Apaloderma vittatum (bar-tailed trogon): 104271201 Help Entry 104271201         CDS       T08559                                  Name (RefSeq) usherin-like   KO K19636   usherin Organism avit  Apaloderma vittatum (bar-tailed trogon) Brite KEGG Orthology (KO) [BR:avit00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:avit03037]     104271201 Cilium and associated proteins [BR:avit03037]  Primary cilia and associated proteins   USH complex and associated proteins    104271201 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  fn3 Pur_ac_phosph_N Ig_DSCAM-DSCAML_C Galaxin_repeat Fn3_VIN3 Motif Other DBs NCBI-GeneID:  104271201 NCBI-ProteinID:  XP_009864107 LinkDB All DBs Position Unknown AA seq 2819 aa AA seqDB search MDHVNIAVDPEEQFFQYMEHFVSTQHMFSMVFSALIHPCFSTAPDGVMPPRLSSATPTSL QVVWSTPVRNNAPGAPSYRLQMRRRRSAGDILDLLSSPTASLQHRVGDLQPYTEYEMRVV ASNGYGNAYSNWTSMTTAEDKPGPLDPPLLLNVTARAASITWQHPLKPNGIITHYNIYQN GQLHATVLGTRSNCTVEDLDPYTVYVFQVEGCTSKGCSLSPVTPEIQTLPDAPEDIPAPE LYSDTPTSVVVSWQPPAQPNGLVENVTIERRVKGTEQISTVVTLPLSQPMSYIDQSTALS PWQRFEYRILMSTLHGGTNSSAWSEVTTRPSRPAGVQPPDVEALGPHSVKVSWKPPLIQN GEILNYEIRMPDPRIVIAGNSSSTLSHVVTNLIPYTNYLVTVIACSGGDGFLGGCTESLP TSMTTPSTVPQSVSPLSVTPISESFIAISWQPPLRPNGPHLRYELLRRKIQQPLASNPPE DLNLWHNIYSGTQWFYEDKGLSRYTTYEYKLIVHNEVGYTSSEEVIATTLAGLPEKGSIL IARAVNHTAVEVEWSKPTLQDLQGDVAHYILFLNSTDHGRSLRIQADVNSIVVGDLQPNT EYQLFFQVFNGAHSINSEVVHVTTSDGEPEGMFPPEVVIINSTAVRVIWTSPSNPNGVVT EYSIYVNNKQYKTGMNEPGSFLLADLSPFTVYDIQIEVCTVYACVRSNGTQITTVEDEPK HLSAPIIHVIGSRSLQINWSSPGQPNGIILGYELLRKVWQRCTPSKTPRNSKSSRTCISL ECKKHENICGKVCYDPALKVCCNGILHDNKPGFQCCEDKYIPFVLNSPGVCCGGQIHAVQ PKHQCCGGYYTRVLVGEVCCPNEEENRVSVGIGDSCCQGMPYSTSGNQICCGGYLHDSFN QQCCGREVISTDLVCCGDGEAGTAHRPLTGMFCCGQEYVNMSDTICCSGSSGEFLAHVRK NDQVPVKCCETELIPKSKECCNGVGYNPLKYVCSDKISAGMMMKVKEECQANILCPLSME ATAHCGKCDFDPRENICAWVKGVPSATEDQIKEGVCPAEEETVYTGSPNKYSFTDLNLEP FVTYEYRVAAWNSYGRGFSEISRAVTKQDVPQGVSPPKWTKVNNREDMILLNWEEPLQPN GLIIHYIILRNGIERFRGTEMSFTDTSGVQPYQEYSYQLRACTVSGCTDSRKVVAVTVQG VPESVQPPDVSALNSTALHLSWTAPKKPNGIIREYQIKGLIYTDAGSRMQYTVSGLQPYT NYSFVLTACTSAGCASSQPLSGQTLQAAPHGVWPKPHHIIVSSTEVEIYWSEPRKPNGLI TQYGLFRDGEQIFLGGSTDLNFTDVNLQPNNRYVYQLEASTWGGSNTSDKYVIQTPVRTP EKIHVPYNVTVIDAYSIFLAWDMPGMFIVGVPLEYNILLNATGPTPLVKSVGHTHFAFVD GLDPYTLYEIRVQACQDGGCGVGGQTYSRTAEAPPRDLSPPIVKAMGSALIAVKWAPPKK PNGIITNYFIHRRPVGSQHELLLFIWAEGPLEFIDASDALQPFTLYEYRARAQNTVGSVD SLWASTQTLEASPWGMGAPWAQATSAYSVRLNWTQPVSPNGVISLYRVVYQEKRSDPTFS IAPVTALTVLGTKHQAHLFGLKPFTTYHIHVVAVNNAGQVSSPWTSVRTLEASPSGLSNF TVEKKENGRALLLKWSEPSQPNGVIKTYNIFSDDNLEYSGLSRQFLFRRLEPYTLYTLVL EACNAAGCTHSPPQLVRTGEAPPVSQMAPVIQAVNATNVELTWLQPINPNGKIIRYEVIH RCAKESAAGYRATAEDEEIVFTEYNTESNAFIYNDKGLQPWTRYEYKIRTWNAAGYADSS WTVAKTSQTAPKGLAVPRLSLVSVNPRKVLISWASPAQPNGILQSYRLLKNDVLYPFSFD AATFNYTDEDLLPYSVYTYAIVACTMGGCSTSETAAIQTLEAAPALVDPPSLQAVSSTQI NASWAPPQIQNGDITKYILKLNNEEYYPGKNLQMLVSNLQPYTQYDFALVACTAGGCTSS ISQSVTTMEAAPLNMEAPKLLVMGSESIEITWKLPANPNGKITSYELRRDGVLVYSGQET RYLDFTLTPGMEYSYTVTANNSQGSVTSPAAQIKTNPSAPSGMLPPRLQAWSSKEILVAW DPPIKVNGDIKNYTISIHKPAETGKKTIDFDTSHVSFLRRSYIVAELQPYSRYEVQLQAC TELGCASSEWASVQTLEAPPAAQPAPLIEIQTTAGGFQLTSTILWTSPQKPNGRILYYEL YRRQTTQAHINLDLVLVYNGSSTSFRDDKLLPYTEYEYQVWSVNSAGRTPSSWSRCRTGP APPEGLGAPQFGTVASTVAVVNISPPLKPNGVVSIYRLFSNDTRGTDVVLSEGTATQQTI HGLKPFTTYSIGVEACTCFNCCSKGPMAQITTQPAPPSEQPPPQIRAVTSRNQGLGEWRL LINENPNLLLSYELHVYMACPLNLQPAAKACSPGPTEVKYTGNGQSANVSNLEPYTTYNL RVVSYNSVGSSASEWIGFTTEKEPPRYMAPFSVVSNLSTIHIDWSRTFVLNGRLKEYALT ESGQRIYSGFDTELYLPRTSDKTFLFQVTCITDEGSAVTPVIKYSAGDGLGLILTTPGEK DKADSKRAKFYNELWFAVLMVVLGLILLAVLLSLILQRKVHKQPYARDRPPLVPLQKRTS PMSVYSSGETHPGLEDTKIPGAGSPMSNRSVHITPGVRRPSQSQLSRTYSQASLHRSVSQ LLDLYDKKTLADEPPWDAIFRNHRTTGRGLYVDEEDLVNVIKGFSTVTKEHTTFTDTHL NT seq 8460 nt NT seq  +upstreamnt  +downstreamnt atggaccatgttaacattgctgttgatcctgaggaacagtttttccagtatatggagcat tttgtttctacccagcatatgttctccatggttttctctgctctaattcatccatgtttt tcgacagctccagatggcgtgatgcctccaaggctttcatctgccactccgaccagtctt caggttgtctggtctacaccagttcgcaacaacgcccccggcgcacccagctaccgactc cagatgcggcggaggcgttctgctggtgacattttagatttgctttccagccctactgct tccttacaacacagggttggagatcttcagccctacacggagtatgagatgagagtggtc gcctccaatggttacggcaatgcttatagcaactggacttcaatgactacagcagaggac aaacctggacctttagatccaccacttctgctgaatgttacagcaagggcagcaagcatc acctggcagcatcctttaaagccaaatggcattatcactcattataatatttaccaaaat ggccaactgcatgctacagtgctaggaactagatctaactgcactgtggaggacttggat ccttacactgtctatgtgtttcaggtagaaggatgcacttctaaaggatgctccctttca cctgtgaccccagaaatacagactcttccagatgcacctgaggatattcctgctccagaa ctgtattctgatactccaacttctgtggttgtgtcctggcaaccacctgctcagccaaat ggtctggtggaaaacgttaccatagaaaggagggtgaaaggaacagaacaaatatcaact gttgtgactctccctctcagtcagcccatgagctacattgaccagagtactgcgctgagc ccttggcagagatttgaatacagaatactgatgagcactcttcacggaggcacaaacagc agtgcatggtcagaagttaccactagaccatcaagacctgctggtgttcagccacctgat gtagaagcgttggggccgcattcagttaaggtctcatggaaacctcctctgatacagaat ggtgaaatccttaactatgagattcgcatgcctgatccacgaattgtcatcgctgggaac agttcatcaaccctaagtcatgtggtgactaatcttataccctatacaaactacttggtc actgtaatagcttgttctggaggtgatggctttctaggaggctgcacagagagtttgcct acaagcatgactacaccttcaacagttcctcagagtgttagtccattgtctgtgactcca atcagtgagtcctttattgccatttcttggcaaccaccactaaggccaaatggtcctcat ctgagatatgagctcctgagacgtaaaatccagcaaccacttgcatcaaatccccctgaa gatttaaatctgtggcacaatatttactcaggaactcagtggttttatgaagataagggt cttagcaggtacacaacatacgagtacaagctcatagtgcacaacgaggtaggatataca tcaagtgaagaagtgatagctactacattagcaggattaccagagaaaggaagtatcctc attgcacgtgctgttaatcataccgctgtagaagtggaatggtcaaaaccaacgctacaa gatctgcaaggagacgttgcacattacatcctcttcctgaattctaccgatcatggaaga tctctgaggatccaggctgatgtaaactctatagtcgtaggtgatttgcagcccaacaca gagtatcagctattttttcaagtttttaatggagcccacagcatcaacagcgaagttgtg cacgtgactacctcagatggagagcctgagggcatgttccctccagaggttgtcatcatc aacagtacagctgtacgtgtcatctggacatcgccttcaaacccgaatggtgttgtcaca gaatactctatctatgtaaataataagcagtacaagaccggaatgaacgagccggggtcc tttcttttagcagatttgtctccgttcactgtgtatgatatacagattgaagtctgcacg gtgtatgcctgtgtgagaagcaatgggacccagattacgactgtggaagatgagccaaag catctgtcagcacccattattcacgtaattggctcaagatctcttcagatcaactggtca tcaccaggacagccaaatggcatcatcctgggatatgaactcttacggaaagtgtggcag aggtgtactccatcaaagactccaaggaacagcaaaagtagtagaacgtgcatctcatta gaatgtaaaaagcatgaaaatatctgtggaaaagtatgttatgatccagcattgaaggtg tgttgcaatgggattctgcacgacaataaacctggcttccaatgctgcgaggacaagtac attccatttgttcttaattcaccgggggtttgctgtggtggtcagatacatgctgtgcaa ccgaaacatcagtgctgtggtggttattacactagggtgttagtaggagaagtatgttgc cctaatgaagaggaaaacagagtttcagttggaattggtgactcttgctgccaaggaatg ccttattccacatcaggcaatcaaatctgctgtggtggatacctgcatgacagtttcaat caacagtgttgtggtagagaagttataagcacagacttggtctgttgtggtgatggagaa gcagggactgcacacagacctctcacagggatgttctgttgtgggcaggagtacgtgaat atgtcagataccatatgctgctcaggttccagtggtgagttcctagcacatgttagaaag aatgaccaagtgccagtaaaatgctgtgagactgaacttattccaaagagcaaagaatgc tgtaatggagttggatataatcctttgaaatatgtttgctctgacaagatttcagctgga atgatgatgaaggtaaaagaagaatgccaagctaatatcctttgccctttatctatggag gcaacagcacattgtggaaagtgtgactttgatcctagggagaatatctgtgcatgggta aaaggtgtgccgagtgctacggaagaccagataaaggaaggtgtgtgtccagctgaagag gagactgtctacactggaagtccaaacaagtattcatttacagacctgaacctcgaacct tttgtcacatatgagtacagagtggctgcttggaatagctatggaagaggcttcagtgaa attagcagagctgtcactaagcaagatgtaccgcagggtgtaagtccgccaaaatggacc aaagtgaataatcgggaagacatgatacttctaaactgggaggaaccgcttcaaccaaat ggtcttattattcattatatcattctccgaaatggaatcgaacgttttagaggaacagaa atgagcttcacagacacaagtggtgtccagccataccaagaatattcataccagctgcga gcctgtactgtttctggttgcacagacagcagaaaggtagttgcagtcactgtccaagga gtcccagagagtgttcaaccaccagacgtcagtgctttgaactcgaccgcattacactta agctggactgctcccaagaaaccaaatggcataatcagagagtaccagattaaaggactt atatacactgatgctggaagcagaatgcaatacacagtatcaggtctgcagccatacact aattacagctttgtgcttactgcatgcacatctgctgggtgtgcttctagccaaccactt tcaggtcaaactttacaagctgctcctcacggggtatggccaaaacctcatcatatcata gtcagctcaacagaagtggaaatctactggagtgagccaaggaaacccaatggactcatt actcagtatggattatttcgtgatggagaacagattttcctgggtggcagtacagacctg aatttcacagatgttaacctgcagcccaacaatagatatgtttaccagctggaagccagc acttggggtggcagcaacactagtgataaatatgttatacaaacaccagtaagaacacca gagaaaatccacgtcccatataacgtcacagtaattgatgcatattctatattcctagct tgggacatgccagggatgttcattgtcggtgtgcctttggaatacaacatcttactaaat gcgactggtcccactccactggtgaagtcggtaggacacacacattttgcttttgtcgat ggcctagatccctacaccctgtatgagataagagtacaagcatgccaggatggtggatgt ggagtgggtggtcagacatattcaagaactgctgaagcacctcctagagacttgagccca ccaatcgttaaagcaatgggatctgcactcatagcagtgaaatgggcaccacctaagaaa ccaaatggcatcattactaactacttcattcacagacgtcctgtgggcagtcaacatgag ctgcttttgttcatctgggctgaaggacctttggaatttattgatgcatccgatgccctg cagccttttactctctatgagtaccgggccagagctcaaaatactgtggggtcagtggac agcctgtgggcttcaacccaaactctggaggcttccccatggggcatgggagccccttgg gcacaagcaacaagtgcatactcagtgcggttgaactggacccagcctgtgtctcccaat ggtgttatatctctatatcgagtagtctatcaagaaaaacgcagcgatccaacatttagc atcgcacctgtcacagcactaactgtactgggaacaaagcatcaggctcatttatttgga ttgaaacctttcacaacgtatcatattcatgtcgtagctgtaaacaatgctgggcaggtt tcaagcccctggacatctgtgcgcacgttggaagcttcacccagtggcctgagcaacttc actgtggaaaagaaagaaaatggcagggctctgctgctaaaatggtcagagccctcccaa cccaatggcgtgattaagacctacaatattttcagcgatgacaacctggagtacagtggt ttatctcgccagttcctcttcaggcgcctggagccgtacacgctctataccctggtgctg gaggcttgcaacgcggcaggctgcacccattccccaccccagctggtccgaacaggcgaa gcccccccagtgtctcagatggcacctgtaatccaggcagtgaacgccaccaacgtcgaa ctgacctggttgcagccaattaatcccaatggaaaaataatacgctatgaagttattcac agatgcgcaaaagaaagtgctgcagggtacagagcaacagcagaagacgaggaaatagtt ttcacagaatataacactgaaagcaatgcattcatatataacgacaaaggtttacagcca tggacaaggtacgaatataaaatacgcacctggaatgcggcaggctacgccgacagctcc tggacggtggcaaagacaagccaaactgccccaaaaggtcttgctgtccccaggttgtcc ttggtgtcagtcaacccccgtaaagttctcatctcgtgggcctccccagcacagcccaat ggtattcttcagtcatacagactgctgaagaatgatgttctctatcctttcagctttgat gctgctactttcaactacacggatgaagacttactgccttattcagtgtacacctacgcg atagttgcctgcacgatgggaggctgctccaccagtgaaacagctgcaatacagactctg gaagcagctcctgccttggtggacccaccgtctctgcaggctgtcagctccactcaaatt aacgcatcttgggcacctcctcaaatacaaaatggagatatcaccaagtacatactgaaa ttaaacaatgaagagtattatcccggcaaaaatttgcaaatgttagtttctaatctccag ccttacacacagtatgactttgcattggttgcctgcactgctgggggctgcacatctagt atatcccagtcagtgacaaccatggaggccgcaccactaaatatggaagctccaaagctc cttgtcatgggctcagagtcaattgaaatcacatggaaacttccagctaatcccaatggt aaaatcacaagctacgagctaaggagggatggtgtacttgtttactcaggtcaggaaacc cgatatcttgatttcacccttacaccaggcatggagtacagctacactgtcaccgcaaat aacagccaagggagtgtgaccagccccgcagctcagattaaaaccaacccctctgctcca tctgggatgttgcctcctaggttgcaggcatggtcctcgaaggagattttggtggcctgg gatcctcctatcaaagtaaacggtgacattaaaaattacacaatctcgatccacaagcct gctgaaacaggaaagaaaactattgactttgatacatcccatgtttcttttctgagacgg tcgtacatagtggctgagctacagccatacagcaggtatgaagtacagctccaagcttgc acagagctgggttgtgcctccagcgagtgggcatcggtacagacgctggaggcaccccca gcagcacaacctgcccctctcatcgaaatccagaccacagccgggggcttccagttgact tctaccatcctgtggaccagcccacagaagccaaatgggaggattttatactatgaactt tacagaaggcaaacgactcaagcccacataaatttagacctcgtgcttgtttacaatggt tcttcaacctccttcagggatgacaagttgctgccttacacagaatatgaatatcaggtg tggtcggtgaactcggcaggccggacaccaagcagctggtcccgctgccggacaggtcct gcccctcctgagggcctgggagctccccagttcgggacggtggcatccacagtggccgtg gtgaacatcagcccccctcttaagccaaatggggtggtcagtatctacagactgttttct aatgataccagagggactgatgtggtgctgtcagaagggactgccacccagcagacaata catgggctgaaaccttttaccacctactccattggcgtggaggcctgcacctgtttcaac tgttgcagcaaaggacccatggcccaaatcaccacgcagccagctccaccctcggagcag ccccctccgcagatccgcgccgtgacctccaggaatcaaggtttgggggagtggaggctc ttgattaatgaaaatcccaaccttcttctcagctacgagctccatgtgtatatggcttgt cccctaaacctacaaccagcagcgaaggcttgcagtcctggcccaactgaggtgaagtat acaggaaacggacagagtgccaacgtgtccaacctggagccttacacaacttacaacctg cgagtcgtgtcctacaactctgttggcagcagtgcctcagaatggattggtttcacgacg gaaaaggagccacctcggtacatggctccgttctctgttgtcagcaacttatccaccatc cacatagactggagtcgcacttttgtactgaacggccgcctgaaggagtacgcgttaact gagagtgggcagcgcatctacagtggctttgacaccgagctgtatttaccaaggacatct gacaaaacttttttgtttcaagtgacctgcatcaccgatgaagggagtgctgtgacgccg gtcatcaagtacagcgctggagatggacttggtctgatcttgacaacacctggagagaag gacaaagccgactccaaacgtgcaaaattctacaatgagttgtggtttgcagtgttgatg gtagttctaggtttgatcctcttggctgttcttctctcattaattcttcagaggaaagtc cacaagcaaccctatgcacgagacagacctcctttagttccactccagaaaagaacatca ccaatgagcgtgtactcatcaggtgaaacccatccaggcctggaagatacaaaaattcca ggagccggttctcccatgagcaaccgcagtgtccatatcacacctggggtaaggagacca agtcagagccagctaagtcgtacgtattcccaagcctctcttcatcgtagtgtgagccag ctgcttgacctctatgacaaaaagactcttgctgacgaaccaccctgggatgccattttt cgcaatcatcgcactactggtcgtggcttgtatgtagatgaagaagatcttgtcaatgtc atcaaaggcttcagcacagtcaccaaggagcacaccacattcactgacacccacctctga

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