTSGAAHNNSTQKHTDTKKNTKKRHSFTSLTMSNKSS
QSSQNRHSMEISPPVLISSSNPTAAARISELTGLSCSAPSQVHIGTTGLIVTPPPSSPVT
TGPSFTFPSEVTYQAALGNMNPPLPPPPLLSAAIIASASSGSQSTGVIQRPTSGSTEQVA
HLRPQTRPSVYIAIYPYTPRKDDELELRKGEMFLVFERCQDGWFKGTSMHTSKIGVFPGN
YVAPVTRTVTSASQTKVPMSTAGQTARVVTMVSPSTPSGTAQKLQGNGVAVNSSTVPTAV
VSAAHIQTSPQTKVLMHVTGQMTVNQARNAVRTVAAHSQERPTAAVTPMQAQSPTCLIPA
AVIIPHHSVASQQLQPQLPNSATYXXXXXXXXXXXTSVTAVNVTRSAVPLACAAASLNSP
NVAASSLEGEISGRTASAHPAAPASPESALAAGGNAAVGKADKDSKKEKKGLLKLLSGAS
TKRKPRLSPPASPTLEAEQAASELALQGAVGPEVPSAGSHSKAGSCLTDSEVSGLAQETL
HRKTSSLDSSIPIAPPPRQPCSSLGPVLNESRPLVCERYRVVVSYPPQSEAELELKEGDI
VFVHKKREDGWFKGTLQRNGKTGLFPGSFVENI
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
tttaacacagcagccaaacagctgatagaattggataagccctcaggttctgctgttgac
tctggagaaggtacctctggggcagcccacaacaattcaacccaaaagcacaccgatacg
aagaaaaacaccaaaaaacggcactcttttacctccctcactatgtccaacaagtcttca
cagtcttctcagaatcgccactcgatggagattagtcctccggtcctcatcagctccagc
aacccaaccgcagcagcccggataagtgagctgacgggactttcctgtagtgccccttct
caggttcatattggtactacagggttaattgtgactccaccccccagtagcccggtcaca
acagggccttcatttaccttcccatctgaagttacctaccaagctgctcttggtaatatg
aatcccccacttccgccaccacctcttttatctgctgcaatcattgcatcggcctcttct
ggatctcagtccacaggtgtaatacaaaggcccacatcgggatcaactgaacaagtggca
catttacgaccacaaactcgtccaagtgtgtatattgcgatatacccttacactcctcga
aaagacgatgaactggaacttcggaagggagaaatgttcttggtgtttgaacgctgtcaa
gatgggtggttcaagggaacttccatgcacacaagcaagattggtgttttccctggaaat
tatgtggctccagttacaagaacagtgacaagtgcatcacagacaaaagttcccatgtct
actgctggccaaacggcgcgagtggtaactatggtcagcccttccactcctagtggaaca
gctcagaagctccaggggaatggtgtggcagtgaactccagcacggtacccacagctgtg
gtttctgcagcacatatccagactagcccgcaaaccaaggtccttatgcacgtgacagga
caaatgacagtcaaccaggctcgcaatgcagttagaacagttgctgcacacagtcaagaa
agacctacggcagcagtcacgcccatgcaagcacagagtcccacatgccttattcctgca
gctgtgatcattccccaccactctgttgcctcccagcagctccagccccagcttccaaat
tctgctacttacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctacttccgtcacggct
gtgaatgtgacccgctcggctgtcccactggcatgtgcagcagcttctttgaattctccc
aacgttgctgcttcatctttggagggagaaattagtggaagaactgcaagcgctcaccct
gcagctcctgcatctccagagagtgctttagcagctggtggaaatgctgctgtcggtaaa
gcagacaaggacagcaagaaagaaaaaaaaggcttgctgaaactgctgtctggagcatcc
actaaacgtaagccccgattgtcacctccagcatcaccaacgctggaggctgagcaagca
gcctcagagttagccctgcaaggtgcggtcgggccagaagttccatcagcaggcagtcac
agcaaagctggatcctgtctcaccgacagcgaggtctctgggctggcacaggagacgctg
catcggaaaacaagttccctggattcctctattcccatagcaccgccacctcggcagcct
tgttcatcactgggtccagtcctgaatgaatccaggcctcttgtctgtgaaaggtacagg
gtcgtggtatcctatcctcctcagagtgaagcggaacttgaacttaaggaaggtgacatt
gtttttgtacacaaaaaacgcgaggatggctggttcaaaggcactctgcaacgaaacgga
aaaactggccttttccctggcagctttgtagagaatatttga
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integrated database retrieval system
