Apaloderma vittatum (bar-tailed trogon): 104271462
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Entry
104271462 CDS
T08559
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104271462 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avit03019
]
104271462 (CSTF3)
Messenger RNA biogenesis [BR:
avit03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
104271462 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
104271462
NCBI-ProteinID:
XP_009864442
UniProt:
A0A091N8D7
LinkDB
All DBs
Position
Unknown
AA seq
708 aa
AA seq
DB search
AAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQFPSSGRFWK
LYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFA
LDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRD
YNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQNTPQEAQQV
DMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLA
EKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAI
EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALMEYYCSKDKSVA
FKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFL
AFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSGSELKALGYKDV
SRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPPGLHPVPGGV
FPVPPAAVVLMKLLPPPVCFQGPFVQVDELMEIFRRCKLPDTVDEAVRIITGGLPEIAVE
GNGPVENNAILNKAVKRPHEDSDDDEEKGSVVPPVHDIYRARQQKRIR
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
gctgctgaatatgtcccagaaaaagtgaagaaagctgaaaagaaactagaagaaaatcca
tatgaccttgacgcttggagcattctcattcgagaggcacagaatcaacctatagacaaa
gcacggaagacctatgaacgccttgttgcccagttccccagttctggcagattctggaaa
ctgtacattgaagcagagattaaagcaaaaaattatgacaaagtcgagaagttatttcag
cgatgccttatgaaggttttacacattgatttatggaaatgttacctttcatatgtacga
gaaaccaaggggaagctacctagttacaaagaaaaaatggctcaggcatatgattttgct
ctggataagattggcatggaaatcatgtcatatcagatctgggtggattacatcaatttt
ttgaaaggcgtagaagcggtaggatcttatgcagaaaaccagaggataacagctgtccgt
agggtttaccagcgtggttgcgtgaatccaatgataaacatagaacagctctggagagat
tataacaaatacgaagagggcatcaatattcacttagctaagaagatgattgaagacagg
agtagagattatatgaatgcacgacgtgtggcaaaggagtacgagacggtgatgaaaggg
ctggaccgcaacgctccctctgtccccccgcaaaatacgccccaggaggctcagcaggta
gacatgtggaagaaatacatccagtgggagaagagcaatcctctgcgtacagaagatcaa
acgctcataacaaaaagagttatgtttgcctatgagcaatgccttctggttctggggcat
cacccagatatctggtatgaggctgcacagtacctcgagcaatccagtaaattactggct
gagaaaggggacatgaacaatgcgaagcttttcagtgatgaggctgctaatatttatgaa
agagcgatcagcactttattaaagaagaatatgcttctttattttgcatatgcagattat
gaagagagtcgaatgaagtacgagaaagtgcacagcatatacaatcgactcctggctatt
gaagacattgatcccactctggtttatatccaatacatgaaatttgcaaggcgagcagaa
ggcataaaatctggaagaatgatatttaagaaagcaagagaggacacccggactcgacat
cacgtctatgttacagcagctttaatggagtattattgtagtaaggataagtctgtggcc
tttaagatctttgagctcgggctgaaaaaatatggggacattccagaatatgtcttggca
tatatcgactacctttctcaccttaacgaggacaataatacaagagttttgtttgaacgt
gttttaacttcagggagccttccacctgagaaatctggggaaatctgggctcgattttta
gcttttgaaagtaacattggcgatctagctagcatactgaaagttgaaaaacgaaggttt
acagcattcaaggaagaatacgagggtaaagaaacagctctgctggtagataggtacaag
ttcatggatttgtacccttgctctggcagcgaactgaaggcccttggttataaggatgtc
tcccgtgccaagctggcagctataattccagatcctgtggttgcaccttccattgtgcct
gttctcaaagatgaagtagacagaaaacccgaataccccaaaccagacactcagcagatg
attccgtttcagccaagacacttagcacctccaggtttacatcccgtcccgggtggtgta
tttcctgtcccaccagcagctgtagttcttatgaagctcctgccacctcctgtttgtttt
cagggtccctttgttcaagtggatgagctcatggagatatttagaagatgcaaactgcca
gacactgtcgatgaagccgtacgaatcattaccggaggcctacctgaaatagctgtggaa
ggcaacggacctgtagaaaataacgctatactcaataaggctgtcaaaaggccacatgaa
gattccgacgacgacgaggagaaaggatctgtagttccccctgtacacgacatttacaga
gcacgacagcaaaagagaatccggtga
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integrated database retrieval system
