KEGG   Apaloderma vittatum (bar-tailed trogon): 104271373
Entry
104271373         CDS       T08559                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
avit  Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:avit00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    104271373 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:avit03021]
    104271373 (TAF5L)
   03036 Chromosome and associated proteins [BR:avit03036]
    104271373 (TAF5L)
Transcription machinery [BR:avit03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     104271373 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     104271373 (TAF5L)
Chromosome and associated proteins [BR:avit03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     104271373 (TAF5L)
    STAGA complex
     104271373 (TAF5L)
    TFTC complex
     104271373 (TAF5L)
    SAGA complex
     104271373 (TAF5L)
    SLIK complex
     104271373 (TAF5L)
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd TFIID_NTD2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_WDR41 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_IFT140_1st NBCH_WD40 Tricorn_2nd Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR19_1st PEP5_VPS11_N PROPPIN Ge1_WD40 WD_LRWD1 eIF2A Mala_s_1-like Nbas_N
Other DBs
NCBI-GeneID: 104271373
NCBI-ProteinID: XP_009864322
LinkDB
Position
Unknown
AA seq 588 aa
MKRVRTEQIQMAVSCYLKRRQYVDSEGPLKQGLRLCQTAEEMAANLTVQSESGCANVVSA
APCLAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNMVQNGLKSTVDSFY
SRFHGMFLQNASQKDIIEQLQTTMTIQDILSNLKLRAFLDNKYVIRLQEDSYNYLLRYLQ
SDNNNALCKVLTLHIHLDVQPAKRTDYQLYASGSSSRNESNGLEPSDVPASILQNEAALD
LLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLRSR
KLKSEPHLVDVSHIRLACDLLDEEEEDDSAGTEMKILRGHCGPVYSTRFLSDSSGLLSCS
EDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLWTFDRTYPLRI
YAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGK
YLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRN
TYCNAPADGSSSELVGVYTGQMNNVLSVQFMACNLLLVTGIAQENQEH
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgaaacgcgtacgcacagaacagattcagatggcagtgtcctgctacctcaagcgccgc
cagtacgtggactcggaaggtcccctaaaacaagggctaaggctgtgccagactgctgaa
gagatggcagctaatctcacagtccaatctgaatctggttgtgccaacgttgtgtctgca
gctccctgcctggctgagccacagcaatatgaagtacaatttggacgattacgcaatttt
ctcacagattcagattctcagcacagccatgaagtgatgcctcttctgtatccccttttt
gtctacctccatctgaatatggtccagaatggcctaaaaagcacagtggacagtttttac
agccgcttccatggcatgttcttgcagaatgccagccagaaggatatcattgagcagttg
cagactaccatgactattcaagatatcctgtccaacttgaagctccgggcttttttggac
aacaagtacgtcatccgtcttcaagaggacagctacaactaccttcttcgctacctccaa
agtgacaacaacaacgccctgtgcaaagtcctgaccttgcacattcacctggatgtgcag
cccgccaagaggaccgactaccagctctacgccagtgggagctcctcgcgcaacgaaagc
aatggcctggaacccagcgacgtgccggcttccattctgcagaacgaggcggcgctggat
ttactgcaggacagcattaaacgtgtcaaggatgggcccccttccttaacaaccatctgt
ttctatgccttctataacacggagcagttgctgaacactgcagagatttcgccaaatagc
aagctgctcgctgctgggttcgataattcgtgtgtgaagctctggagcctgcgttccagg
aagttaaaatcggagccccaccttgtcgatgtgtcccacatccgcctggcttgtgacctc
ctggatgaggaggaagaggacgacagcgcaggcacagaaatgaagatcctaagaggacac
tgtggccctgtgtatagcacgaggttcctttcggacagttcgggactcttgtcttgttcc
gaggacatgtccatcagatactgggacctcggaagttttacaaacactgtgttgtaccaa
ggacatgcctaccctgtctgggatttggatattagcccctgcagcctgtacttcgccagc
gcttcccacgatcgcactgcgaggctctggacttttgatcggacgtacccgctgcgaata
tacgcaggccatttggcggacgtagactgtgtcaagttccaccccaattccaattacttg
gccacgggctccacggacaaaactgtgcgcttgtggagcacccagcaaggcaactcggtg
cgtcttttcactgggcaccgtggccccgtgctagcgctcgccttttctcccaacggtaag
tacctggcatcagccggtgaagaccagcggctaaagctgtgggacttggcgtcaggaact
ctttataaagaactgagggggcacacggacaacataaccagccttacttttagcccagac
agtagtttaattgcttcagcgtcgatggacaattcagtccgggtctgggacattcggaac
acttactgcaacgcgcccgcagatgggtcttccagtgaactggttggtgtatataccgga
caaatgaataatgtactgagcgtacagtttatggcctgcaatcttcttctagtgactgga
attgcacaagaaaatcaggaacattaa

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