Apaloderma vittatum (bar-tailed trogon): 104271594
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Entry
104271594 CDS
T08559
Name
(RefSeq) cytotoxic and regulatory T-cell molecule-like
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104271594
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
avit04515
]
104271594
04090 CD molecules [BR:
avit04090
]
104271594
Cell adhesion molecules [BR:
avit04515
]
Immunoglobulin superfamily
Nectin family
104271594
CD molecules [BR:
avit04090
]
Proteins
104271594
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
C2-set_2
V-set
C2-set_3
ig
Ig_2
C1-set
Izumo-Ig
DUF1180
Motif
Other DBs
NCBI-GeneID:
104271594
NCBI-ProteinID:
XP_009864612
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MTFARVLHVAALFLMQGDFPGHGSETVTLKEGEDLNLHCRLSGDGSSARQWLNPHNFTIF
INTLRALRDQRYKLIHSSKDELSIQLSNVTVHDEGEYNCFYYGIPFKSMNTTVEVLAAPS
NPVLEVSQDTERSITLSCYTQGCKPQSQITWLLNNGIELPGDSKHELEADGKKWTTVSTL
TVLAYGPNSTASCIVRHQALREKKLTASFQFKDLSRTGIAPSALEVHTPDNENSTGSKQP
AVPSAASEDPAVTSSASIQKNLQPDNTSAWSEVTPAAAKKEELTGSSYRVPSRTETAFYV
NVTEQELSRTEAPQPSENATGISIITFKPDLKSEGMKKENNLLLPVLVAALIFVLLVIVL
LFMRKLKKAYGVWKRENDVSEQTLESYKSKSNEDSLGHEKNGHVVSQKSNAQYVTEGHEE
TKHKNSGDKTAA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgactttcgccagggtgctacacgtcgcggctctcttcctgatgcaaggggattttcca
ggacatggcagcgaaactgtaactctaaaggaaggagaggacctaaatctccactgcagg
ctcagcggtgacggcagttctgcccggcaatggttaaaccctcacaactttaccattttt
atcaacaccctgcgcgctttaagagatcagaggtacaaacttatccattcttcaaaggat
gaattatccatccaactgtctaacgtaacagtgcacgacgaaggcgaatataactgcttc
tactatggcatcccattcaaaagcatgaacacgacggttgaggtgttagctgctccttct
aatccagtactggaagtatcccaagacacagaaagaagcattacattgtcttgctacact
caagggtgcaaaccacagtcccagattacctggctcttgaacaacgggatagagctccct
ggtgacagtaagcacgagttagaagctgatgggaagaaatggaccacagtcagcacgctg
accgtcctcgcctacgggcccaattcaacagccagctgcatcgttcgtcaccaagcacta
agagaaaagaagctgacagcatctttccagttcaaggatctctccaggacaggcattgcc
ccgtctgcgctcgaggtgcatacacctgacaacgagaattctacaggatccaaacaacca
gctgtgccttctgcagcatcagaggatccagcagttaccagctcagcatcaatccagaaa
aacctccaaccagacaacacatctgcttggtccgaagtgacgccagctgcagccaaaaag
gaagaactgactggttcgagttatcgtgtccccagcaggactgaaacagcattctatgtg
aacgtcacagaacaggaactttccaggacagaagctccgcaaccaagtgaaaatgcaact
gggatttccatcatcaccttcaagccagatctgaaatccgaaggcatgaaaaaggagaat
aatctcttgctgccagtcttggtggctgctctgattttcgtgctgctcgtcattgttctg
ctttttatgaggaagctgaaaaaagcttatggagtgtggaaaagagaaaatgatgtttca
gagcagacattggagagttataaatccaaatctaatgaagacagtctgggccacgagaag
aatggacacgtcgtcagtcagaaatccaacgcgcaatatgtaacagagggacatgaggaa
acgaagcacaagaattcgggagataaaaccgctgca
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